RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 LGI4Q8N135 537 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 TBC1D19Q8N5T2 526 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 DNAJB8Q8NHS0 232 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 FAM110BQ8TC76 370 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 IPCEF1Q8WWN9 437 aaPredicted RBP12.32□□□□□ -0.44
CPNE4-201ENST00000429747 YME1L1Q96TA2 773 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 CORO1BQ9BR76 489 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 ZCCHC2Q9C0B9 1178 aaKnown RBP12.32□□□□□ -0.44
CPNE4-201ENST00000429747 FARSBQ9NSD9 589 aaKnown RBP12.32□□□□□ -0.44
CPNE4-201ENST00000429747 VPS29Q9UBQ0 182 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 GSTK1Q9Y2Q3 226 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 PEX16Q9Y5Y5 336 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 OAS3Q9Y6K5 1087 aaKnown RBP12.32□□□□□ -0.44
CPNE4-201ENST00000429747 RPS17P08708 135 aaKnown RBP12.32□□□□□ -0.44
CPNE4-201ENST00000429747 POLR2EP19388 210 aaKnown RBP12.32□□□□□ -0.44
CPNE4-201ENST00000429747 MATN1P21941 496 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 FUT4P22083 530 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 GJA5P36382 358 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 ANXA11P50995 505 aaKnown RBP12.32□□□□□ -0.44
CPNE4-201ENST00000429747 CYBRD1Q53TN4 286 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 KIAA1614Q5VZ46 1190 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 TMEM207Q6UWW9 146 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 DCDC5Q6ZRR9 648 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 ARRDC2Q8TBH0 407 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 PLD4Q96BZ4 506 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 ITPAQ9BY32 194 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 FAM83DQ9H4H8 585 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 TPT1P8Q9HAU6 139 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 CSNK1G1Q9HCP0 422 aa12.32□□□□□ -0.44
CPNE4-201ENST00000429747 GLTPD2A6NH11 291 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 ZNF701M0R085 212 aaPredicted RBP12.31□□□□□ -0.44
CPNE4-201ENST00000429747 LSM1O15116 133 aaKnown RBP12.31□□□□□ -0.44
CPNE4-201ENST00000429747 SNX4O95219 450 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 IFNW1P05000 195 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 S100A1P23297 94 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 MANFP55145 182 aaKnown RBP12.31□□□□□ -0.44
CPNE4-201ENST00000429747 RPS3AP61247 264 aaKnown RBP12.31□□□□□ -0.44
CPNE4-201ENST00000429747 RAPSNQ13702 412 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 SELPLGQ14242 412 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 SEMA3AQ14563 771 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 TBC1D25Q3MII6 688 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 IGFN1Q86VF2 1251 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 SNX29P2Q8IUI4 249 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 SPARTQ8N0X7 666 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 C1orf52Q8N6N3 182 aaKnown RBP12.31□□□□□ -0.44
CPNE4-201ENST00000429747 PROKR1Q8TCW9 393 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 SLCO4A1Q96BD0 722 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 LGALS12Q96DT0 336 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 PCDHGA11Q9Y5H2 935 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 RBM47A0AV96 593 aaKnown RBP12.31□□□□□ -0.44
CPNE4-201ENST00000429747 I6L893 689 aaPredicted RBP12.31□□□□□ -0.44
CPNE4-201ENST00000429747 AP2A2O94973 939 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 HPRP00739 348 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 SHMT2P34897 504 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 DCTP40126 519 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 FKBP1BP68106 108 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 MVKQ03426 396 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 SLC13A2Q13183 592 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 PLA2G4EQ3MJ16 856 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 USP43Q70EL4 1123 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 OR5AK3PQ8NH89 298 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 FCGR1BQ92637 280 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 DPH2Q9BQC3 489 aaPredicted RBP12.31□□□□□ -0.44
CPNE4-201ENST00000429747 BOCQ9BWV1 1114 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 SNTG1Q9NSN8 517 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 STMN3Q9NZ72 180 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 LYVE1Q9Y5Y7 322 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 FADS2P1A8MWK0 482 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 ZNF623O75123 536 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 C8GP07360 202 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 PTPN5P54829 565 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 DPY19L1Q2PZI1 675 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 CEP78Q5JTW2 689 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 TMPRSS11AQ6ZMR5 421 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 VTCN1Q7Z7D3 282 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 CYP4Z2PQ8N1L4 340 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 CD200R1Q8TD46 325 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 TEX37Q96LM6 180 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 MAGEB10Q96LZ2 347 aaPredicted RBP12.31□□□□□ -0.44
CPNE4-201ENST00000429747 PRRG3Q9BZD7 231 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 TM9SF3Q9HD45 589 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 WDR37Q9Y2I8 494 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 LOXHD1Q8IVV2 1947 aa12.31□□□□□ -0.44
CPNE4-201ENST00000429747 H3BM21 787 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 ERAL1O75616 437 aaKnown RBP12.3□□□□□ -0.44
CPNE4-201ENST00000429747 GADD45GO95257 159 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 GBAP04062 536 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 NR2F6P10588 404 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 POLR2IP36954 125 aaKnown RBP12.3□□□□□ -0.44
CPNE4-201ENST00000429747 MAGEA10P43363 369 aaPredicted RBP12.3□□□□□ -0.44
CPNE4-201ENST00000429747 DUOXA1Q1HG43 343 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 GPR33Q49SQ1 333 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 SCAIQ8N9R8 606 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 XAGE5Q8WWM1 108 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 GPR62Q9BZJ7 368 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 PAK1IP1Q9NWT1 392 aaPredicted RBP12.3□□□□□ -0.44
CPNE4-201ENST00000429747 RNF6Q9Y252 685 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 ASF1AQ9Y294 204 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.3□□□□□ -0.44
CPNE4-201ENST00000429747 M0QX08 132 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms