RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 MAGEB16A2A368 324 aa17.64■□□□□ 0.41
PSPC1-202ENST00000427943 ITGAXP20702 1163 aa17.64■□□□□ 0.41
PSPC1-202ENST00000427943 CLCN7P51798 805 aa17.64■□□□□ 0.41
PSPC1-202ENST00000427943 MLLT10P55197 1068 aa17.64■□□□□ 0.41
PSPC1-202ENST00000427943 VSX2P58304 361 aaPredicted RBP17.64■□□□□ 0.41
PSPC1-202ENST00000427943 MPP1Q00013 466 aa17.64■□□□□ 0.41
PSPC1-202ENST00000427943 TSTA3Q13630 321 aaPredicted RBP17.64■□□□□ 0.41
PSPC1-202ENST00000427943 RAPSNQ13702 412 aa17.64■□□□□ 0.41
PSPC1-202ENST00000427943 LONRF1Q17RB8 773 aa17.64■□□□□ 0.41
PSPC1-202ENST00000427943 RNASEH2BQ5TBB1 312 aaKnown RBP17.64■□□□□ 0.41
PSPC1-202ENST00000427943 MRPL14Q6P1L8 145 aaKnown RBP17.64■□□□□ 0.41
PSPC1-202ENST00000427943 ZNF549Q6P9A3 640 aa17.64■□□□□ 0.41
PSPC1-202ENST00000427943 SUSD1Q6UWL2 747 aa17.64■□□□□ 0.41
PSPC1-202ENST00000427943 MED25Q71SY5 747 aa17.64■□□□□ 0.41
PSPC1-202ENST00000427943 PPIL6Q8IXY8 311 aa17.64■□□□□ 0.41
PSPC1-202ENST00000427943 TMEM102Q8N9M5 508 aaPredicted RBP17.64■□□□□ 0.41
PSPC1-202ENST00000427943 OR2A1Q8NGT9 310 aa17.64■□□□□ 0.41
PSPC1-202ENST00000427943 OR9A1PQ8NGU1 263 aa17.64■□□□□ 0.41
PSPC1-202ENST00000427943 OR2Y1Q8NGV0 311 aa17.64■□□□□ 0.41
PSPC1-202ENST00000427943 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.64■□□□□ 0.41
PSPC1-202ENST00000427943 SIGLEC10Q96LC7 697 aa17.64■□□□□ 0.41
PSPC1-202ENST00000427943 SELENOSQ9BQE4 189 aa17.64■□□□□ 0.41
PSPC1-202ENST00000427943 DDX47Q9H0S4 455 aaKnown RBP17.64■□□□□ 0.41
PSPC1-202ENST00000427943 CCDC68Q9H2F9 335 aa17.64■□□□□ 0.41
PSPC1-202ENST00000427943 MLXIPLQ9NP71 852 aa17.64■□□□□ 0.41
PSPC1-202ENST00000427943 CUTCQ9NTM9 273 aa17.64■□□□□ 0.41
PSPC1-202ENST00000427943 ASIC3Q9UHC3 531 aa17.64■□□□□ 0.41
PSPC1-202ENST00000427943 PLAAQ9Y263 795 aa17.64■□□□□ 0.41
PSPC1-202ENST00000427943 MED16Q9Y2X0 877 aa17.64■□□□□ 0.41
PSPC1-202ENST00000427943 FLNCQ14315 2725 aa17.63■□□□□ 0.41
PSPC1-202ENST00000427943 DOCK10Q96BY6 2186 aa17.63■□□□□ 0.41
PSPC1-202ENST00000427943 A0A0J9YVX5 310 aa17.63■□□□□ 0.41
PSPC1-202ENST00000427943 DSCR3O14972 297 aa17.63■□□□□ 0.41
PSPC1-202ENST00000427943 PSIP1O75475 530 aaKnown RBP17.63■□□□□ 0.41
PSPC1-202ENST00000427943 BANF1O75531 89 aa17.63■□□□□ 0.41
PSPC1-202ENST00000427943 CEACAM4O75871 244 aa17.63■□□□□ 0.41
PSPC1-202ENST00000427943 FKBP9O95302 570 aa17.63■□□□□ 0.41
PSPC1-202ENST00000427943 ERGP11308 486 aa17.63■□□□□ 0.41
PSPC1-202ENST00000427943 ARSFP54793 590 aa17.63■□□□□ 0.41
PSPC1-202ENST00000427943 RRADP55042 308 aa17.63■□□□□ 0.41
PSPC1-202ENST00000427943 SSPNQ14714 243 aa17.63■□□□□ 0.41
PSPC1-202ENST00000427943 CYP2A13Q16696 494 aa17.63■□□□□ 0.41
PSPC1-202ENST00000427943 NADK2Q4G0N4 442 aa17.63■□□□□ 0.41
PSPC1-202ENST00000427943 FRMPD2BQ6IN97 320 aa17.63■□□□□ 0.41
PSPC1-202ENST00000427943 DTWD1Q8N5C7 304 aa17.63■□□□□ 0.41
PSPC1-202ENST00000427943 METTL27Q8N6F8 245 aaPredicted RBP17.63■□□□□ 0.41
PSPC1-202ENST00000427943 TTC29Q8NA56 475 aaPredicted RBP17.63■□□□□ 0.41
PSPC1-202ENST00000427943 ZUFSPQ96AP4 578 aa17.63■□□□□ 0.41
PSPC1-202ENST00000427943 SLC6A20Q9NP91 592 aa17.63■□□□□ 0.41
PSPC1-202ENST00000427943 FAM169AQ9Y6X4 670 aa17.63■□□□□ 0.41
PSPC1-202ENST00000427943 USP27XA6NNY8 438 aa17.62■□□□□ 0.41
PSPC1-202ENST00000427943 TARM1B6A8C7 271 aa17.62■□□□□ 0.41
PSPC1-202ENST00000427943 MYO1CO00159 1063 aa17.62■□□□□ 0.41
PSPC1-202ENST00000427943 MASP2O00187 686 aa17.62■□□□□ 0.41
PSPC1-202ENST00000427943 CES2O00748 559 aa17.62■□□□□ 0.41
PSPC1-202ENST00000427943 CATP04040 527 aaKnown RBP17.62■□□□□ 0.41
PSPC1-202ENST00000427943 UMODP07911 640 aa17.62■□□□□ 0.41
PSPC1-202ENST00000427943 CMPK1P30085 196 aa17.62■□□□□ 0.41
PSPC1-202ENST00000427943 GRM7Q14831 915 aa17.62■□□□□ 0.41
PSPC1-202ENST00000427943 TTLL9Q3SXZ7 439 aa17.62■□□□□ 0.41
PSPC1-202ENST00000427943 HSP90AA5PQ58FG0 334 aa17.62■□□□□ 0.41
PSPC1-202ENST00000427943 TCTE1Q5JU00 501 aa17.62■□□□□ 0.41
PSPC1-202ENST00000427943 PAPD7Q5XG87 772 aaKnown RBP17.62■□□□□ 0.41
PSPC1-202ENST00000427943 KCNMB4Q86W47 210 aa17.62■□□□□ 0.41
PSPC1-202ENST00000427943 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.62■□□□□ 0.41
PSPC1-202ENST00000427943 PPFIBP2Q8ND30 876 aa17.62■□□□□ 0.41
PSPC1-202ENST00000427943 ZNF285Q96NJ3 590 aa17.62■□□□□ 0.41
PSPC1-202ENST00000427943 PKP4Q99569 1192 aa17.62■□□□□ 0.41
PSPC1-202ENST00000427943 GPR21Q99679 349 aa17.62■□□□□ 0.41
PSPC1-202ENST00000427943 FAM114A2Q9NRY5 505 aa17.62■□□□□ 0.41
PSPC1-202ENST00000427943 IARS2Q9NSE4 1012 aaKnown RBP17.62■□□□□ 0.41
PSPC1-202ENST00000427943 GPR83Q9NYM4 423 aa17.62■□□□□ 0.41
PSPC1-202ENST00000427943 FBXO5Q9UKT4 447 aa17.62■□□□□ 0.41
PSPC1-202ENST00000427943 ZNF451Q9Y4E5 1061 aa17.62■□□□□ 0.41
PSPC1-202ENST00000427943 SHANK1Q9Y566 2161 aa17.62■□□□□ 0.41
PSPC1-202ENST00000427943 LOC105369274A0A096LPK9 316 aa17.61■□□□□ 0.41
PSPC1-202ENST00000427943 LOC102723532A0A0G2JNH3 316 aa17.61■□□□□ 0.41
PSPC1-202ENST00000427943 DNALI1O14645 258 aaPredicted RBP17.61■□□□□ 0.41
PSPC1-202ENST00000427943 SYF2O95926 243 aaKnown RBP17.61■□□□□ 0.41
PSPC1-202ENST00000427943 EIF2S1P05198 315 aaKnown RBP17.61■□□□□ 0.41
PSPC1-202ENST00000427943 CD63P08962 238 aa17.61■□□□□ 0.41
PSPC1-202ENST00000427943 RPA3P35244 121 aaPredicted RBP17.61■□□□□ 0.41
PSPC1-202ENST00000427943 DHX9Q08211 1270 aaKnown RBP17.61■□□□□ 0.41
PSPC1-202ENST00000427943 PTK6Q13882 451 aa17.61■□□□□ 0.41
PSPC1-202ENST00000427943 WASHC2DQ5SRD0 308 aa17.61■□□□□ 0.41
PSPC1-202ENST00000427943 COX15Q7KZN9 410 aa17.61■□□□□ 0.41
PSPC1-202ENST00000427943 RNF44Q7L0R7 432 aa17.61■□□□□ 0.41
PSPC1-202ENST00000427943 PPP1R32Q7Z5V6 425 aa17.61■□□□□ 0.41
PSPC1-202ENST00000427943 LMNTD2Q8IXW0 634 aa17.61■□□□□ 0.41
PSPC1-202ENST00000427943 CPNE9Q8IYJ1 553 aa17.61■□□□□ 0.41
PSPC1-202ENST00000427943 OR4N4Q8N0Y3 316 aa17.61■□□□□ 0.41
PSPC1-202ENST00000427943 CD200R1Q8TD46 325 aa17.61■□□□□ 0.41
PSPC1-202ENST00000427943 CALML6Q8TD86 181 aa17.61■□□□□ 0.41
PSPC1-202ENST00000427943 SMPDL3AQ92484 453 aa17.61■□□□□ 0.41
PSPC1-202ENST00000427943 KCNJ9Q92806 393 aa17.61■□□□□ 0.41
PSPC1-202ENST00000427943 MIB2Q96AX9 1013 aa17.61■□□□□ 0.41
PSPC1-202ENST00000427943 FKBP10Q96AY3 582 aa17.61■□□□□ 0.41
PSPC1-202ENST00000427943 CAPZA3Q96KX2 299 aa17.61■□□□□ 0.41
PSPC1-202ENST00000427943 FAM167BQ9BTA0 163 aa17.61■□□□□ 0.41
PSPC1-202ENST00000427943 DPH7Q9BTV6 452 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms