RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 FAM214AQ32MH5 1076 aa14.65□□□□□ -0.06
CHD3-205ENST00000449744 PCGF5Q86SE9 256 aa14.65□□□□□ -0.06
CHD3-205ENST00000449744 OR2A1Q8NGT9 310 aa14.65□□□□□ -0.06
CHD3-205ENST00000449744 SMPDL3AQ92484 453 aa14.65□□□□□ -0.06
CHD3-205ENST00000449744 KCNJ9Q92806 393 aa14.65□□□□□ -0.06
CHD3-205ENST00000449744 PTERQ96BW5 349 aa14.65□□□□□ -0.06
CHD3-205ENST00000449744 FER1L6-AS2Q96M78 137 aa14.65□□□□□ -0.06
CHD3-205ENST00000449744 KCNF1Q9H3M0 494 aa14.65□□□□□ -0.06
CHD3-205ENST00000449744 CUTCQ9NTM9 273 aa14.65□□□□□ -0.06
CHD3-205ENST00000449744 KLHL42Q9P2K6 505 aa14.65□□□□□ -0.06
CHD3-205ENST00000449744 ZNF451Q9Y4E5 1061 aa14.65□□□□□ -0.06
CHD3-205ENST00000449744 COMMD10Q9Y6G5 202 aa14.65□□□□□ -0.06
CHD3-205ENST00000449744 A0A0J9YVX5 310 aa14.64□□□□□ -0.07
CHD3-205ENST00000449744 A6NL46 340 aa14.64□□□□□ -0.07
CHD3-205ENST00000449744 ARHGEF33A8MVX0 844 aa14.64□□□□□ -0.07
CHD3-205ENST00000449744 DNALI1O14645 258 aaPredicted RBP14.64□□□□□ -0.07
CHD3-205ENST00000449744 DSCR3O14972 297 aa14.64□□□□□ -0.07
CHD3-205ENST00000449744 PSIP1O75475 530 aaKnown RBP14.64□□□□□ -0.07
CHD3-205ENST00000449744 SYF2O95926 243 aaKnown RBP14.64□□□□□ -0.07
CHD3-205ENST00000449744 IGHEP01854 428 aa14.64□□□□□ -0.07
CHD3-205ENST00000449744 F7P08709 466 aaPredicted RBP14.64□□□□□ -0.07
CHD3-205ENST00000449744 ENO3P13929 434 aaPredicted RBP14.64□□□□□ -0.07
CHD3-205ENST00000449744 PGAM1P18669 254 aa14.64□□□□□ -0.07
CHD3-205ENST00000449744 MCM3P25205 808 aa14.64□□□□□ -0.07
CHD3-205ENST00000449744 RPA3P35244 121 aaPredicted RBP14.64□□□□□ -0.07
CHD3-205ENST00000449744 HSD17B2P37059 387 aa14.64□□□□□ -0.07
CHD3-205ENST00000449744 SLC1A2P43004 574 aa14.64□□□□□ -0.07
CHD3-205ENST00000449744 CLCN7P51798 805 aa14.64□□□□□ -0.07
CHD3-205ENST00000449744 VSX2P58304 361 aaPredicted RBP14.64□□□□□ -0.07
CHD3-205ENST00000449744 FOXK1P85037 733 aa14.64□□□□□ -0.07
CHD3-205ENST00000449744 CUL1Q13616 776 aa14.64□□□□□ -0.07
CHD3-205ENST00000449744 FASTKQ14296 549 aaKnown RBP14.64□□□□□ -0.07
CHD3-205ENST00000449744 ARHGAP19Q14CB8 494 aa14.64□□□□□ -0.07
CHD3-205ENST00000449744 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.64□□□□□ -0.07
CHD3-205ENST00000449744 RNASEH2BQ5TBB1 312 aaKnown RBP14.64□□□□□ -0.07
CHD3-205ENST00000449744 MRPL14Q6P1L8 145 aaKnown RBP14.64□□□□□ -0.07
CHD3-205ENST00000449744 NEK10Q6ZWH5 1172 aa14.64□□□□□ -0.07
CHD3-205ENST00000449744 KCNMB4Q86W47 210 aa14.64□□□□□ -0.07
CHD3-205ENST00000449744 FDCSPQ8NFU4 85 aa14.64□□□□□ -0.07
CHD3-205ENST00000449744 OR2Y1Q8NGV0 311 aa14.64□□□□□ -0.07
CHD3-205ENST00000449744 INPP5DQ92835 1189 aa14.64□□□□□ -0.07
CHD3-205ENST00000449744 ACAT2Q9BWD1 397 aa14.64□□□□□ -0.07
CHD3-205ENST00000449744 DDX47Q9H0S4 455 aaKnown RBP14.64□□□□□ -0.07
CHD3-205ENST00000449744 MLXIPLQ9NP71 852 aa14.64□□□□□ -0.07
CHD3-205ENST00000449744 IARS2Q9NSE4 1012 aaKnown RBP14.64□□□□□ -0.07
CHD3-205ENST00000449744 FBXO5Q9UKT4 447 aa14.64□□□□□ -0.07
CHD3-205ENST00000449744 PCDHGB7Q9Y5F8 929 aa14.64□□□□□ -0.07
CHD3-205ENST00000449744 SEC16AO15027 2179 aa14.64□□□□□ -0.07
CHD3-205ENST00000449744 A0A1W2PPV9 198 aa14.63□□□□□ -0.07
CHD3-205ENST00000449744 MYO1CO00159 1063 aa14.63□□□□□ -0.07
CHD3-205ENST00000449744 CTSVO60911 334 aa14.63□□□□□ -0.07
CHD3-205ENST00000449744 VPS26AO75436 327 aa14.63□□□□□ -0.07
CHD3-205ENST00000449744 CEACAM4O75871 244 aa14.63□□□□□ -0.07
CHD3-205ENST00000449744 CCNDBP1O95273 360 aa14.63□□□□□ -0.07
CHD3-205ENST00000449744 EIF2S1P05198 315 aaKnown RBP14.63□□□□□ -0.07
CHD3-205ENST00000449744 MPC1LP0DKB6 136 aa14.63□□□□□ -0.07
CHD3-205ENST00000449744 ERVK-10P10266 1014 aa14.63□□□□□ -0.07
CHD3-205ENST00000449744 PNLIPRP1P54315 467 aa14.63□□□□□ -0.07
CHD3-205ENST00000449744 MPP1Q00013 466 aa14.63□□□□□ -0.07
CHD3-205ENST00000449744 PTK6Q13882 451 aa14.63□□□□□ -0.07
CHD3-205ENST00000449744 IGFBP7Q16270 282 aa14.63□□□□□ -0.07
CHD3-205ENST00000449744 HSP90AA5PQ58FG0 334 aa14.63□□□□□ -0.07
CHD3-205ENST00000449744 WASHC2DQ5SRD0 308 aa14.63□□□□□ -0.07
CHD3-205ENST00000449744 UGT3A1Q6NUS8 523 aa14.63□□□□□ -0.07
CHD3-205ENST00000449744 ZNF549Q6P9A3 640 aa14.63□□□□□ -0.07
CHD3-205ENST00000449744 SUSD1Q6UWL2 747 aa14.63□□□□□ -0.07
CHD3-205ENST00000449744 OVCH1Q7RTY7 1134 aa14.63□□□□□ -0.07
CHD3-205ENST00000449744 MRGPREQ86SM8 312 aa14.63□□□□□ -0.07
CHD3-205ENST00000449744 AGGF1Q8N302 714 aaeCLIP14.63□□□□□ -0.07
CHD3-205ENST00000449744 CLEC1AQ8NC01 280 aa14.63□□□□□ -0.07
CHD3-205ENST00000449744 GIMAP7Q8NHV1 300 aa14.63□□□□□ -0.07
CHD3-205ENST00000449744 FKBP10Q96AY3 582 aa14.63□□□□□ -0.07
CHD3-205ENST00000449744 PKP4Q99569 1192 aa14.63□□□□□ -0.07
CHD3-205ENST00000449744 GPR21Q99679 349 aa14.63□□□□□ -0.07
CHD3-205ENST00000449744 SLC30A3Q99726 388 aa14.63□□□□□ -0.07
CHD3-205ENST00000449744 DPH7Q9BTV6 452 aa14.63□□□□□ -0.07
CHD3-205ENST00000449744 MRPS30Q9NP92 439 aaKnown RBP14.63□□□□□ -0.07
CHD3-205ENST00000449744 UTP6Q9NYH9 597 aaKnown RBP14.63□□□□□ -0.07
CHD3-205ENST00000449744 GPR83Q9NYM4 423 aa14.63□□□□□ -0.07
CHD3-205ENST00000449744 DHRS7Q9Y394 339 aa14.63□□□□□ -0.07
CHD3-205ENST00000449744 KLK4Q9Y5K2 254 aa14.63□□□□□ -0.07
CHD3-205ENST00000449744 HYKKA2RU49 373 aa14.62□□□□□ -0.07
CHD3-205ENST00000449744 TTLL8A6PVC2 850 aa14.62□□□□□ -0.07
CHD3-205ENST00000449744 ZBTB14O43829 449 aa14.62□□□□□ -0.07
CHD3-205ENST00000449744 DPM1O60762 260 aa14.62□□□□□ -0.07
CHD3-205ENST00000449744 HAUS5O94927 633 aa14.62□□□□□ -0.07
CHD3-205ENST00000449744 TTC4O95801 387 aa14.62□□□□□ -0.07
CHD3-205ENST00000449744 ALBP02768 609 aa14.62□□□□□ -0.07
CHD3-205ENST00000449744 ERGP11308 486 aa14.62□□□□□ -0.07
CHD3-205ENST00000449744 GCGRP47871 477 aa14.62□□□□□ -0.07
CHD3-205ENST00000449744 MLLT10P55197 1068 aa14.62□□□□□ -0.07
CHD3-205ENST00000449744 GNG11P61952 73 aa14.62□□□□□ -0.07
CHD3-205ENST00000449744 DHX9Q08211 1270 aaKnown RBP14.62□□□□□ -0.07
CHD3-205ENST00000449744 CRYMQ14894 314 aa14.62□□□□□ -0.07
CHD3-205ENST00000449744 SPANXN3Q5MJ09 141 aa14.62□□□□□ -0.07
CHD3-205ENST00000449744 PAPD7Q5XG87 772 aaKnown RBP14.62□□□□□ -0.07
CHD3-205ENST00000449744 FRMPD2BQ6IN97 320 aa14.62□□□□□ -0.07
CHD3-205ENST00000449744 ATCAYQ86WG3 371 aa14.62□□□□□ -0.07
CHD3-205ENST00000449744 HPS6Q86YV9 775 aa14.62□□□□□ -0.07
CHD3-205ENST00000449744 CPNE9Q8IYJ1 553 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms