RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 PRRT3Q5FWE3 981 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 FBXO48Q5FWF7 155 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 CDKL4Q5MAI5 379 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 ZNF678Q5SXM1 525 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 SULT1C3Q6IMI6 304 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 DUS1LQ6P1R4 473 aaKnown RBP6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 SLC30A9Q6PML9 568 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 FRA10AC1Q70Z53 315 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 RPS27LQ71UM5 84 aaKnown RBP6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 SYT12Q8IV01 421 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 SLC22A9Q8IVM8 553 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 SFTPA2Q8IWL1 248 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 LRRC34Q8IZ02 419 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 LSMEM2Q8N112 164 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 CCNYL1Q8N7R7 359 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 OR5AR1Q8NGP9 310 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 RAB3IL1Q8TBN0 382 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 MCOLN3Q8TDD5 553 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 LRRC8CQ8TDW0 803 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 PIGKQ92643 395 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 RHBDF1Q96CC6 855 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 FBXL8Q96CD0 374 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 CCDC126Q96EE4 140 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 HIST1H2AHQ96KK5 128 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 FOPNLQ96NB1 174 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 TMEM237Q96Q45 408 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 NRTNQ99748 197 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 HIST1H2AJQ99878 128 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 TMEM79Q9BSE2 394 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 H2AFJQ9BTM1 129 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 LRRC61Q9BV99 259 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 C1QTNF3Q9BXJ4 246 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 ERVK-6Q9BXR3 956 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 GSDMCQ9BYG8 508 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 TRIM54Q9BYV2 358 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 GSTO2Q9H4Y5 243 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 ERVMER34-1Q9H9K5 563 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 SLCO1B3Q9NPD5 702 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 ARL15Q9NXU5 204 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 ZNF624Q9P2J8 865 aaPredicted RBP6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 APOBEC3BQ9UH17 382 aaKnown RBP6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 CIDEBQ9UHD4 219 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 PFDN2Q9UHV9 154 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 TMCO1Q9UM00 188 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 ASF1AQ9Y294 204 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 PCDHGA2Q9Y5H1 932 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 SNX11Q9Y5W9 270 aa6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 CFAP20Q9Y6A4 193 aaKnown RBP6.83□□□□□ -1.32
LSM3P3-201ENST00000436601 TECTAO75443 2155 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 PLXNB3Q9ULL4 1909 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 TRBV23OR9-2A0A075B6M9 112 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 GMNCA6NCL1 334 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 OR52A4PA6NMU1 304 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 TMEM114B3SHH9 223 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 IFRD1O00458 451 aaPredicted RBP6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 E2F3O00716 465 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 PPP6CO00743 305 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 UBFD1O14562 309 aaKnown RBP6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 YY2O15391 372 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 NPHS1O60500 1241 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 EDF1O60869 148 aaKnown RBP6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 DNAJA2O60884 412 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 H2AFYO75367 372 aaKnown RBP6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 LYPLA1O75608 230 aaPredicted RBP6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 SUPT7LO94864 414 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 SLC16A8O95907 504 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 S100BP04271 92 aaPredicted RBP6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 CHRNGP07510 517 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 VIMP08670 466 aaKnown RBP6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 RPS17P08708 135 aaKnown RBP6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 ANXA5P08758 320 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 MTHFD1P11586 935 aaKnown RBP6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 F3P13726 295 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 CTSEP14091 401 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 GNSP15586 552 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 TSPAN8P19075 237 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 DRD4P21917 467 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 MAP4P27816 1152 aaKnown RBP6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 EEF1DP29692 281 aaKnown RBP6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 GDF5P43026 501 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 SLC6A12P48065 614 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 SLC1A6P48664 564 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 HSPA7P48741 367 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 CDH13P55290 713 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 AP1S2P56377 157 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 ABCE1P61221 599 aaKnown RBP6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 OCRLQ01968 901 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 ASPHQ12797 758 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 PRKG2Q13237 762 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 PCBP2Q15366 365 aaKnown RBP eCLIP6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 ARL13AQ5H913 290 aaPredicted RBP6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 ATG16L1Q676U5 607 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 IYDQ6PHW0 289 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 FAM47EQ6ZV65 393 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 CHSY3Q70JA7 882 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 TAF8Q7Z7C8 310 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 DCUN1D3Q8IWE4 304 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 LRRC56Q8IYG6 542 aaPredicted RBP6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 TBC1D21Q8IYX1 336 aa6.82□□□□□ -1.32
LSM3P3-201ENST00000436601 DTWD1Q8N5C7 304 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms