RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 FBXO25Q8TCJ0 367 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 MAGEC3Q8TD91 643 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 ASB11Q8WXH4 323 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 DLG3Q92796 817 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 N4BP2L2Q92802 583 aaPredicted RBP13.1□□□□□ -0.31
SNX3-204ENST00000426155 SLC22A18Q96BI1 424 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 LINGO1Q96FE5 620 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 CHST8Q9H2A9 424 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 ACTL8Q9H568 366 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 SLC6A20Q9NP91 592 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 ABCF3Q9NUQ8 709 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 TAS2R13Q9NYV9 303 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 ZFATQ9P243 1243 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 KLHL42Q9P2K6 505 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 MRFAP1Q9Y605 127 aa13.1□□□□□ -0.31
SNX3-204ENST00000426155 CXorf49A8MYA2 514 aaPredicted RBP13.09□□□□□ -0.31
SNX3-204ENST00000426155 GFYI3L273 518 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 MEN1O00255 615 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 CTSVO60911 334 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 OR2B3O76000 313 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 TSPAN12O95859 305 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 SLC16A8O95907 504 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 ENO3P13929 434 aaPredicted RBP13.09□□□□□ -0.31
SNX3-204ENST00000426155 SAT1P21673 171 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 FDXRP22570 491 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 PNLIPRP1P54315 467 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 PLTPP55058 493 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 NFKB2Q00653 900 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 MGAT5Q09328 741 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 ERV3-1Q14264 604 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 ZNF460Q14592 562 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 SLC9A5Q14940 896 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 CYP2A13Q16696 494 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 C1orf189Q5VU69 101 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 C8orf74Q6P047 294 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 FIGLAQ6QHK4 219 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 FAM198BQ6UWH4 519 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 STRA8Q7Z7C7 330 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 GALNT7Q86SF2 657 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 CCDC25Q86WR0 208 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 SYTL1Q8IYJ3 562 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 DTWD1Q8N5C7 304 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 ZNF655Q8N720 491 aaPredicted RBP13.09□□□□□ -0.31
SNX3-204ENST00000426155 OR2L3Q8NG85 312 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 GABPB2Q8TAK5 448 aaPredicted RBP13.09□□□□□ -0.31
SNX3-204ENST00000426155 PYROXD1Q8WU10 500 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 ZNF480Q8WV37 535 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 LRRC1Q9BTT6 524 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 SLC7A5P2Q9GIP4 190 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 SYNPO2LQ9H987 977 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 SYTL2Q9HCH5 934 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 FAM114A2Q9NRY5 505 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 STARD5Q9NSY2 213 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 IRAK4Q9NWZ3 460 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 EURLQ9NYK6 297 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 MOCS1Q9NZB8 636 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 DHCR7Q9UBM7 475 aaKnown RBP13.09□□□□□ -0.31
SNX3-204ENST00000426155 SERTAD3Q9UJW9 196 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 IKZF3Q9UKT9 509 aa13.09□□□□□ -0.31
SNX3-204ENST00000426155 UTP11Q9Y3A2 253 aaKnown RBP13.09□□□□□ -0.31
SNX3-204ENST00000426155 SEC16AO15027 2179 aa13.08□□□□□ -0.31
SNX3-204ENST00000426155 ZSCAN9O15535 394 aaPredicted RBP13.08□□□□□ -0.32
SNX3-204ENST00000426155 CBSLP0DN79 551 aa13.08□□□□□ -0.32
SNX3-204ENST00000426155 IMPA1P29218 277 aa13.08□□□□□ -0.32
SNX3-204ENST00000426155 CBSP35520 551 aa13.08□□□□□ -0.32
SNX3-204ENST00000426155 FOXL2P58012 376 aa13.08□□□□□ -0.32
SNX3-204ENST00000426155 GPX6P59796 221 aa13.08□□□□□ -0.32
SNX3-204ENST00000426155 IL10RAQ13651 578 aa13.08□□□□□ -0.32
SNX3-204ENST00000426155 FRG1Q14331 258 aaKnown RBP13.08□□□□□ -0.32
SNX3-204ENST00000426155 PHKG1Q16816 387 aa13.08□□□□□ -0.32
SNX3-204ENST00000426155 DEFB109BQ30KR1 87 aa13.08□□□□□ -0.32
SNX3-204ENST00000426155 ZNF385CQ66K41 422 aaPredicted RBP13.08□□□□□ -0.32
SNX3-204ENST00000426155 FRMPD2BQ6IN97 320 aa13.08□□□□□ -0.32
SNX3-204ENST00000426155 FAM45BPQ6NSW5 357 aa13.08□□□□□ -0.32
SNX3-204ENST00000426155 TMEM207Q6UWW9 146 aa13.08□□□□□ -0.32
SNX3-204ENST00000426155 ZNF517Q6ZMY9 492 aaPredicted RBP13.08□□□□□ -0.32
SNX3-204ENST00000426155 ZC3HC1Q86WB0 502 aaKnown RBP13.08□□□□□ -0.32
SNX3-204ENST00000426155 TMEM151BQ8IW70 566 aa13.08□□□□□ -0.32
SNX3-204ENST00000426155 GPR135Q8IZ08 494 aa13.08□□□□□ -0.32
SNX3-204ENST00000426155 NOA1Q8NC60 698 aaKnown RBP13.08□□□□□ -0.32
SNX3-204ENST00000426155 FBXO15Q8NCQ5 510 aaPredicted RBP13.08□□□□□ -0.32
SNX3-204ENST00000426155 FAM45AQ8TCE6 357 aa13.08□□□□□ -0.32
SNX3-204ENST00000426155 LRFN5Q96NI6 719 aa13.08□□□□□ -0.32
SNX3-204ENST00000426155 EFHD1Q9BUP0 239 aa13.08□□□□□ -0.32
SNX3-204ENST00000426155 CHRNA10Q9GZZ6 450 aa13.08□□□□□ -0.32
SNX3-204ENST00000426155 RAB17Q9H0T7 212 aa13.08□□□□□ -0.32
SNX3-204ENST00000426155 TAC3Q9UHF0 121 aa13.08□□□□□ -0.32
SNX3-204ENST00000426155 PLCL2Q9UPR0 1127 aa13.08□□□□□ -0.32
SNX3-204ENST00000426155 IGKV1-8A0A0C4DH67 115 aa13.07□□□□□ -0.32
SNX3-204ENST00000426155 A0A0J9YVX5 310 aa13.07□□□□□ -0.32
SNX3-204ENST00000426155 FAM95CA0A1B0GW59 222 aa13.07□□□□□ -0.32
SNX3-204ENST00000426155 CDC14CA4D256 554 aa13.07□□□□□ -0.32
SNX3-204ENST00000426155 EIF4E1BA6NMX2 242 aaKnown RBP13.07□□□□□ -0.32
SNX3-204ENST00000426155 C21orf140B9A014 251 aa13.07□□□□□ -0.32
SNX3-204ENST00000426155 E7ENX8 843 aa13.07□□□□□ -0.32
SNX3-204ENST00000426155 NDC80O14777 642 aa13.07□□□□□ -0.32
SNX3-204ENST00000426155 CREG1O75629 220 aa13.07□□□□□ -0.32
SNX3-204ENST00000426155 ITGB2P05107 769 aa13.07□□□□□ -0.32
SNX3-204ENST00000426155 CAPN1P07384 714 aa13.07□□□□□ -0.32
SNX3-204ENST00000426155 RPA3P35244 121 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 269.2 ms