RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 ADGRA1Q86SQ6 560 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 TMPRSS11BQ86T26 416 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 CDC20BQ86Y33 519 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 Q8N377 158 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 MINDY1Q8N5J2 469 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 MCUQ8NE86 351 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 APPL2Q8NEU8 664 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 ZNF519Q8TB69 540 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 SLAMF9Q96A28 289 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 URM1Q9BTM9 101 aaKnown RBP3.33□□□□□ -1.88
LINC00397-201ENST00000422074 MXD3Q9BW11 206 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 TBC1D17Q9HA65 648 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 PANK4Q9NVE7 773 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 GDE1Q9NZC3 331 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 CRNNQ9UBG3 495 aaPredicted RBP3.33□□□□□ -1.88
LINC00397-201ENST00000422074 MAN1B1Q9UKM7 699 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 STUB1Q9UNE7 303 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 PPP2R2CQ9Y2T4 447 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 AHCYL1O43865 530 aa3.32□□□□□ -1.88
LINC00397-201ENST00000422074 KRT33AO76009 404 aa3.32□□□□□ -1.88
LINC00397-201ENST00000422074 IGHV2-70P01814 119 aa3.32□□□□□ -1.88
LINC00397-201ENST00000422074 CDH3P22223 829 aa3.32□□□□□ -1.88
LINC00397-201ENST00000422074 RBMS1P29558 406 aaKnown RBP3.32□□□□□ -1.88
LINC00397-201ENST00000422074 ALDH3A2P51648 485 aa3.32□□□□□ -1.88
LINC00397-201ENST00000422074 STAT2P52630 851 aa3.32□□□□□ -1.88
LINC00397-201ENST00000422074 GCNT1Q02742 428 aa3.32□□□□□ -1.88
LINC00397-201ENST00000422074 GUCY2DQ02846 1103 aa3.32□□□□□ -1.88
LINC00397-201ENST00000422074 CALD1Q05682 793 aaKnown RBP3.32□□□□□ -1.88
LINC00397-201ENST00000422074 PRPF4BQ13523 1007 aaKnown RBP3.32□□□□□ -1.88
LINC00397-201ENST00000422074 CBWD6Q4V339 395 aa3.32□□□□□ -1.88
LINC00397-201ENST00000422074 CBWD3Q5JTY5 395 aa3.32□□□□□ -1.88
LINC00397-201ENST00000422074 SLC35D3Q5M8T2 416 aa3.32□□□□□ -1.88
LINC00397-201ENST00000422074 TMEM211Q6ICI0 200 aa3.32□□□□□ -1.88
LINC00397-201ENST00000422074 UGT3A1Q6NUS8 523 aa3.32□□□□□ -1.88
LINC00397-201ENST00000422074 ZNF595Q8IYB9 648 aa3.32□□□□□ -1.88
LINC00397-201ENST00000422074 OR13C3Q8NGS6 347 aa3.32□□□□□ -1.88
LINC00397-201ENST00000422074 PRPF31Q8WWY3 499 aaKnown RBP3.32□□□□□ -1.88
LINC00397-201ENST00000422074 FAM20AQ96MK3 541 aa3.32□□□□□ -1.88
LINC00397-201ENST00000422074 TRIM6Q9C030 488 aaPredicted RBP3.32□□□□□ -1.88
LINC00397-201ENST00000422074 MTMR12Q9C0I1 747 aa3.32□□□□□ -1.88
LINC00397-201ENST00000422074 SLC35C2Q9NQQ7 365 aa3.32□□□□□ -1.88
LINC00397-201ENST00000422074 DPP3Q9NY33 737 aa3.32□□□□□ -1.88
LINC00397-201ENST00000422074 MRPL15Q9P015 296 aaKnown RBP3.32□□□□□ -1.88
LINC00397-201ENST00000422074 THEGQ9P2T0 379 aa3.32□□□□□ -1.88
LINC00397-201ENST00000422074 MOB4Q9Y3A3 225 aa3.32□□□□□ -1.88
LINC00397-201ENST00000422074 TTLL3Q9Y4R7 772 aa3.32□□□□□ -1.88
LINC00397-201ENST00000422074 SNX8Q9Y5X2 465 aa3.32□□□□□ -1.88
LINC00397-201ENST00000422074 A0A1W2PPQ1 181 aa3.31□□□□□ -1.88
LINC00397-201ENST00000422074 SERINC4A6NH21 518 aa3.31□□□□□ -1.88
LINC00397-201ENST00000422074 IDH3BO43837 385 aa3.31□□□□□ -1.88
LINC00397-201ENST00000422074 GJB3O75712 270 aa3.31□□□□□ -1.88
LINC00397-201ENST00000422074 DDHD2O94830 711 aa3.31□□□□□ -1.88
LINC00397-201ENST00000422074 BCL10O95999 233 aa3.31□□□□□ -1.88
LINC00397-201ENST00000422074 ACADSP16219 412 aa3.31□□□□□ -1.88
LINC00397-201ENST00000422074 HLA-FP30511 346 aa3.31□□□□□ -1.88
LINC00397-201ENST00000422074 NNMTP40261 264 aa3.31□□□□□ -1.88
LINC00397-201ENST00000422074 PTGER3P43115 390 aa3.31□□□□□ -1.88
LINC00397-201ENST00000422074 CCR10P46092 362 aa3.31□□□□□ -1.88
LINC00397-201ENST00000422074 RPL21P46778 160 aaKnown RBP3.31□□□□□ -1.88
LINC00397-201ENST00000422074 PGFP49763 221 aa3.31□□□□□ -1.88
LINC00397-201ENST00000422074 CDH13P55290 713 aa3.31□□□□□ -1.88
LINC00397-201ENST00000422074 TMEM50BP56557 158 aa3.31□□□□□ -1.88
LINC00397-201ENST00000422074 KCTD2Q14681 263 aa3.31□□□□□ -1.88
LINC00397-201ENST00000422074 LCN1P1Q5VSP4 162 aa3.31□□□□□ -1.88
LINC00397-201ENST00000422074 GPR139Q6DWJ6 353 aa3.31□□□□□ -1.88
LINC00397-201ENST00000422074 C11orf63Q6NUN7 778 aa3.31□□□□□ -1.88
LINC00397-201ENST00000422074 GPRIN3Q6ZVF9 776 aa3.31□□□□□ -1.88
LINC00397-201ENST00000422074 ENOSF1Q7L5Y1 443 aa3.31□□□□□ -1.88
LINC00397-201ENST00000422074 VANGL1Q8TAA9 524 aaPredicted RBP3.31□□□□□ -1.88
LINC00397-201ENST00000422074 MAPK15Q8TD08 544 aa3.31□□□□□ -1.88
LINC00397-201ENST00000422074 APOBEC4Q8WW27 367 aaKnown RBP3.31□□□□□ -1.88
LINC00397-201ENST00000422074 ATL1Q8WXF7 558 aa3.31□□□□□ -1.88
LINC00397-201ENST00000422074 CENPTQ96BT3 561 aa3.31□□□□□ -1.88
LINC00397-201ENST00000422074 TMCO6Q96DC7 493 aa3.31□□□□□ -1.88
LINC00397-201ENST00000422074 SPDL1Q96EA4 605 aa3.31□□□□□ -1.88
LINC00397-201ENST00000422074 ARSGQ96EG1 525 aa3.31□□□□□ -1.88
LINC00397-201ENST00000422074 PRICKLE1Q96MT3 831 aaPredicted RBP3.31□□□□□ -1.88
LINC00397-201ENST00000422074 DGCR6LQ9BY27 220 aa3.31□□□□□ -1.88
LINC00397-201ENST00000422074 PANK3Q9H999 370 aa3.31□□□□□ -1.88
LINC00397-201ENST00000422074 PPANQ9NQ55 473 aaKnown RBP3.31□□□□□ -1.88
LINC00397-201ENST00000422074 FAM207AQ9NSI2 230 aaPredicted RBP3.31□□□□□ -1.88
LINC00397-201ENST00000422074 ABT1Q9ULW3 272 aaKnown RBP3.31□□□□□ -1.88
LINC00397-201ENST00000422074 ZHX2Q9Y6X8 837 aa3.31□□□□□ -1.88
LINC00397-201ENST00000422074 A0A1W2PR80 420 aa3.3□□□□□ -1.88
LINC00397-201ENST00000422074 NEMP2A6NFY4 417 aa3.3□□□□□ -1.88
LINC00397-201ENST00000422074 GLOD5A6NK44 160 aa3.3□□□□□ -1.88
LINC00397-201ENST00000422074 EPHB6O15197 1021 aa3.3□□□□□ -1.88
LINC00397-201ENST00000422074 IPO8O15397 1037 aaKnown RBP3.3□□□□□ -1.88
LINC00397-201ENST00000422074 MAGEC1O60732 1142 aa3.3□□□□□ -1.88
LINC00397-201ENST00000422074 CENPBP07199 599 aaPredicted RBP3.3□□□□□ -1.88
LINC00397-201ENST00000422074 SMIM18P0DKX4 95 aa3.3□□□□□ -1.88
LINC00397-201ENST00000422074 HAPLN1P10915 354 aaPredicted RBP3.3□□□□□ -1.88
LINC00397-201ENST00000422074 SLC2A2P11168 524 aaPredicted RBP3.3□□□□□ -1.88
LINC00397-201ENST00000422074 PTPN3P26045 913 aa3.3□□□□□ -1.88
LINC00397-201ENST00000422074 CSTF2P33240 577 aaKnown RBP eCLIP3.3□□□□□ -1.88
LINC00397-201ENST00000422074 KRT20P35900 424 aa3.3□□□□□ -1.88
LINC00397-201ENST00000422074 RAD52P43351 418 aa3.3□□□□□ -1.88
LINC00397-201ENST00000422074 HNRNPKP61978 463 aaKnown RBP eCLIP3.3□□□□□ -1.88
LINC00397-201ENST00000422074 PSMC6P62333 389 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms