RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 BASP1P80723 227 aaKnown RBP4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 CBX1P83916 185 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 DR1Q01658 176 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 BNC1Q01954 994 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 ARHGAP1Q07960 439 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 DMPKQ09013 629 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 BST1Q10588 318 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 MAB21L1Q13394 359 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 PDIA5Q14554 519 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 MVPQ14764 893 aaKnown RBP4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 FAM98BQ52LJ0 330 aaKnown RBP4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 ZMAT1Q5H9K5 638 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 FAM76BQ5HYJ3 339 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 PCID2Q5JVF3 399 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 WLSQ5T9L3 541 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 PRAMEF5Q5TYX0 476 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 AGBL2Q5U5Z8 902 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 PRAMEF6Q5VXH4 476 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 LRRC66Q68CR7 880 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 CYB5D1Q6P9G0 228 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 TTC23LQ6PF05 361 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 SPATA31D4Q6ZUB0 917 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 VTCN1Q7Z7D3 282 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 CDR2LQ86X02 465 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 CIR1Q86X95 450 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 ECHDC2Q86YB7 292 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 CCDC60Q8IWA6 550 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 DSELQ8IZU8 1212 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 C1orf87Q8N0U7 546 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 LGI4Q8N135 537 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 ASCC1Q8N9N2 400 aaKnown RBP4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 SCAIQ8N9R8 606 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 MINDY2Q8NBR6 621 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 SRFBP1Q8NEF9 429 aaKnown RBP4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 OR52L2PQ8NGH6 319 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 FAM81AQ8TBF8 368 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 MYCBPAPQ8TBZ2 947 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 LKAAEAR1Q8TD35 194 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 TAS1R2Q8TE23 839 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 DQX1Q8TE96 717 aaKnown RBP4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 PAQR8Q8TEZ7 354 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 MAIP1Q8WWC4 291 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 ATL1Q8WXF7 558 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 SNX19Q92543 992 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 HAVCR1Q96D42 359 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 ZBED3Q96IU2 234 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 HARBI1Q96MB7 349 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 MUS81Q96NY9 551 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 FYTTD1Q96QD9 318 aaKnown RBP4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 DCLRE1CQ96SD1 692 aaKnown RBP4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 SEPHS2Q99611 448 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 ADAM2Q99965 735 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 TMEM47Q9BQJ4 181 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 ELOVL1Q9BW60 279 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 NUSAP1Q9BXS6 441 aaKnown RBP4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 NMNAT2Q9BZQ4 307 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 ADNPQ9H2P0 1102 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 RGCCQ9H4X1 137 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 PIGVQ9NUD9 493 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 RDH8Q9NYR8 311 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 VSX1Q9NZR4 365 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 PDP1Q9P0J1 537 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 VPS54Q9P1Q0 977 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 CRLS1Q9UJA2 301 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 SERTAD3Q9UJW9 196 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 PACSIN2Q9UNF0 486 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 DTX4Q9Y2E6 619 aa4.28□□□□□ -1.72
HMGB3P21-201ENST00000452483 AATKQ6ZMQ8 1374 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 PFASO15067 1338 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 ANKRD30BLA7E2S9 258 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 C12orf71A8MTZ7 269 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 GOLGA8TH3BQL2 631 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 ZNF701M0R085 212 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 TRDMT1O14717 391 aaKnown RBP4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 DSCR3O14972 297 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 POLR1CO15160 346 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 RNF13O43567 381 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 DFNA5O60443 496 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 B4GALT3O60512 393 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 ERN1O75460 977 aaKnown RBP4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 JRKO75564 520 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 SUN1O94901 812 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 LUC7L3O95232 432 aaKnown RBP4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 KNG1P01042 644 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 JUNP05412 331 aaKnown RBP4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 GLAP06280 429 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 RPSAP08865 295 aaKnown RBP4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 MYZAPP0CAP1 466 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 RRASP10301 218 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 FCER1AP12319 257 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 ANPEPP15144 967 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 HOXB9P17482 250 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 TGM2P21980 687 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 TKTP29401 623 aaKnown RBP4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 HOXC9P31274 260 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 RRM2P31350 389 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 ADRA1AP35348 466 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 ETV5P41161 510 aa4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 NSFP46459 744 aaKnown RBP4.27□□□□□ -1.73
HMGB3P21-201ENST00000452483 RGS4P49798 205 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms