RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 PNLIPRP1P54315 467 aa23.77■■□□□ 1.4
RAPGEF1-206ENST00000438647 FASTKQ14296 549 aaKnown RBP23.77■■□□□ 1.4
RAPGEF1-206ENST00000438647 RBM20Q5T481 1227 aaKnown RBP23.77■■□□□ 1.4
RAPGEF1-206ENST00000438647 FAM45BPQ6NSW5 357 aa23.77■■□□□ 1.4
RAPGEF1-206ENST00000438647 RHBDD2Q6NTF9 364 aa23.77■■□□□ 1.4
RAPGEF1-206ENST00000438647 UBE2R2Q712K3 238 aaPredicted RBP23.77■■□□□ 1.4
RAPGEF1-206ENST00000438647 PIWIL4Q7Z3Z4 852 aaKnown RBP23.77■■□□□ 1.4
RAPGEF1-206ENST00000438647 MCATQ8IVS2 390 aaKnown RBP23.77■■□□□ 1.4
RAPGEF1-206ENST00000438647 MYO1HQ8N1T3 1032 aa23.77■■□□□ 1.4
RAPGEF1-206ENST00000438647 GPATCH11Q8N954 259 aa23.77■■□□□ 1.4
RAPGEF1-206ENST00000438647 OR2A1Q8NGT9 310 aa23.77■■□□□ 1.4
RAPGEF1-206ENST00000438647 FAM45AQ8TCE6 357 aa23.77■■□□□ 1.4
RAPGEF1-206ENST00000438647 PKP4Q99569 1192 aa23.77■■□□□ 1.4
RAPGEF1-206ENST00000438647 MIPEPQ99797 713 aa23.77■■□□□ 1.4
RAPGEF1-206ENST00000438647 C17orf62Q9BQA9 187 aa23.77■■□□□ 1.4
RAPGEF1-206ENST00000438647 NSMCE4AQ9NXX6 385 aa23.77■■□□□ 1.4
RAPGEF1-206ENST00000438647 SLC17A6Q9P2U8 582 aa23.77■■□□□ 1.4
RAPGEF1-206ENST00000438647 FARSAQ9Y285 508 aaKnown RBP23.77■■□□□ 1.4
RAPGEF1-206ENST00000438647 A0A1W2PPV9 198 aa23.76■■□□□ 1.39
RAPGEF1-206ENST00000438647 H3BMH7 237 aa23.76■■□□□ 1.39
RAPGEF1-206ENST00000438647 HCRTR1O43613 425 aa23.76■■□□□ 1.39
RAPGEF1-206ENST00000438647 SLC16A8O95907 504 aa23.76■■□□□ 1.39
RAPGEF1-206ENST00000438647 SYF2O95926 243 aaKnown RBP23.76■■□□□ 1.39
RAPGEF1-206ENST00000438647 PRB1P04280 392 aa23.76■■□□□ 1.39
RAPGEF1-206ENST00000438647 C8GP07360 202 aa23.76■■□□□ 1.39
RAPGEF1-206ENST00000438647 RPA3P35244 121 aaPredicted RBP23.76■■□□□ 1.39
RAPGEF1-206ENST00000438647 GRIA3P42263 894 aa23.76■■□□□ 1.39
RAPGEF1-206ENST00000438647 CDKN2DP55273 166 aa23.76■■□□□ 1.39
RAPGEF1-206ENST00000438647 C19orf57Q0VDD7 668 aa23.76■■□□□ 1.39
RAPGEF1-206ENST00000438647 ILF2Q12905 390 aaKnown RBP23.76■■□□□ 1.39
RAPGEF1-206ENST00000438647 SP140Q13342 867 aa23.76■■□□□ 1.39
RAPGEF1-206ENST00000438647 PDAP1Q13442 181 aaKnown RBP23.76■■□□□ 1.39
RAPGEF1-206ENST00000438647 ERV3-1Q14264 604 aa23.76■■□□□ 1.39
RAPGEF1-206ENST00000438647 FCRL6Q6DN72 434 aa23.76■■□□□ 1.39
RAPGEF1-206ENST00000438647 SYVN1Q86TM6 617 aa23.76■■□□□ 1.39
RAPGEF1-206ENST00000438647 SLC26A11Q86WA9 606 aa23.76■■□□□ 1.39
RAPGEF1-206ENST00000438647 PROKR1Q8TCW9 393 aa23.76■■□□□ 1.39
RAPGEF1-206ENST00000438647 NDC1Q9BTX1 674 aa23.76■■□□□ 1.39
RAPGEF1-206ENST00000438647 NLNQ9BYT8 704 aa23.76■■□□□ 1.39
RAPGEF1-206ENST00000438647 SPRTNQ9H040 489 aaPredicted RBP23.76■■□□□ 1.39
RAPGEF1-206ENST00000438647 TXLNGQ9NUQ3 528 aa23.76■■□□□ 1.39
RAPGEF1-206ENST00000438647 MOCS1Q9NZB8 636 aa23.76■■□□□ 1.39
RAPGEF1-206ENST00000438647 GRHL1Q9NZI5 618 aa23.76■■□□□ 1.39
RAPGEF1-206ENST00000438647 POLHQ9Y253 713 aa23.76■■□□□ 1.39
RAPGEF1-206ENST00000438647 ATRXP46100 2492 aa23.75■■□□□ 1.39
RAPGEF1-206ENST00000438647 SEC16AO15027 2179 aa23.75■■□□□ 1.39
RAPGEF1-206ENST00000438647 C9J4A7 227 aa23.75■■□□□ 1.39
RAPGEF1-206ENST00000438647 URI1O94763 535 aaPredicted RBP23.75■■□□□ 1.39
RAPGEF1-206ENST00000438647 CCNDBP1O95273 360 aa23.75■■□□□ 1.39
RAPGEF1-206ENST00000438647 TIAL1Q01085 375 aaKnown RBP eCLIP23.75■■□□□ 1.39
RAPGEF1-206ENST00000438647 TSTA3Q13630 321 aaPredicted RBP23.75■■□□□ 1.39
RAPGEF1-206ENST00000438647 DEFB109BQ30KR1 87 aa23.75■■□□□ 1.39
RAPGEF1-206ENST00000438647 TCTE1Q5JU00 501 aa23.75■■□□□ 1.39
RAPGEF1-206ENST00000438647 HECTD2Q5U5R9 776 aa23.75■■□□□ 1.39
RAPGEF1-206ENST00000438647 PAQR3Q6TCH7 311 aa23.75■■□□□ 1.39
RAPGEF1-206ENST00000438647 ZNF655Q8N720 491 aaPredicted RBP23.75■■□□□ 1.39
RAPGEF1-206ENST00000438647 MCOLN3Q8TDD5 553 aa23.75■■□□□ 1.39
RAPGEF1-206ENST00000438647 ZNF480Q8WV37 535 aa23.75■■□□□ 1.39
RAPGEF1-206ENST00000438647 EEF1AKMT1Q8WVE0 214 aa23.75■■□□□ 1.39
RAPGEF1-206ENST00000438647 APOBEC4Q8WW27 367 aaKnown RBP23.75■■□□□ 1.39
RAPGEF1-206ENST00000438647 DLG3Q92796 817 aa23.75■■□□□ 1.39
RAPGEF1-206ENST00000438647 ACAT2Q9BWD1 397 aa23.75■■□□□ 1.39
RAPGEF1-206ENST00000438647 PHACTR1Q9C0D0 580 aa23.75■■□□□ 1.39
RAPGEF1-206ENST00000438647 ADNPQ9H2P0 1102 aa23.75■■□□□ 1.39
RAPGEF1-206ENST00000438647 SAYSD1Q9NPB0 183 aa23.75■■□□□ 1.39
RAPGEF1-206ENST00000438647 UTP6Q9NYH9 597 aaKnown RBP23.75■■□□□ 1.39
RAPGEF1-206ENST00000438647 ANKMY1Q9P2S6 941 aa23.75■■□□□ 1.39
RAPGEF1-206ENST00000438647 VWA7Q9Y334 891 aa23.75■■□□□ 1.39
RAPGEF1-206ENST00000438647 PIEZO2Q9H5I5 2752 aa23.75■■□□□ 1.39
RAPGEF1-206ENST00000438647 TUBB4AP04350 444 aa23.74■■□□□ 1.39
RAPGEF1-206ENST00000438647 FAM87AP0C7U9 286 aa23.74■■□□□ 1.39
RAPGEF1-206ENST00000438647 ARSFP54793 590 aa23.74■■□□□ 1.39
RAPGEF1-206ENST00000438647 IL2P60568 153 aa23.74■■□□□ 1.39
RAPGEF1-206ENST00000438647 WHAMMP3Q1A5X7 153 aa23.74■■□□□ 1.39
RAPGEF1-206ENST00000438647 PTCHD3Q3KNS1 767 aa23.74■■□□□ 1.39
RAPGEF1-206ENST00000438647 SUSD1Q6UWL2 747 aa23.74■■□□□ 1.39
RAPGEF1-206ENST00000438647 EXD3Q8N9H8 876 aa23.74■■□□□ 1.39
RAPGEF1-206ENST00000438647 SELENOSQ9BQE4 189 aa23.74■■□□□ 1.39
RAPGEF1-206ENST00000438647 MRPS30Q9NP92 439 aaKnown RBP23.74■■□□□ 1.39
RAPGEF1-206ENST00000438647 SNX7Q9UNH6 387 aa23.74■■□□□ 1.39
RAPGEF1-206ENST00000438647 CDC14CA4D256 554 aa23.73■■□□□ 1.39
RAPGEF1-206ENST00000438647 PABPN1LA6NDY0 278 aaKnown RBP23.73■■□□□ 1.39
RAPGEF1-206ENST00000438647 E7ENX8 843 aa23.73■■□□□ 1.39
RAPGEF1-206ENST00000438647 SLC16A5O15375 505 aa23.73■■□□□ 1.39
RAPGEF1-206ENST00000438647 SRPX2O60687 465 aaPredicted RBP23.73■■□□□ 1.39
RAPGEF1-206ENST00000438647 C1QL1O75973 258 aa23.73■■□□□ 1.39
RAPGEF1-206ENST00000438647 FDXRP22570 491 aa23.73■■□□□ 1.39
RAPGEF1-206ENST00000438647 PLTPP55058 493 aa23.73■■□□□ 1.39
RAPGEF1-206ENST00000438647 POLE2P56282 527 aa23.73■■□□□ 1.39
RAPGEF1-206ENST00000438647 TAP2Q03519 686 aa23.73■■□□□ 1.39
RAPGEF1-206ENST00000438647 ATP1A1-AS1Q5TC04 95 aa23.73■■□□□ 1.39
RAPGEF1-206ENST00000438647 YOD1Q5VVQ6 348 aaPredicted RBP23.73■■□□□ 1.39
RAPGEF1-206ENST00000438647 ZNF385CQ66K41 422 aaPredicted RBP23.73■■□□□ 1.39
RAPGEF1-206ENST00000438647 C8orf74Q6P047 294 aa23.73■■□□□ 1.39
RAPGEF1-206ENST00000438647 FAM198BQ6UWH4 519 aa23.73■■□□□ 1.39
RAPGEF1-206ENST00000438647 STRA8Q7Z7C7 330 aa23.73■■□□□ 1.39
RAPGEF1-206ENST00000438647 ENDOVQ8N8Q3 282 aaKnown RBP23.73■■□□□ 1.39
RAPGEF1-206ENST00000438647 CDKL2Q92772 493 aa23.73■■□□□ 1.39
RAPGEF1-206ENST00000438647 LINGO1Q96FE5 620 aa23.73■■□□□ 1.39
RAPGEF1-206ENST00000438647 CCDC138Q96M89 665 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms