RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 ELF1P32519 619 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 KRT9P35527 623 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 TNNT2P45379 298 aaPredicted RBP2.58□□□□□ -2
HMGB1P18-201ENST00000438801 TUBB2AQ13885 445 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 FGFBP1Q14512 234 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 KIAA1644Q3SXP7 199 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 KRTCAP3Q53RY4 240 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 NAA35Q5VZE5 725 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 PLXDC2Q6UX71 529 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 CLEC4GQ6UXB4 293 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 ARID3BQ8IVW6 561 aaPredicted RBP2.58□□□□□ -2
HMGB1P18-201ENST00000438801 ANKRD52Q8NB46 1076 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 FAM222BQ8WU58 562 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 KLHL29Q96CT2 875 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 ZBTB10Q96DT7 871 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 PPP1R13BQ96KQ4 1090 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 MYADMQ96S97 322 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 VGLL1Q99990 258 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 PSD2Q9BQI7 771 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 TUBB2BQ9BVA1 445 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 GPR63Q9BZJ6 419 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 S1PR5Q9H228 398 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 RAD21L1Q9H4I0 556 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 TRPC7Q9HCX4 862 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 LTB4R2Q9NPC1 389 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 SLC6A13Q9NSD5 602 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 PPP1R14DQ9NXH3 145 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 BARHL2Q9NY43 387 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 MTF2Q9Y483 593 aaPredicted RBP2.58□□□□□ -2
HMGB1P18-201ENST00000438801 AKAP6Q13023 2319 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 PTPRFP10586 1907 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 STAB2Q8WWQ8 2551 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 ABCA4P78363 2273 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 SIPA1L1O43166 1804 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 A0A0G2JNG1 304 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 FAM149AA5PLN7 773 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 LRRC53A6NM62 1247 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 ANKRD66B4E2M5 251 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 M0QZ24 198 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 SNAP23O00161 211 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 SEC31AO94979 1220 aaKnown RBP2.57□□□□□ -2
HMGB1P18-201ENST00000438801 PLA2G4BP0C869 781 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 IGHV4-38-2P0DP08 117 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 GNAZP19086 355 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 UGT1A1P22309 533 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 UBA1P22314 1058 aaKnown RBP2.57□□□□□ -2
HMGB1P18-201ENST00000438801 RFC2P35250 354 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 UQCRFS1P47985 274 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 RPP30P78346 268 aaKnown RBP2.57□□□□□ -2
HMGB1P18-201ENST00000438801 CREB5Q02930 508 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 SRSF6Q13247 344 aaKnown RBP2.57□□□□□ -2
HMGB1P18-201ENST00000438801 KIR2DS5Q14953 304 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 NONOQ15233 471 aaKnown RBP eCLIP2.57□□□□□ -2
HMGB1P18-201ENST00000438801 ZNF239Q16600 458 aaKnown RBP2.57□□□□□ -2
HMGB1P18-201ENST00000438801 ALG11Q2TAA5 492 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 WDR78Q5VTH9 848 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 PAPD4Q6PIY7 484 aaKnown RBP2.57□□□□□ -2
HMGB1P18-201ENST00000438801 METTL7BQ6UX53 244 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 MFSD6Q6ZSS7 791 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 SH2D5Q6ZV89 423 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 BIVMQ86UB2 503 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 LONP2Q86WA8 852 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 TGIF2LYQ8IUE0 185 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 RDM1Q8NG50 284 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 IGSF8Q969P0 613 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 KIF1BPQ96EK5 621 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 OXNAD1Q96HP4 312 aaPredicted RBP2.57□□□□□ -2
HMGB1P18-201ENST00000438801 HARBI1Q96MB7 349 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 FAM20AQ96MK3 541 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 RBM4BQ9BQ04 359 aaKnown RBP2.57□□□□□ -2
HMGB1P18-201ENST00000438801 ISCA1Q9BUE6 129 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 MCRIP2Q9BUT9 160 aaKnown RBP2.57□□□□□ -2
HMGB1P18-201ENST00000438801 TMEM39BQ9GZU3 492 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 TRPV6Q9H1D0 765 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 TLE6Q9H808 572 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 RPS10P5Q9NQ39 176 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 ASAH2Q9NR71 780 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 KCNJ14Q9UNX9 436 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 AGTPBP1Q9UPW5 1226 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 COL7A1Q02388 2944 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 KNTC1P50748 2209 aa2.57□□□□□ -2
HMGB1P18-201ENST00000438801 TANC1Q9C0D5 1861 aa2.56□□□□□ -2
HMGB1P18-201ENST00000438801 MICAL3Q7RTP6 2002 aa2.56□□□□□ -2
HMGB1P18-201ENST00000438801 ESPL1Q14674 2120 aa2.56□□□□□ -2
HMGB1P18-201ENST00000438801 MEIOCA2RUB1 952 aa2.56□□□□□ -2
HMGB1P18-201ENST00000438801 TMEM178BH3BS89 294 aa2.56□□□□□ -2
HMGB1P18-201ENST00000438801 PLK4O00444 970 aa2.56□□□□□ -2
HMGB1P18-201ENST00000438801 TSPAN4O14817 238 aa2.56□□□□□ -2
HMGB1P18-201ENST00000438801 BUD23O43709 281 aaKnown RBP2.56□□□□□ -2
HMGB1P18-201ENST00000438801 MMP1P03956 469 aa2.56□□□□□ -2
HMGB1P18-201ENST00000438801 HSP90AB1P08238 724 aaKnown RBP2.56□□□□□ -2
HMGB1P18-201ENST00000438801 SFTPCP11686 197 aa2.56□□□□□ -2
HMGB1P18-201ENST00000438801 GGT5P36269 586 aa2.56□□□□□ -2
HMGB1P18-201ENST00000438801 STARD6P59095 220 aa2.56□□□□□ -2
HMGB1P18-201ENST00000438801 HNRNPDQ14103 355 aaKnown RBP2.56□□□□□ -2
HMGB1P18-201ENST00000438801 GSTA3Q16772 222 aa2.56□□□□□ -2
HMGB1P18-201ENST00000438801 FFAR4Q5NUL3 377 aa2.56□□□□□ -2
HMGB1P18-201ENST00000438801 LCE3EQ5T5B0 92 aa2.56□□□□□ -2
HMGB1P18-201ENST00000438801 PACS1Q6VY07 963 aa2.56□□□□□ -2
HMGB1P18-201ENST00000438801 ATG9AQ7Z3C6 839 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms