RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 FUBP1Q96AE4 644 aaKnown RBP8.21□□□□□ -1.1
HCG18-238ENST00000449544 MCUR1Q96AQ8 359 aa8.21□□□□□ -1.1
HCG18-238ENST00000449544 KLHL29Q96CT2 875 aa8.21□□□□□ -1.1
HCG18-238ENST00000449544 LRGUKQ96M69 825 aa8.21□□□□□ -1.1
HCG18-238ENST00000449544 PKMYT1Q99640 499 aa8.21□□□□□ -1.1
HCG18-238ENST00000449544 LRRC61Q9BV99 259 aa8.21□□□□□ -1.1
HCG18-238ENST00000449544 ZNF304Q9HCX3 659 aa8.21□□□□□ -1.1
HCG18-238ENST00000449544 ZNF282Q9UDV7 671 aaPredicted RBP8.21□□□□□ -1.1
HCG18-238ENST00000449544 CORO1CQ9ULV4 474 aaPredicted RBP8.21□□□□□ -1.1
HCG18-238ENST00000449544 TMCO1Q9UM00 188 aa8.21□□□□□ -1.1
HCG18-238ENST00000449544 A8MVJ9 347 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 CDC7O00311 574 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 CPA3P15088 417 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 ZNF24P17028 368 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 IL1RNP18510 177 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 NAB1Q13506 487 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 RCAN2Q14206 197 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 GPR18Q14330 331 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 PDCD2Q16342 344 aaPredicted RBP8.2□□□□□ -1.1
HCG18-238ENST00000449544 RPE65Q16518 533 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 ATP6AP1LQ52LC2 224 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 TOR1AIP1Q5JTV8 583 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 N4BP2L1Q5TBK1 243 aaPredicted RBP8.2□□□□□ -1.1
HCG18-238ENST00000449544 ADAMTSL4Q6UY14 1074 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 OR5L2Q8NGL0 311 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 RDH11Q8TC12 318 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 TRPC4APQ8TEL6 797 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 ADAP2Q9NPF8 381 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 EQTNQ9NQ60 294 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 NLE1Q9NVX2 485 aaPredicted RBP8.2□□□□□ -1.1
HCG18-238ENST00000449544 HPF1Q9NWY4 346 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 UCKL1Q9NWZ5 548 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 NXT1Q9UKK6 140 aaKnown RBP8.2□□□□□ -1.1
HCG18-238ENST00000449544 FARSAQ9Y285 508 aaKnown RBP8.2□□□□□ -1.1
HCG18-238ENST00000449544 TRGV8A0A0C4DH27 118 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 BRINP1O60477 761 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 SLC25A12O75746 678 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 STK17BO94768 372 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 ITIH1P19827 911 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 BNC1Q01954 994 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 VPS26BQ4G0F5 336 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 KLHL24Q6TFL4 600 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 ZBTB44Q8NCP5 570 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 PPFIBP2Q8ND30 876 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 MRPL46Q9H2W6 279 aaKnown RBP8.2□□□□□ -1.1
HCG18-238ENST00000449544 TMEM74BQ9NUR3 256 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 IL17CQ9P0M4 197 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 PLAAQ9Y263 795 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 VNN2O95498 520 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 EPORP19235 508 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 ACRV1P26436 265 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 SLC7A1P30825 629 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 PNLIPRP1P54315 467 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 SKOR1P84550 965 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 TRA2AQ13595 282 aaKnown RBP eCLIP8.2□□□□□ -1.1
HCG18-238ENST00000449544 DNASE1L3Q13609 305 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 PDK4Q16654 411 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 POMZP3Q6PJE2 187 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 TMIGD1Q6UXZ0 262 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 PTRH1Q86Y79 214 aaKnown RBP8.2□□□□□ -1.1
HCG18-238ENST00000449544 OR52E1Q8NGJ3 308 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 OR5AR1Q8NGP9 310 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 ASB15Q8WXK1 588 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 FUCA2Q9BTY2 467 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 TEX12Q9BXU0 123 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 C1GALT1Q9NS00 363 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 NBL1P41271 181 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 GPR3P46089 330 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 CTSCP53634 463 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 TMEM198Q66K66 360 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 SULT1C3Q6IMI6 304 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 FNDC5Q8NAU1 212 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 C9orf43Q8TAL5 461 aaPredicted RBP8.2□□□□□ -1.1
HCG18-238ENST00000449544 KCTD4Q8WVF5 259 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 SLC9A6Q92581 669 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 EZH1Q92800 747 aaPredicted RBP8.2□□□□□ -1.1
HCG18-238ENST00000449544 EXOSC8Q96B26 276 aaKnown RBP8.2□□□□□ -1.1
HCG18-238ENST00000449544 ZHX1-C8orf76Q96EF9 292 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 CATSPER2Q96P56 530 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 TBL1XR1Q9BZK7 514 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 RMND5AQ9H871 391 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 CDYLQ9Y232 598 aa8.2□□□□□ -1.1
HCG18-238ENST00000449544 ZSWIM8A7E2V4 1837 aa8.19□□□□□ -1.1
HCG18-238ENST00000449544 A0A0G2JND7 137 aa8.19□□□□□ -1.1
HCG18-238ENST00000449544 BTNL10A8MVZ5 291 aa8.19□□□□□ -1.1
HCG18-238ENST00000449544 NUDT21O43809 227 aaKnown RBP8.19□□□□□ -1.1
HCG18-238ENST00000449544 CIB2O75838 187 aa8.19□□□□□ -1.1
HCG18-238ENST00000449544 IGLV3-27P01718 113 aa8.19□□□□□ -1.1
HCG18-238ENST00000449544 TPOP07202 933 aa8.19□□□□□ -1.1
HCG18-238ENST00000449544 CDH1P12830 882 aa8.19□□□□□ -1.1
HCG18-238ENST00000449544 SLC5A2P31639 672 aa8.19□□□□□ -1.1
HCG18-238ENST00000449544 SOX11P35716 441 aa8.19□□□□□ -1.1
HCG18-238ENST00000449544 CCZ1BP86790 482 aa8.19□□□□□ -1.1
HCG18-238ENST00000449544 CCZ1P86791 482 aaPredicted RBP8.19□□□□□ -1.1
HCG18-238ENST00000449544 MAD2L1Q13257 205 aaPredicted RBP8.19□□□□□ -1.1
HCG18-238ENST00000449544 OLIG2Q13516 323 aa8.19□□□□□ -1.1
HCG18-238ENST00000449544 SEMA5AQ13591 1074 aa8.19□□□□□ -1.1
HCG18-238ENST00000449544 TSNQ15631 228 aaKnown RBP8.19□□□□□ -1.1
HCG18-238ENST00000449544 FBXO48Q5FWF7 155 aa8.19□□□□□ -1.1
HCG18-238ENST00000449544 PAQR3Q6TCH7 311 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms