RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 PGGT1BP53609 377 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 ADARP55265 1226 aaKnown RBP9.29□□□□□ -0.92
USP54-207ENST00000451492 DCDP81605 110 aaKnown RBP9.29□□□□□ -0.92
USP54-207ENST00000451492 GBX1Q14549 363 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 RBM20Q5T481 1227 aaKnown RBP9.29□□□□□ -0.92
USP54-207ENST00000451492 THEMIS2Q5TEJ8 643 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 ZNF385CQ66K41 422 aaPredicted RBP9.29□□□□□ -0.92
USP54-207ENST00000451492 FRMPD2BQ6IN97 320 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 RHBDD2Q6NTF9 364 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 TLDC1Q6P9B6 456 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 ZNF517Q6ZMY9 492 aaPredicted RBP9.29□□□□□ -0.92
USP54-207ENST00000451492 SHISA6Q6ZSJ9 500 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 ASB18Q6ZVZ8 466 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 UBE2R2Q712K3 238 aaPredicted RBP9.29□□□□□ -0.92
USP54-207ENST00000451492 PIWIL4Q7Z3Z4 852 aaKnown RBP9.29□□□□□ -0.92
USP54-207ENST00000451492 ADCK2Q7Z695 626 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 PCGF5Q86SE9 256 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 ANKMY2Q8IV38 441 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 MCATQ8IVS2 390 aaKnown RBP9.29□□□□□ -0.92
USP54-207ENST00000451492 TTC29Q8NA56 475 aaPredicted RBP9.29□□□□□ -0.92
USP54-207ENST00000451492 OR2L3Q8NG85 312 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 OR9A1PQ8NGU1 263 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 CD200R1Q8TD46 325 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.29□□□□□ -0.92
USP54-207ENST00000451492 SEC14L1Q92503 715 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 PDLIM2Q96JY6 352 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 GBP5Q96PP8 586 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 PKP4Q99569 1192 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 AARSD1Q9BTE6 412 aaKnown RBP9.29□□□□□ -0.92
USP54-207ENST00000451492 ING2Q9H160 280 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 SLC6A20Q9NP91 592 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 MRPS30Q9NP92 439 aaKnown RBP9.29□□□□□ -0.92
USP54-207ENST00000451492 FAM114A2Q9NRY5 505 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 SPATA7Q9P0W8 599 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 STOX2Q9P2F5 926 aaPredicted RBP9.29□□□□□ -0.92
USP54-207ENST00000451492 TAC3Q9UHF0 121 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 PCYOX1Q9UHG3 505 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 TRMT6Q9UJA5 497 aaKnown RBP9.29□□□□□ -0.92
USP54-207ENST00000451492 FBXO5Q9UKT4 447 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 SRPK3Q9UPE1 567 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 PADI2Q9Y2J8 665 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 MRFAP1Q9Y605 127 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 SAR1BQ9Y6B6 198 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 AP1M2Q9Y6Q5 423 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 MAU2Q9Y6X3 613 aa9.29□□□□□ -0.92
USP54-207ENST00000451492 A0A1W2PPV9 198 aa9.28□□□□□ -0.92
USP54-207ENST00000451492 PRICKLE3O43900 615 aaPredicted RBP9.28□□□□□ -0.92
USP54-207ENST00000451492 CTSVO60911 334 aa9.28□□□□□ -0.92
USP54-207ENST00000451492 CNOT3O75175 753 aaKnown RBP9.28□□□□□ -0.92
USP54-207ENST00000451492 ALOX12BO75342 701 aa9.28□□□□□ -0.92
USP54-207ENST00000451492 PSIP1O75475 530 aaKnown RBP9.28□□□□□ -0.92
USP54-207ENST00000451492 STATHP02808 62 aa9.28□□□□□ -0.92
USP54-207ENST00000451492 ATP5DP30049 168 aa9.28□□□□□ -0.92
USP54-207ENST00000451492 CMPK1P30085 196 aa9.28□□□□□ -0.92
USP54-207ENST00000451492 ELK3P41970 407 aa9.28□□□□□ -0.92
USP54-207ENST00000451492 PAFAH1B1P43034 410 aa9.28□□□□□ -0.92
USP54-207ENST00000451492 ITGA8P53708 1063 aa9.28□□□□□ -0.92
USP54-207ENST00000451492 PNLIPRP1P54315 467 aa9.28□□□□□ -0.92
USP54-207ENST00000451492 NKAIN1Q4KMZ8 207 aa9.28□□□□□ -0.92
USP54-207ENST00000451492 ZC3H12BQ5HYM0 836 aaKnown RBP9.28□□□□□ -0.92
USP54-207ENST00000451492 MBOAT1Q6ZNC8 495 aa9.28□□□□□ -0.92
USP54-207ENST00000451492 CAPN12Q6ZSI9 719 aa9.28□□□□□ -0.92
USP54-207ENST00000451492 RAB43Q86YS6 212 aa9.28□□□□□ -0.92
USP54-207ENST00000451492 CREG2Q8IUH2 290 aa9.28□□□□□ -0.92
USP54-207ENST00000451492 IGDCC3Q8IVU1 814 aa9.28□□□□□ -0.92
USP54-207ENST00000451492 GPATCH11Q8N954 259 aa9.28□□□□□ -0.92
USP54-207ENST00000451492 TEX19Q8NA77 164 aa9.28□□□□□ -0.92
USP54-207ENST00000451492 OR2A1Q8NGT9 310 aa9.28□□□□□ -0.92
USP54-207ENST00000451492 PROKR1Q8TCW9 393 aa9.28□□□□□ -0.92
USP54-207ENST00000451492 ADAMTS17Q8TE56 1095 aa9.28□□□□□ -0.92
USP54-207ENST00000451492 THAP4Q8WY91 577 aa9.28□□□□□ -0.92
USP54-207ENST00000451492 DLG3Q92796 817 aa9.28□□□□□ -0.92
USP54-207ENST00000451492 KCNJ9Q92806 393 aa9.28□□□□□ -0.92
USP54-207ENST00000451492 ALKBH8Q96BT7 664 aaKnown RBP9.28□□□□□ -0.92
USP54-207ENST00000451492 CERS2Q96G23 380 aa9.28□□□□□ -0.92
USP54-207ENST00000451492 KRT12Q99456 494 aa9.28□□□□□ -0.92
USP54-207ENST00000451492 EBNA1BP2Q99848 306 aaKnown RBP9.28□□□□□ -0.92
USP54-207ENST00000451492 DPH2Q9BQC3 489 aaPredicted RBP9.28□□□□□ -0.92
USP54-207ENST00000451492 DPH7Q9BTV6 452 aa9.28□□□□□ -0.92
USP54-207ENST00000451492 SLC25A23Q9BV35 468 aa9.28□□□□□ -0.92
USP54-207ENST00000451492 SOX17Q9H6I2 414 aaPredicted RBP9.28□□□□□ -0.92
USP54-207ENST00000451492 CUTCQ9NTM9 273 aa9.28□□□□□ -0.92
USP54-207ENST00000451492 LUZP4Q9P127 313 aa9.28□□□□□ -0.92
USP54-207ENST00000451492 ZC3H7BQ9UGR2 993 aaKnown RBP9.28□□□□□ -0.92
USP54-207ENST00000451492 MED16Q9Y2X0 877 aa9.28□□□□□ -0.92
USP54-207ENST00000451492 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.28□□□□□ -0.92
USP54-207ENST00000451492 FAM169AQ9Y6X4 670 aa9.28□□□□□ -0.92
USP54-207ENST00000451492 LOC105369274A0A096LPK9 316 aa9.27□□□□□ -0.93
USP54-207ENST00000451492 LOC102723532A0A0G2JNH3 316 aa9.27□□□□□ -0.93
USP54-207ENST00000451492 A0A1B0GX78 115 aa9.27□□□□□ -0.93
USP54-207ENST00000451492 EFCAB8A8MWE9 144 aa9.27□□□□□ -0.93
USP54-207ENST00000451492 MYO1CO00159 1063 aa9.27□□□□□ -0.93
USP54-207ENST00000451492 SMAPO00193 183 aa9.27□□□□□ -0.93
USP54-207ENST00000451492 FFAR3O14843 346 aa9.27□□□□□ -0.93
USP54-207ENST00000451492 DSCR3O14972 297 aa9.27□□□□□ -0.93
USP54-207ENST00000451492 FANCGO15287 622 aa9.27□□□□□ -0.93
USP54-207ENST00000451492 GPR42O15529 346 aa9.27□□□□□ -0.93
USP54-207ENST00000451492 WISP1O95388 367 aa9.27□□□□□ -0.93
USP54-207ENST00000451492 SLC16A8O95907 504 aa9.27□□□□□ -0.93
USP54-207ENST00000451492 MPC1LP0DKB6 136 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms