RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 STK16O75716 305 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 HTR1BP28222 390 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 GABRB3P28472 473 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 NSG1P42857 185 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 PRIM2P49643 509 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 ILF2Q12905 390 aaKnown RBP11.01□□□□□ -0.65
PTCH2-203ENST00000447098 SPCS2Q15005 226 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 TPRG1Q6ZUI0 275 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 SNX20Q7Z614 316 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 DEFB119Q8N690 84 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 MCFD2Q8NI22 146 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 SPPL3Q8TCT6 385 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 KCNN1Q92952 543 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 SLC35B4Q969S0 331 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 KCNA7Q96RP8 456 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 CCDC3Q9BQI4 270 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 KLF16Q9BXK1 252 aaPredicted RBP11.01□□□□□ -0.65
PTCH2-203ENST00000447098 TDRD1Q9BXT4 1180 aaKnown RBP11.01□□□□□ -0.65
PTCH2-203ENST00000447098 REXO4Q9GZR2 422 aaKnown RBP11.01□□□□□ -0.65
PTCH2-203ENST00000447098 PHPT1Q9NRX4 125 aaPredicted RBP11.01□□□□□ -0.65
PTCH2-203ENST00000447098 FBXL12Q9NXK8 326 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 RASGRP1O95267 797 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 EFNA1P20827 205 aaPredicted RBP11.01□□□□□ -0.65
PTCH2-203ENST00000447098 CD72P21854 359 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 NKX2-5P52952 324 aaPredicted RBP11.01□□□□□ -0.65
PTCH2-203ENST00000447098 CLCQ05315 142 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 TRAF3Q13114 568 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 OTUD1Q5VV17 481 aaPredicted RBP11.01□□□□□ -0.65
PTCH2-203ENST00000447098 ZNF621Q6ZSS3 439 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 P2RY8Q86VZ1 359 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 SLC39A13Q96H72 371 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 SFXN1Q9H9B4 322 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 TMEM98Q9Y2Y6 226 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 GVINP1Q7Z2Y8 2422 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 TRIP11Q15643 1979 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 IDH3BO43837 385 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 ZNF682O95780 498 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 OGNP20774 298 aaKnown RBP11.01□□□□□ -0.65
PTCH2-203ENST00000447098 DDX6P26196 483 aaKnown RBP eCLIP11.01□□□□□ -0.65
PTCH2-203ENST00000447098 PBX2P40425 430 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 ATP4BP51164 291 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 POLR2JP52435 117 aaKnown RBP11.01□□□□□ -0.65
PTCH2-203ENST00000447098 STC1P52823 247 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 DIO3P55073 304 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 ZNF33AQ06730 810 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 RANBP10Q6VN20 620 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 ARMCX6Q7L4S7 300 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 SIPA1Q96FS4 1042 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 APOLD1Q96LR9 279 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 NANOGQ9H9S0 305 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 SMURF2Q9HAU4 748 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 KCNE2Q9Y6J6 123 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 TBX1O43435 398 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 PGLSO95336 258 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 MLYCDO95822 493 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 OTCP00480 354 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 CAPN1P07384 714 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 ACP5P13686 325 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 PREPP48147 710 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 SOX9P48436 509 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 VBP1P61758 197 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 DAB2P98082 770 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 GRSF1Q12849 480 aaKnown RBP eCLIP11.01□□□□□ -0.65
PTCH2-203ENST00000447098 TMEM236Q5W0B7 351 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 CHRDL2Q6WN34 429 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 CADM3Q8N126 398 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 ZNF614Q8N883 585 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 ZFP90Q8TF47 636 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 C3orf30Q96M34 536 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 EPS8L2Q9H6S3 715 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 GALPQ9UBC7 116 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 ERVW-1Q9UQF0 538 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 ERVK-11Q9UQG0 969 aa11.01□□□□□ -0.65
PTCH2-203ENST00000447098 GSAPA4D1B5 854 aa11□□□□□ -0.65
PTCH2-203ENST00000447098 ANKDD1BA6NHY2 528 aa11□□□□□ -0.65
PTCH2-203ENST00000447098 UPK3BL1B0FP48 263 aa11□□□□□ -0.65
PTCH2-203ENST00000447098 UPK3BL2E5RIL1 263 aa11□□□□□ -0.65
PTCH2-203ENST00000447098 MUSKO15146 869 aa11□□□□□ -0.65
PTCH2-203ENST00000447098 RGS14O43566 566 aa11□□□□□ -0.65
PTCH2-203ENST00000447098 FAM20BO75063 409 aa11□□□□□ -0.65
PTCH2-203ENST00000447098 HNRNPA1P09651 372 aaKnown RBP eCLIP11□□□□□ -0.65
PTCH2-203ENST00000447098 CYP4B1P13584 511 aa11□□□□□ -0.65
PTCH2-203ENST00000447098 HOXB2P14652 356 aa11□□□□□ -0.65
PTCH2-203ENST00000447098 HMGA1P17096 107 aaKnown RBP11□□□□□ -0.65
PTCH2-203ENST00000447098 GPX3P22352 226 aa11□□□□□ -0.65
PTCH2-203ENST00000447098 IDUAP35475 653 aa11□□□□□ -0.65
PTCH2-203ENST00000447098 GGT5P36269 586 aa11□□□□□ -0.65
PTCH2-203ENST00000447098 MTPNP58546 118 aa11□□□□□ -0.65
PTCH2-203ENST00000447098 COPZ1P61923 177 aa11□□□□□ -0.65
PTCH2-203ENST00000447098 ARMC8Q8IUR7 673 aa11□□□□□ -0.65
PTCH2-203ENST00000447098 HID1Q8IV36 788 aa11□□□□□ -0.65
PTCH2-203ENST00000447098 SCML4Q8N228 414 aa11□□□□□ -0.65
PTCH2-203ENST00000447098 DUS3LQ96G46 650 aaKnown RBP11□□□□□ -0.65
PTCH2-203ENST00000447098 USE1Q9NZ43 259 aa11□□□□□ -0.65
PTCH2-203ENST00000447098 KLHL3Q9UH77 587 aa11□□□□□ -0.65
PTCH2-203ENST00000447098 POLR3HQ9Y535 204 aaPredicted RBP11□□□□□ -0.65
PTCH2-203ENST00000447098 I6L893 689 aaPredicted RBP11□□□□□ -0.65
PTCH2-203ENST00000447098 ANGPTL1O95841 491 aa11□□□□□ -0.65
PTCH2-203ENST00000447098 FADS2O95864 444 aaKnown RBP11□□□□□ -0.65
PTCH2-203ENST00000447098 ALDOCP09972 364 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms