RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 CCNYL3P0C7X3 344 aa17.34■□□□□ 0.37
HERC3-205ENST00000426683 ZNF37AP17032 561 aaPredicted RBP17.34■□□□□ 0.37
HERC3-205ENST00000426683 IMPA1P29218 277 aa17.34■□□□□ 0.37
HERC3-205ENST00000426683 ECHS1P30084 290 aa17.34■□□□□ 0.37
HERC3-205ENST00000426683 CMPK1P30085 196 aa17.34■□□□□ 0.37
HERC3-205ENST00000426683 STAT5AP42229 794 aa17.34■□□□□ 0.37
HERC3-205ENST00000426683 GRIA3P42263 894 aa17.34■□□□□ 0.37
HERC3-205ENST00000426683 SLC12A2P55011 1212 aa17.34■□□□□ 0.37
HERC3-205ENST00000426683 FCRL6Q6DN72 434 aa17.34■□□□□ 0.37
HERC3-205ENST00000426683 CEP97Q8IW35 865 aa17.34■□□□□ 0.37
HERC3-205ENST00000426683 CCDC138Q96M89 665 aa17.34■□□□□ 0.37
HERC3-205ENST00000426683 FMO2Q99518 471 aa17.34■□□□□ 0.37
HERC3-205ENST00000426683 PARVBQ9HBI1 364 aa17.34■□□□□ 0.37
HERC3-205ENST00000426683 LHX9Q9NQ69 397 aa17.34■□□□□ 0.37
HERC3-205ENST00000426683 ABCF3Q9NUQ8 709 aa17.34■□□□□ 0.37
HERC3-205ENST00000426683 NINJ2Q9NZG7 142 aa17.34■□□□□ 0.37
HERC3-205ENST00000426683 PADI1Q9ULC6 663 aa17.34■□□□□ 0.37
HERC3-205ENST00000426683 PLCL2Q9UPR0 1127 aa17.34■□□□□ 0.37
HERC3-205ENST00000426683 PCDHB3Q9Y5E6 796 aa17.34■□□□□ 0.37
HERC3-205ENST00000426683 PCDHGA4Q9Y5G9 962 aa17.34■□□□□ 0.37
HERC3-205ENST00000426683 AHCTF1Q8WYP5 2266 aa17.33■□□□□ 0.37
HERC3-205ENST00000426683 E7ENX8 843 aa17.33■□□□□ 0.36
HERC3-205ENST00000426683 OR2B3O76000 313 aa17.33■□□□□ 0.36
HERC3-205ENST00000426683 HIST1H2AGP0C0S8 130 aaPredicted RBP17.33■□□□□ 0.36
HERC3-205ENST00000426683 HIST1H2ADP20671 130 aa17.33■□□□□ 0.36
HERC3-205ENST00000426683 YBX1P67809 324 aaKnown RBP17.33■□□□□ 0.36
HERC3-205ENST00000426683 POU4F1Q01851 419 aa17.33■□□□□ 0.36
HERC3-205ENST00000426683 TAP2Q03519 686 aa17.33■□□□□ 0.36
HERC3-205ENST00000426683 EFTUD2Q15029 972 aaKnown RBP eCLIP17.33■□□□□ 0.36
HERC3-205ENST00000426683 PHKG1Q16816 387 aa17.33■□□□□ 0.36
HERC3-205ENST00000426683 GRTP1Q5TC63 336 aa17.33■□□□□ 0.36
HERC3-205ENST00000426683 RELL1Q8IUW5 271 aa17.33■□□□□ 0.36
HERC3-205ENST00000426683 LRRC56Q8IYG6 542 aaPredicted RBP17.33■□□□□ 0.36
HERC3-205ENST00000426683 GPR135Q8IZ08 494 aa17.33■□□□□ 0.36
HERC3-205ENST00000426683 NKAPQ8N5F7 415 aaKnown RBP17.33■□□□□ 0.36
HERC3-205ENST00000426683 ZSCAN1Q8NBB4 408 aa17.33■□□□□ 0.36
HERC3-205ENST00000426683 SLC38A9Q8NBW4 561 aa17.33■□□□□ 0.36
HERC3-205ENST00000426683 SNRNP27Q8WVK2 155 aaKnown RBP17.33■□□□□ 0.36
HERC3-205ENST00000426683 ZUFSPQ96AP4 578 aa17.33■□□□□ 0.36
HERC3-205ENST00000426683 CLIP3Q96DZ5 547 aa17.33■□□□□ 0.36
HERC3-205ENST00000426683 PDLIM5Q96HC4 596 aaKnown RBP17.33■□□□□ 0.36
HERC3-205ENST00000426683 HIST1H2AHQ96KK5 128 aa17.33■□□□□ 0.36
HERC3-205ENST00000426683 HIST1H2AJQ99878 128 aa17.33■□□□□ 0.36
HERC3-205ENST00000426683 H2AFJQ9BTM1 129 aa17.33■□□□□ 0.36
HERC3-205ENST00000426683 EFHD1Q9BUP0 239 aa17.33■□□□□ 0.36
HERC3-205ENST00000426683 SLC7A5P2Q9GIP4 190 aa17.33■□□□□ 0.36
HERC3-205ENST00000426683 SPRTNQ9H040 489 aaPredicted RBP17.33■□□□□ 0.36
HERC3-205ENST00000426683 TSPYL1Q9H0U9 437 aa17.33■□□□□ 0.36
HERC3-205ENST00000426683 ACTR5Q9H9F9 607 aaPredicted RBP17.33■□□□□ 0.36
HERC3-205ENST00000426683 CAB39LQ9H9S4 337 aa17.33■□□□□ 0.36
HERC3-205ENST00000426683 POPDC3Q9HBV1 291 aa17.33■□□□□ 0.36
HERC3-205ENST00000426683 GPAMQ9HCL2 828 aa17.33■□□□□ 0.36
HERC3-205ENST00000426683 IRAK4Q9NWZ3 460 aa17.33■□□□□ 0.36
HERC3-205ENST00000426683 EURLQ9NYK6 297 aa17.33■□□□□ 0.36
HERC3-205ENST00000426683 STOX2Q9P2F5 926 aaPredicted RBP17.33■□□□□ 0.36
HERC3-205ENST00000426683 TAC3Q9UHF0 121 aa17.33■□□□□ 0.36
HERC3-205ENST00000426683 CROTQ9UKG9 612 aa17.33■□□□□ 0.36
HERC3-205ENST00000426683 PABPN1LA6NDY0 278 aaKnown RBP17.32■□□□□ 0.36
HERC3-205ENST00000426683 TARM1B6A8C7 271 aa17.32■□□□□ 0.36
HERC3-205ENST00000426683 ZNF749O43361 778 aa17.32■□□□□ 0.36
HERC3-205ENST00000426683 FAM155BO75949 473 aa17.32■□□□□ 0.36
HERC3-205ENST00000426683 CTSBP07858 339 aa17.32■□□□□ 0.36
HERC3-205ENST00000426683 PHBP35232 272 aa17.32■□□□□ 0.36
HERC3-205ENST00000426683 SPRP35270 261 aaPredicted RBP17.32■□□□□ 0.36
HERC3-205ENST00000426683 DLSTP36957 453 aa17.32■□□□□ 0.36
HERC3-205ENST00000426683 GPS2Q13227 327 aa17.32■□□□□ 0.36
HERC3-205ENST00000426683 NAB1Q13506 487 aa17.32■□□□□ 0.36
HERC3-205ENST00000426683 USP10Q14694 798 aaKnown RBP17.32■□□□□ 0.36
HERC3-205ENST00000426683 ZC3H12BQ5HYM0 836 aaKnown RBP17.32■□□□□ 0.36
HERC3-205ENST00000426683 MBOAT1Q6ZNC8 495 aa17.32■□□□□ 0.36
HERC3-205ENST00000426683 MCATQ8IVS2 390 aaKnown RBP17.32■□□□□ 0.36
HERC3-205ENST00000426683 LRRN4CLQ8ND94 238 aa17.32■□□□□ 0.36
HERC3-205ENST00000426683 TSPAN17Q96FV3 270 aa17.32■□□□□ 0.36
HERC3-205ENST00000426683 GPR22Q99680 433 aa17.32■□□□□ 0.36
HERC3-205ENST00000426683 DPH7Q9BTV6 452 aa17.32■□□□□ 0.36
HERC3-205ENST00000426683 CDC42EP4Q9H3Q1 356 aaKnown RBP17.32■□□□□ 0.36
HERC3-205ENST00000426683 SLC6A20Q9NP91 592 aa17.32■□□□□ 0.36
HERC3-205ENST00000426683 MRPS30Q9NP92 439 aaKnown RBP17.32■□□□□ 0.36
HERC3-205ENST00000426683 IL17BQ9UHF5 180 aa17.32■□□□□ 0.36
HERC3-205ENST00000426683 IKZF3Q9UKT9 509 aa17.32■□□□□ 0.36
HERC3-205ENST00000426683 KLK4Q9Y5K2 254 aa17.32■□□□□ 0.36
HERC3-205ENST00000426683 H3BMH7 237 aa17.31■□□□□ 0.36
HERC3-205ENST00000426683 CCNDBP1O95273 360 aa17.31■□□□□ 0.36
HERC3-205ENST00000426683 RHOXF2BP0C7M4 288 aa17.31■□□□□ 0.36
HERC3-205ENST00000426683 NAA25Q14CX7 972 aa17.31■□□□□ 0.36
HERC3-205ENST00000426683 UBAP2Q5T6F2 1119 aaKnown RBP17.31■□□□□ 0.36
HERC3-205ENST00000426683 THEMIS2Q5TEJ8 643 aa17.31■□□□□ 0.36
HERC3-205ENST00000426683 ICE2Q659A1 982 aa17.31■□□□□ 0.36
HERC3-205ENST00000426683 FAM199XQ6PEV8 388 aaPredicted RBP17.31■□□□□ 0.36
HERC3-205ENST00000426683 AGTRAPQ6RW13 159 aa17.31■□□□□ 0.36
HERC3-205ENST00000426683 IFT20Q8IY31 132 aa17.31■□□□□ 0.36
HERC3-205ENST00000426683 CT55Q8WUE5 264 aa17.31■□□□□ 0.36
HERC3-205ENST00000426683 ANKRD49Q8WVL7 239 aa17.31■□□□□ 0.36
HERC3-205ENST00000426683 MR1Q95460 341 aa17.31■□□□□ 0.36
HERC3-205ENST00000426683 LRFN5Q96NI6 719 aa17.31■□□□□ 0.36
HERC3-205ENST00000426683 RHOXF2Q9BQY4 288 aa17.31■□□□□ 0.36
HERC3-205ENST00000426683 TRIM54Q9BYV2 358 aa17.31■□□□□ 0.36
HERC3-205ENST00000426683 AKIRIN1Q9H9L7 192 aaPredicted RBP17.31■□□□□ 0.36
HERC3-205ENST00000426683 CCDC177Q9NQR7 707 aaPredicted RBP17.31■□□□□ 0.36
HERC3-205ENST00000426683 PCMTD2Q9NV79 361 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms