RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 IGLV4-3A0A075B6K6 122 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 A0A087WWV3 80 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 A0A1W2PR77 199 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 POP4O95707 220 aaKnown RBP1.67□□□□□ -2.14
LRCH3-209ENST00000452660 MYOGP15173 224 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 ALDH3A2P51648 485 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 PRELPP51888 382 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 CASP6P55212 293 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 SIRPAP78324 504 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 CDK3Q00526 305 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 BIRC3Q13489 604 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 ZNF74Q16587 644 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 ODF4Q2M2E3 257 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 XKR3Q5GH77 459 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 SLC35D3Q5M8T2 416 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 ELFN2Q5R3F8 820 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 TMEM198Q66K66 360 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 LCLAT1Q6UWP7 414 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 DEFB132Q7Z7B7 95 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 TMEM139Q8IV31 216 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 CSNK1G2-AS1Q8NCQ2 148 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 NPEPL1Q8NDH3 523 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 OR10G7Q8NGN6 311 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 C9orf43Q8TAL5 461 aaPredicted RBP1.67□□□□□ -2.14
LRCH3-209ENST00000452660 LRRC59Q96AG4 307 aaKnown RBP1.67□□□□□ -2.14
LRCH3-209ENST00000452660 DHX58Q96C10 678 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 ZNF486Q96H40 463 aaPredicted RBP1.67□□□□□ -2.14
LRCH3-209ENST00000452660 GAD1Q99259 594 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 CHCHD5Q9BSY4 110 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 KIFC3Q9BVG8 833 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 PANK2Q9BZ23 570 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 SH2D4AQ9H788 454 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 IL17BQ9UHF5 180 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 PGAP2Q9UHJ9 254 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 PA2G4Q9UQ80 394 aaKnown RBP1.67□□□□□ -2.14
LRCH3-209ENST00000452660 VSIG4Q9Y279 399 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 NTNG1Q9Y2I2 539 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 STRCP1A6NGW2 1772 aa1.67□□□□□ -2.14
LRCH3-209ENST00000452660 CUX1P39880 1505 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 SUPT6HQ7KZ85 1726 aaKnown RBP1.66□□□□□ -2.14
LRCH3-209ENST00000452660 K7EQD1 137 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 OR10H2O60403 315 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 SNAP91O60641 907 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 RSL1D1O76021 490 aaKnown RBP1.66□□□□□ -2.14
LRCH3-209ENST00000452660 TRUB2O95900 331 aaKnown RBP1.66□□□□□ -2.14
LRCH3-209ENST00000452660 ATP6V1B1P15313 513 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 CDH3P22223 829 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 RGS2P41220 211 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 RPL21P46778 160 aaKnown RBP1.66□□□□□ -2.14
LRCH3-209ENST00000452660 TUBP50607 506 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 CCR9P51686 369 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 ARSEP51690 589 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 PPP2R2BQ00005 443 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 DMPKQ09013 629 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 IKQ13123 557 aaPredicted RBP1.66□□□□□ -2.14
LRCH3-209ENST00000452660 MTF1Q14872 753 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 CRYMQ14894 314 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 FAM98BQ52LJ0 330 aaKnown RBP1.66□□□□□ -2.14
LRCH3-209ENST00000452660 SLC25A53Q5H9E4 307 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 SPECC1Q5M775 1068 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 CES4AQ5XG92 561 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 UGT3A1Q6NUS8 523 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 PP632Q6XCG6 107 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 NOL8Q76FK4 1167 aaKnown RBP1.66□□□□□ -2.14
LRCH3-209ENST00000452660 CHMP1BQ7LBR1 199 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 TEX11Q8IYF3 940 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 EID3Q8N140 333 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 C11orf45Q8TAV5 145 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 ZKSCAN4Q969J2 545 aaPredicted RBP1.66□□□□□ -2.14
LRCH3-209ENST00000452660 NECTIN4Q96NY8 510 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 LPAR4Q99677 370 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 TDRD1Q9BXT4 1180 aaKnown RBP1.66□□□□□ -2.14
LRCH3-209ENST00000452660 SHARPINQ9H0F6 387 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 S1PR5Q9H228 398 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 CHMP1AQ9HD42 196 aaPredicted RBP1.66□□□□□ -2.14
LRCH3-209ENST00000452660 UBN1Q9NPG3 1134 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 SERINC1Q9NRX5 453 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 PAG1Q9NWQ8 432 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 WSB2Q9NYS7 404 aaPredicted RBP1.66□□□□□ -2.14
LRCH3-209ENST00000452660 ZNF581Q9P0T4 197 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 B3GAT1Q9P2W7 334 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 C3P01024 1663 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 ABCA5Q8WWZ7 1642 aa1.66□□□□□ -2.14
LRCH3-209ENST00000452660 TDRD6O60522 2096 aaKnown RBP1.65□□□□□ -2.14
LRCH3-209ENST00000452660 ADGBQ8N7X0 1667 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 ABCC8Q09428 1581 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 ENO4A6NNW6 628 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 HEPACAM2A8MVW5 462 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 SHISA9B4DS77 424 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 H0Y9J4 135 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 TEX28O15482 410 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 TSPAN1O60635 241 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 PRAMEF11O60813 436 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 KRT6AP02538 564 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 KRT6BP04259 564 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 PRKAR1AP10644 381 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 PDHA2P29803 388 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 OXTRP30559 389 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 CSTF2P33240 577 aaKnown RBP eCLIP1.65□□□□□ -2.152e-7■■■■□ 24.2
LRCH3-209ENST00000452660 KRT6CP48668 564 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms