RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 FAM117AQ9C073 453 aa19.53■□□□□ 0.72
GTF3A-202ENST00000419181 EURLQ9NYK6 297 aa19.53■□□□□ 0.72
GTF3A-202ENST00000419181 GRHL1Q9NZI5 618 aa19.53■□□□□ 0.72
GTF3A-202ENST00000419181 SPTA1P02549 2419 aa19.52■□□□□ 0.72
GTF3A-202ENST00000419181 TARM1B6A8C7 271 aa19.52■□□□□ 0.72
GTF3A-202ENST00000419181 ZSCAN9O15535 394 aaPredicted RBP19.52■□□□□ 0.72
GTF3A-202ENST00000419181 SLC16A8O95907 504 aa19.52■□□□□ 0.72
GTF3A-202ENST00000419181 HSD17B2P37059 387 aa19.52■□□□□ 0.72
GTF3A-202ENST00000419181 GRIA3P42263 894 aa19.52■□□□□ 0.72
GTF3A-202ENST00000419181 RPS15P62841 145 aaKnown RBP19.52■□□□□ 0.72
GTF3A-202ENST00000419181 ERV3-1Q14264 604 aa19.52■□□□□ 0.72
GTF3A-202ENST00000419181 PTCHD3Q3KNS1 767 aa19.52■□□□□ 0.72
GTF3A-202ENST00000419181 LRRC8EQ6NSJ5 796 aa19.52■□□□□ 0.72
GTF3A-202ENST00000419181 FAM198BQ6UWH4 519 aa19.52■□□□□ 0.72
GTF3A-202ENST00000419181 SMPDL3AQ92484 453 aa19.52■□□□□ 0.72
GTF3A-202ENST00000419181 ZUFSPQ96AP4 578 aa19.52■□□□□ 0.72
GTF3A-202ENST00000419181 C16orf45Q96MC5 204 aaPredicted RBP19.52■□□□□ 0.72
GTF3A-202ENST00000419181 DPH2Q9BQC3 489 aaPredicted RBP19.52■□□□□ 0.72
GTF3A-202ENST00000419181 SLC7A5P2Q9GIP4 190 aa19.52■□□□□ 0.72
GTF3A-202ENST00000419181 MOCS1Q9NZB8 636 aa19.52■□□□□ 0.72
GTF3A-202ENST00000419181 CORO1CQ9ULV4 474 aaPredicted RBP19.52■□□□□ 0.72
GTF3A-202ENST00000419181 ZNF462Q96JM2 2506 aa19.52■□□□□ 0.71
GTF3A-202ENST00000419181 CAPN1P07384 714 aa19.51■□□□□ 0.71
GTF3A-202ENST00000419181 FURINP09958 794 aa19.51■□□□□ 0.71
GTF3A-202ENST00000419181 RAB40ALP0C0E4 278 aa19.51■□□□□ 0.71
GTF3A-202ENST00000419181 CCR10P46092 362 aa19.51■□□□□ 0.71
GTF3A-202ENST00000419181 PNLIPRP1P54315 467 aa19.51■□□□□ 0.71
GTF3A-202ENST00000419181 RPS18P62269 152 aaKnown RBP19.51■□□□□ 0.71
GTF3A-202ENST00000419181 MGAT5Q09328 741 aa19.51■□□□□ 0.71
GTF3A-202ENST00000419181 DEFB109BQ30KR1 87 aa19.51■□□□□ 0.71
GTF3A-202ENST00000419181 ZC3H12BQ5HYM0 836 aaKnown RBP19.51■□□□□ 0.71
GTF3A-202ENST00000419181 RHBDD2Q6NTF9 364 aa19.51■□□□□ 0.71
GTF3A-202ENST00000419181 TLDC1Q6P9B6 456 aa19.51■□□□□ 0.71
GTF3A-202ENST00000419181 ZNF605Q86T29 641 aa19.51■□□□□ 0.71
GTF3A-202ENST00000419181 MCATQ8IVS2 390 aaKnown RBP19.51■□□□□ 0.71
GTF3A-202ENST00000419181 ZBED8Q8IZ13 594 aa19.51■□□□□ 0.71
GTF3A-202ENST00000419181 ZNF655Q8N720 491 aaPredicted RBP19.51■□□□□ 0.71
GTF3A-202ENST00000419181 ZNF480Q8WV37 535 aa19.51■□□□□ 0.71
GTF3A-202ENST00000419181 EEF1AKMT1Q8WVE0 214 aa19.51■□□□□ 0.71
GTF3A-202ENST00000419181 NLNQ9BYT8 704 aa19.51■□□□□ 0.71
GTF3A-202ENST00000419181 ZFATQ9P243 1243 aa19.51■□□□□ 0.71
GTF3A-202ENST00000419181 SRPK3Q9UPE1 567 aa19.51■□□□□ 0.71
GTF3A-202ENST00000419181 FARSAQ9Y285 508 aaKnown RBP19.51■□□□□ 0.71
GTF3A-202ENST00000419181 HEATR5BQ9P2D3 2071 aa19.5■□□□□ 0.71
GTF3A-202ENST00000419181 ZNF839A8K0R7 811 aa19.5■□□□□ 0.71
GTF3A-202ENST00000419181 ZBTB14O43829 449 aa19.5■□□□□ 0.71
GTF3A-202ENST00000419181 CTSVO60911 334 aa19.5■□□□□ 0.71
GTF3A-202ENST00000419181 GCGRP47871 477 aa19.5■□□□□ 0.71
GTF3A-202ENST00000419181 RGS4P49798 205 aa19.5■□□□□ 0.71
GTF3A-202ENST00000419181 POLE2P56282 527 aa19.5■□□□□ 0.71
GTF3A-202ENST00000419181 YBX1P67809 324 aaKnown RBP19.5■□□□□ 0.71
GTF3A-202ENST00000419181 PAQR3Q6TCH7 311 aa19.5■□□□□ 0.71
GTF3A-202ENST00000419181 SUSD1Q6UWL2 747 aa19.5■□□□□ 0.71
GTF3A-202ENST00000419181 UBE2R2Q712K3 238 aaPredicted RBP19.5■□□□□ 0.71
GTF3A-202ENST00000419181 SYVN1Q86TM6 617 aa19.5■□□□□ 0.71
GTF3A-202ENST00000419181 SEC14L1Q92503 715 aa19.5■□□□□ 0.71
GTF3A-202ENST00000419181 DLG3Q92796 817 aa19.5■□□□□ 0.71
GTF3A-202ENST00000419181 ZNF285Q96NJ3 590 aa19.5■□□□□ 0.71
GTF3A-202ENST00000419181 ADNPQ9H2P0 1102 aa19.5■□□□□ 0.71
GTF3A-202ENST00000419181 ENAMQ9NRM1 1142 aa19.5■□□□□ 0.71
GTF3A-202ENST00000419181 GEMIN8Q9NWZ8 242 aaKnown RBP19.5■□□□□ 0.71
GTF3A-202ENST00000419181 CDC23Q9UJX2 597 aa19.5■□□□□ 0.71
GTF3A-202ENST00000419181 UTP11Q9Y3A2 253 aaKnown RBP19.5■□□□□ 0.71
GTF3A-202ENST00000419181 PSAT1Q9Y617 370 aa19.5■□□□□ 0.71
GTF3A-202ENST00000419181 BAHCC1Q9P281 2608 aa19.5■□□□□ 0.71
GTF3A-202ENST00000419181 CDC14CA4D256 554 aa19.49■□□□□ 0.71
GTF3A-202ENST00000419181 E7ENX8 843 aa19.49■□□□□ 0.71
GTF3A-202ENST00000419181 EIF3HO15372 352 aaKnown RBP eCLIP19.49■□□□□ 0.71
GTF3A-202ENST00000419181 NRP2O60462 931 aa19.49■□□□□ 0.71
GTF3A-202ENST00000419181 TSPAN12O95859 305 aa19.49■□□□□ 0.71
GTF3A-202ENST00000419181 SYF2O95926 243 aaKnown RBP19.49■□□□□ 0.71
GTF3A-202ENST00000419181 SFTPCP11686 197 aa19.49■□□□□ 0.71
GTF3A-202ENST00000419181 FDXRP22570 491 aa19.49■□□□□ 0.71
GTF3A-202ENST00000419181 CMPK1P30085 196 aa19.49■□□□□ 0.71
GTF3A-202ENST00000419181 TAP2Q03519 686 aa19.49■□□□□ 0.71
GTF3A-202ENST00000419181 CKAP4Q07065 602 aaKnown RBP19.49■□□□□ 0.71
GTF3A-202ENST00000419181 NAA25Q14CX7 972 aa19.49■□□□□ 0.71
GTF3A-202ENST00000419181 HECTD2Q5U5R9 776 aa19.49■□□□□ 0.71
GTF3A-202ENST00000419181 LRRC56Q8IYG6 542 aaPredicted RBP19.49■□□□□ 0.71
GTF3A-202ENST00000419181 ENDOVQ8N8Q3 282 aaKnown RBP19.49■□□□□ 0.71
GTF3A-202ENST00000419181 GPATCH11Q8N954 259 aa19.49■□□□□ 0.71
GTF3A-202ENST00000419181 PROKR1Q8TCW9 393 aa19.49■□□□□ 0.71
GTF3A-202ENST00000419181 APOBEC4Q8WW27 367 aaKnown RBP19.49■□□□□ 0.71
GTF3A-202ENST00000419181 GBP5Q96PP8 586 aa19.49■□□□□ 0.71
GTF3A-202ENST00000419181 ACAT2Q9BWD1 397 aa19.49■□□□□ 0.71
GTF3A-202ENST00000419181 RAB17Q9H0T7 212 aa19.49■□□□□ 0.71
GTF3A-202ENST00000419181 SLC6A20Q9NP91 592 aa19.49■□□□□ 0.71
GTF3A-202ENST00000419181 IRAK4Q9NWZ3 460 aa19.49■□□□□ 0.71
GTF3A-202ENST00000419181 DHCR7Q9UBM7 475 aaKnown RBP19.49■□□□□ 0.71
GTF3A-202ENST00000419181 POLHQ9Y253 713 aa19.49■□□□□ 0.71
GTF3A-202ENST00000419181 KCNMB2Q9Y691 235 aa19.49■□□□□ 0.71
GTF3A-202ENST00000419181 OR2A25A4D2G3 310 aa19.48■□□□□ 0.71
GTF3A-202ENST00000419181 C8GP07360 202 aa19.48■□□□□ 0.71
GTF3A-202ENST00000419181 AGXTP21549 392 aa19.48■□□□□ 0.71
GTF3A-202ENST00000419181 IMPA1P29218 277 aa19.48■□□□□ 0.71
GTF3A-202ENST00000419181 RPA3P35244 121 aaPredicted RBP19.48■□□□□ 0.71
GTF3A-202ENST00000419181 SP140Q13342 867 aa19.48■□□□□ 0.71
GTF3A-202ENST00000419181 IL10RAQ13651 578 aa19.48■□□□□ 0.71
GTF3A-202ENST00000419181 NCF4Q15080 339 aa19.48■□□□□ 0.71
GTF3A-202ENST00000419181 UGT8Q16880 541 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms