RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 LGI2Q8N0V4 545 aa4.24□□□□□ -1.73
HMGB1P45-201ENST00000435986 CARNMT1Q8N4J0 409 aa4.24□□□□□ -1.73
HMGB1P45-201ENST00000435986 DMBX1Q8NFW5 382 aa4.24□□□□□ -1.73
HMGB1P45-201ENST00000435986 OR13J1Q8NGT2 312 aa4.24□□□□□ -1.73
HMGB1P45-201ENST00000435986 ZNF473Q8WTR7 871 aaKnown RBP4.24□□□□□ -1.73
HMGB1P45-201ENST00000435986 NUDCD2Q8WVJ2 157 aa4.24□□□□□ -1.73
HMGB1P45-201ENST00000435986 N4BP2L2Q92802 583 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P45-201ENST00000435986 C1QTNF4Q9BXJ3 329 aa4.24□□□□□ -1.73
HMGB1P45-201ENST00000435986 ZMYND12Q9H0C1 365 aa4.24□□□□□ -1.73
HMGB1P45-201ENST00000435986 FAM49AQ9H0Q0 323 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P45-201ENST00000435986 CSTL1Q9H114 145 aa4.24□□□□□ -1.73
HMGB1P45-201ENST00000435986 HIPK2Q9H2X6 1198 aa4.24□□□□□ -1.73
HMGB1P45-201ENST00000435986 CHST11Q9NPF2 352 aa4.24□□□□□ -1.73
HMGB1P45-201ENST00000435986 CACNG4Q9UBN1 327 aa4.24□□□□□ -1.73
HMGB1P45-201ENST00000435986 XPO7Q9UIA9 1087 aaKnown RBP4.24□□□□□ -1.73
HMGB1P45-201ENST00000435986 FAF1Q9UNN5 650 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P45-201ENST00000435986 RABL2BQ9UNT1 228 aa4.24□□□□□ -1.73
HMGB1P45-201ENST00000435986 TNFRSF18Q9Y5U5 241 aa4.24□□□□□ -1.73
HMGB1P45-201ENST00000435986 PCDH11YQ9BZA8 1340 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 FEZF1A0PJY2 475 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 CTAGE9A4FU28 777 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 FAM86B1E9PN63 330 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 CAPN9O14815 690 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 ARPC2O15144 300 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 PPIP5K2O43314 1243 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 PNPP00491 289 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 FAM86B2P0C5J1 330 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 CTAGE8P0CG41 777 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 C8orf89P0DMQ9 161 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 ACP2P11117 423 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 STMN1P16949 149 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 CYP11B2P19099 503 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 DGKAP23743 735 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 CETN2P41208 172 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 ZNF132P52740 706 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 THOP1P52888 689 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 CDH11P55287 796 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 UBASH3AP57075 661 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 BRWD1-AS2P59051 145 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 ASIC1P78348 528 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 COASYQ13057 564 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 DMP1Q13316 513 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 PKN2Q16513 984 aaKnown RBP4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 SPSB3Q6PJ21 355 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 ZNF852Q6ZMS4 543 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 BTN2A1Q7KYR7 527 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 PLD3Q8IV08 490 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 CTAGE4Q8IX94 777 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 NAGSQ8N159 534 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 OR2T12Q8NG77 320 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 OR1J1Q8NGS3 322 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 NCOA7Q8NI08 942 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 OCC1Q8TAD7 63 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 SCARB1Q8WTV0 552 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 SEPT1Q8WYJ6 367 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 ATP6V0A1Q93050 837 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 FAM71F1Q96KD3 344 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 C17orf77Q96MU5 243 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 SPATA33Q96N06 139 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 ZNF583Q96ND8 569 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 RAD9AQ99638 391 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 HNRNPABQ99729 332 aaKnown RBP4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 PITPNM3Q9BZ71 974 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 ARRDC1-AS1Q9H2J1 176 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 Q9N2K0 584 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 FGF21Q9NSA1 209 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 DNAJC17Q9NVM6 304 aaKnown RBP4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 PTTG2Q9NZH5 202 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 PKD2L2Q9NZM6 624 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 TRPC4Q9UBN4 977 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 KNSTRNQ9Y448 316 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 PCDHGB1Q9Y5G3 927 aa4.23□□□□□ -1.73
HMGB1P45-201ENST00000435986 SMCHD1A6NHR9 2005 aa4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 C13orf42A0A1B0GVH6 325 aa4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 SRRM3A6NNA2 597 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 KBTBD13C9JR72 458 aa4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 MPHOSPH10O00566 681 aaKnown RBP4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 FLRT2O43155 660 aa4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 FCGR3BO75015 233 aa4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 GOSR1O95249 250 aa4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 SNRNP70P08621 437 aaKnown RBP4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 DESP17661 470 aa4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 ITIH1P19827 911 aa4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 JAK1P23458 1154 aa4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 TNNT2P45379 298 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 CACNG1Q06432 222 aa4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 DMPKQ09013 629 aa4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 KEAP1Q14145 624 aa4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 PTGISQ16647 500 aa4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 CA9Q16790 459 aa4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 UGT3A2Q3SY77 523 aa4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 PARP10Q53GL7 1025 aa4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 TMEM182Q6ZP80 229 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 CCDC73Q6ZRK6 1079 aa4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 C16orf82Q7Z2V1 217 aa4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 SLC9B2Q86UD5 537 aa4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 DNAJC22Q8N4W6 341 aa4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 CCDC63Q8NA47 563 aa4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 POC1AQ8NBT0 407 aa4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 OR13A1Q8NGR1 328 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms