RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 ROPN1BQ9BZX4 212 aaPredicted RBP3.3□□□□□ -1.88
SDCBPP3-201ENST00000419629 CUEDC2Q9H467 287 aa3.3□□□□□ -1.88
SDCBPP3-201ENST00000419629 DENND2DQ9H6A0 471 aaPredicted RBP3.3□□□□□ -1.88
SDCBPP3-201ENST00000419629 NHEJ1Q9H9Q4 299 aaPredicted RBP3.3□□□□□ -1.88
SDCBPP3-201ENST00000419629 C17orf75Q9HAS0 396 aa3.3□□□□□ -1.88
SDCBPP3-201ENST00000419629 ROPN1Q9HAT0 212 aaPredicted RBP3.3□□□□□ -1.88
SDCBPP3-201ENST00000419629 POLD4Q9HCU8 107 aa3.3□□□□□ -1.88
SDCBPP3-201ENST00000419629 IL1RAPL2Q9NP60 686 aa3.3□□□□□ -1.88
SDCBPP3-201ENST00000419629 OCIAD1Q9NX40 245 aa3.3□□□□□ -1.88
SDCBPP3-201ENST00000419629 NKIRAS1Q9NYS0 192 aa3.3□□□□□ -1.88
SDCBPP3-201ENST00000419629 HSPB7Q9UBY9 170 aa3.3□□□□□ -1.88
SDCBPP3-201ENST00000419629 TRIM10Q9UDY6 481 aa3.3□□□□□ -1.88
SDCBPP3-201ENST00000419629 STK39Q9UEW8 545 aa3.3□□□□□ -1.88
SDCBPP3-201ENST00000419629 MTRF1LQ9UGC7 380 aaKnown RBP3.3□□□□□ -1.88
SDCBPP3-201ENST00000419629 SLCO3A1Q9UIG8 710 aa3.3□□□□□ -1.88
SDCBPP3-201ENST00000419629 GNPTGQ9UJJ9 305 aa3.3□□□□□ -1.88
SDCBPP3-201ENST00000419629 ERVK-11Q9UQG0 969 aa3.3□□□□□ -1.88
SDCBPP3-201ENST00000419629 AAR2Q9Y312 384 aaKnown RBP3.3□□□□□ -1.88
SDCBPP3-201ENST00000419629 NOSIPQ9Y314 301 aaKnown RBP3.3□□□□□ -1.88
SDCBPP3-201ENST00000419629 UTP11Q9Y3A2 253 aaKnown RBP3.3□□□□□ -1.88
SDCBPP3-201ENST00000419629 NEXMIFQ5QGS0 1516 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 KIF26BQ2KJY2 2108 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 ATP8B3O60423 1300 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 MAP3K19Q56UN5 1328 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 GOLGA8QA0A0J9YX86 632 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 A0A1B0GVC2 190 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 TTC26A0AVF1 554 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 GOLGA8OA6NCC3 632 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 SERINC4A6NH21 518 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 TCP11X1B4DZS4 312 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 GOLGA8NF8WBI6 632 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 GOLGA8RI6L899 631 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 ZNF701M0R085 212 aaPredicted RBP3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 PGRMC1O00264 195 aaKnown RBP3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 TAF4O00268 1085 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 KPNA4O00629 521 aaPredicted RBP3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 SH2B2O14492 632 aaPredicted RBP3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 RASGRF2O14827 1237 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 HAT1O14929 419 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 SLC22A1O15245 554 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 ALOX15BO15296 676 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 RAD51CO43502 376 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 BUB3O43684 328 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 KLK8O60259 260 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 ENTPD5O75356 428 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 SPAG7O75391 227 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 TOMM70O94826 608 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 TNFAIP8O95379 198 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 CTDNEP1O95476 244 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 CRYZL1O95825 349 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 CLPTM1O96005 669 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 SHBGP04278 402 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 LDHCP07864 332 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 UQCRBP14927 111 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 AGAP20933 346 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 BDNFP23560 247 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 RRM1P23921 792 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 ITGB8P26012 769 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 CPOXP36551 454 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 HSPA13P48723 471 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 PDLIM4P50479 330 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 CCR3P51677 355 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 BLVRAP53004 296 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 ATP6V0D1P61421 351 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 UBXN1Q04323 297 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 EEF1A2Q05639 463 aaKnown RBP3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 LRRC63Q05C16 580 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 NIPAL4Q0D2K0 466 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 COX10Q12887 443 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 PTP4A2Q12974 167 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 CDC16Q13042 620 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 MYBPHQ13203 477 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 SNTA1Q13424 505 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 TNFAIP1Q13829 316 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 CYTH1Q15438 398 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 PRICKLE4Q2TBC4 344 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 AMZ1Q400G9 498 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 ANKRD20A4Q4UJ75 823 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 ATP13A5Q4VNC0 1218 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 HSP90AA4PQ58FG1 418 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 SLC45A4Q5BKX6 768 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 TCP11X2Q5H9J9 407 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 ACAD10Q6JQN1 1059 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 SLC51BQ86UW2 128 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 ITIH5Q86UX2 942 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 HEATR4Q86WZ0 1026 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 TDRPQ86YL5 185 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 MMAAQ8IVH4 418 aaKnown RBP3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 TTC30BQ8N4P2 665 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 DCLK2Q8N568 766 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 ATP6V0D2Q8N8Y2 350 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 CCDC89Q8N998 374 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 KCNH5Q8NCM2 988 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 CATSPER1Q8NEC5 780 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 LILRB4Q8NHJ6 448 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 LILRB1Q8NHL6 650 aaPredicted RBP3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 ANGPTL6Q8NI99 470 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 ACTRT1Q8TDG2 376 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 CHPT1Q8WUD6 406 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 PRPF31Q8WWY3 499 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms