RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 PHOSPHO1Q8TCT1 267 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 GAL3ST1Q99999 423 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 EBPLQ9BY08 206 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 KCNF1Q9H3M0 494 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 TMEM184CQ9NVA4 438 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 CLTCL1P53675 1640 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 TPST2O60704 377 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 RAD51DO75771 328 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 IFNA2P01563 188 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 CD40LGP29965 261 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 CDH12P55289 794 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 CLCQ05315 142 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 MERTKQ12866 999 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 MELKQ14680 651 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 GRHL3Q8TE85 626 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 NANOS1Q8WY41 292 aaKnown RBP10.95□□□□□ -0.66
SCN4A-201ENST00000435607 TOP1MTQ969P6 601 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 CYP3A7-CYP3A51PA0A087WV96 503 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 BORCS7-ASMTA0A0B4J1R7 106 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 ATF4P18848 351 aaPredicted RBP10.95□□□□□ -0.66
SCN4A-201ENST00000435607 GSTM3P21266 225 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 CYP3A7P24462 503 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 L1CAMP32004 1257 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 ACSL1P33121 698 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 ZNF844Q08AG5 666 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 ARHGAP22Q7Z5H3 698 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 JAGN1Q8N5M9 183 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 EZH1Q92800 747 aaPredicted RBP10.95□□□□□ -0.66
SCN4A-201ENST00000435607 GTPBP3Q969Y2 492 aaKnown RBP10.95□□□□□ -0.66
SCN4A-201ENST00000435607 BORCS7Q96B45 105 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 RADILQ96JH8 1075 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 TUBGCP5Q96RT8 1024 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 KCNS2Q9ULS6 477 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 INO80Q9ULG1 1556 aaPredicted RBP10.95□□□□□ -0.66
SCN4A-201ENST00000435607 A6NLC8 198 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 SCAMP1O15126 338 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 LDB2O43679 373 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 PFKLP17858 780 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 MAPK3P27361 379 aaPredicted RBP10.95□□□□□ -0.66
SCN4A-201ENST00000435607 SLC6A6P31641 620 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 TOB1P50616 345 aaPredicted RBP10.95□□□□□ -0.66
SCN4A-201ENST00000435607 HSD17B7P56937 341 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 CDKAL1Q5VV42 579 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 ANKK1Q8NFD2 765 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 BPIFB1Q8TDL5 484 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 PDLIM2Q96JY6 352 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 NPAS2Q99743 824 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 SUV39H2Q9H5I1 410 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 C1orf109Q9NX04 203 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 TEX13DA0A0J9YY54 714 aaPredicted RBP10.95□□□□□ -0.66
SCN4A-201ENST00000435607 OR4Q2P0C623 313 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 BMP8BP34820 402 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 DMWDQ09019 674 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 DHCR24Q15392 516 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 ZACNQ401N2 412 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 IDNKQ5T6J7 187 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 OGFRL1Q5TC84 451 aaPredicted RBP10.95□□□□□ -0.66
SCN4A-201ENST00000435607 MBLAC2Q68D91 279 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 BMP8AQ7Z5Y6 402 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 TMEM151BQ8IW70 566 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 SPAG16Q8N0X2 631 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 POF1BQ8WVV4 589 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 HMCESQ96FZ2 354 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 RPL10LQ96L21 214 aaKnown RBP10.95□□□□□ -0.66
SCN4A-201ENST00000435607 PARPBPQ9NWS1 579 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 RPL36Q9Y3U8 105 aaKnown RBP10.95□□□□□ -0.66
SCN4A-201ENST00000435607 TNS2Q63HR2 1409 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 PRAMEF33A0A0G2JMD5 474 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 MDFIC2A0A1B0GVS7 189 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 PCDH7O60245 1069 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 PRAMEF10O60809 474 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 FESP07332 822 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 EDNRAP25101 427 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 BST1Q10588 318 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 PCDH19Q8TAB3 1148 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 GORASP1Q9BQQ3 440 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 GRHPRQ9UBQ7 328 aa10.95□□□□□ -0.66
SCN4A-201ENST00000435607 A0A1W2PRB8 838 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 A0A1W2PRU2 124 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 KHNYNO15037 678 aaKnown RBP10.94□□□□□ -0.66
SCN4A-201ENST00000435607 ANGPTL1O95841 491 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 SEPHS1P49903 392 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 IFI35P80217 286 aaPredicted RBP10.94□□□□□ -0.66
SCN4A-201ENST00000435607 C1orf94Q6P1W5 598 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 BORAQ6PGQ7 559 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 RABEPKQ7Z6M1 372 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 THEM6Q8WUY1 208 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 NR4A3Q92570 626 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 PIWIL1Q96J94 861 aaKnown RBP10.94□□□□□ -0.66
SCN4A-201ENST00000435607 PHB2Q99623 299 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 TMEM175Q9BSA9 504 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 IL17RBQ9NRM6 502 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 HCN2Q9UL51 889 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 POFUT2Q9Y2G5 429 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 MBD5Q9P267 1494 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 hCG_1807616A0A1W2PRN6 198 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 DUX1O43812 170 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 ZMPSTE24O75844 475 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 AP2A1O95782 977 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 SLC6A4P31645 630 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms