RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 KLF10Q13118 480 aa20.12■□□□□ 0.81
CASC3-203ENST00000418132 CPSF6Q16630 551 aaKnown RBP eCLIP20.12■□□□□ 0.81
CASC3-203ENST00000418132 OGFOD2Q6N063 350 aa20.12■□□□□ 0.81
CASC3-203ENST00000418132 SLC30A9Q6PML9 568 aa20.12■□□□□ 0.81
CASC3-203ENST00000418132 PARGQ86W56 976 aa20.12■□□□□ 0.81
CASC3-203ENST00000418132 LMNTD1Q8N9Z9 388 aa20.12■□□□□ 0.81
CASC3-203ENST00000418132 OR2T11Q8NH01 316 aa20.12■□□□□ 0.81
CASC3-203ENST00000418132 TBC1D10AQ9BXI6 508 aa20.12■□□□□ 0.81
CASC3-203ENST00000418132 G3BP2Q9UN86 482 aaKnown RBP20.12■□□□□ 0.81
CASC3-203ENST00000418132 COPG1Q9Y678 874 aaKnown RBP20.12■□□□□ 0.81
CASC3-203ENST00000418132 TECTAO75443 2155 aa20.11■□□□□ 0.81
CASC3-203ENST00000418132 GON4LQ3T8J9 2241 aa20.11■□□□□ 0.81
CASC3-203ENST00000418132 ABCA7Q8IZY2 2146 aa20.11■□□□□ 0.81
CASC3-203ENST00000418132 ZNF839A8K0R7 811 aa20.11■□□□□ 0.81
CASC3-203ENST00000418132 A8MUI8 341 aa20.11■□□□□ 0.81
CASC3-203ENST00000418132 CLGNO14967 610 aa20.11■□□□□ 0.81
CASC3-203ENST00000418132 MAP3K13O43283 966 aa20.11■□□□□ 0.81
CASC3-203ENST00000418132 HNRNPCL1O60812 293 aaKnown RBP20.11■□□□□ 0.81
CASC3-203ENST00000418132 KRT6AP02538 564 aa20.11■□□□□ 0.81
CASC3-203ENST00000418132 KRT6BP04259 564 aa20.11■□□□□ 0.81
CASC3-203ENST00000418132 LBPP18428 481 aa20.11■□□□□ 0.81
CASC3-203ENST00000418132 CALB2P22676 271 aa20.11■□□□□ 0.81
CASC3-203ENST00000418132 MAOBP27338 520 aa20.11■□□□□ 0.81
CASC3-203ENST00000418132 PTPN4P29074 926 aa20.11■□□□□ 0.81
CASC3-203ENST00000418132 KRT6CP48668 564 aa20.11■□□□□ 0.81
CASC3-203ENST00000418132 DOC2AQ14183 400 aa20.11■□□□□ 0.81
CASC3-203ENST00000418132 XKR6Q5GH73 641 aa20.11■□□□□ 0.81
CASC3-203ENST00000418132 SUSD1Q6UWL2 747 aa20.11■□□□□ 0.81
CASC3-203ENST00000418132 TRIM46Q7Z4K8 759 aa20.11■□□□□ 0.81
CASC3-203ENST00000418132 C1orf216Q8TAB5 229 aa20.11■□□□□ 0.81
CASC3-203ENST00000418132 NEIL2Q969S2 332 aa20.11■□□□□ 0.81
CASC3-203ENST00000418132 MARK4Q96L34 752 aa20.11■□□□□ 0.81
CASC3-203ENST00000418132 TCEAL2Q9H3H9 227 aaPredicted RBP20.11■□□□□ 0.81
CASC3-203ENST00000418132 PRMT8Q9NR22 394 aaPredicted RBP20.11■□□□□ 0.81
CASC3-203ENST00000418132 GIMAP2Q9UG22 337 aa20.11■□□□□ 0.81
CASC3-203ENST00000418132 SNX6Q9UNH7 406 aa20.11■□□□□ 0.81
CASC3-203ENST00000418132 CCL27Q9Y4X3 112 aa20.11■□□□□ 0.81
CASC3-203ENST00000418132 CD22P20273 847 aa20.1■□□□□ 0.81
CASC3-203ENST00000418132 TCEA2Q15560 299 aa20.1■□□□□ 0.81
CASC3-203ENST00000418132 SLCO4C1Q6ZQN7 724 aa20.1■□□□□ 0.81
CASC3-203ENST00000418132 RAB42Q8N4Z0 105 aa20.1■□□□□ 0.81
CASC3-203ENST00000418132 DUSP15Q9H1R2 295 aaPredicted RBP20.1■□□□□ 0.81
CASC3-203ENST00000418132 FARSBQ9NSD9 589 aaKnown RBP20.1■□□□□ 0.81
CASC3-203ENST00000418132 TAGLN3Q9UI15 199 aa20.1■□□□□ 0.81
CASC3-203ENST00000418132 FANCMQ8IYD8 2048 aa20.1■□□□□ 0.81
CASC3-203ENST00000418132 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.1■□□□□ 0.81
CASC3-203ENST00000418132 ALDOCP09972 364 aaKnown RBP20.1■□□□□ 0.81
CASC3-203ENST00000418132 ESRRAP11474 423 aaPredicted RBP20.1■□□□□ 0.81
CASC3-203ENST00000418132 F3P13726 295 aa20.1■□□□□ 0.81
CASC3-203ENST00000418132 HNF4AP41235 474 aa20.1■□□□□ 0.81
CASC3-203ENST00000418132 BLKP51451 505 aa20.1■□□□□ 0.81
CASC3-203ENST00000418132 KRT33BQ14525 404 aa20.1■□□□□ 0.81
CASC3-203ENST00000418132 ZRSR2Q15696 482 aaKnown RBP20.1■□□□□ 0.81
CASC3-203ENST00000418132 GRHL2Q6ISB3 625 aa20.1■□□□□ 0.81
CASC3-203ENST00000418132 TSSK4Q6SA08 328 aa20.1■□□□□ 0.81
CASC3-203ENST00000418132 LCTLQ6UWM7 567 aa20.1■□□□□ 0.81
CASC3-203ENST00000418132 TMEFF1Q8IYR6 380 aa20.1■□□□□ 0.81
CASC3-203ENST00000418132 HMGCLL1Q8TB92 370 aa20.1■□□□□ 0.81
CASC3-203ENST00000418132 DNASE2BQ8WZ79 361 aa20.1■□□□□ 0.81
CASC3-203ENST00000418132 WDR34Q96EX3 536 aa20.1■□□□□ 0.81
CASC3-203ENST00000418132 HBEGFQ99075 208 aa20.1■□□□□ 0.81
CASC3-203ENST00000418132 NRTNQ99748 197 aa20.1■□□□□ 0.81
CASC3-203ENST00000418132 RAB11FIP5Q9BXF6 653 aa20.1■□□□□ 0.81
CASC3-203ENST00000418132 GSDMCQ9BYG8 508 aa20.1■□□□□ 0.81
CASC3-203ENST00000418132 CAAP1Q9H8G2 361 aa20.1■□□□□ 0.81
CASC3-203ENST00000418132 TM9SF3Q9HD45 589 aa20.1■□□□□ 0.81
CASC3-203ENST00000418132 ZNF490Q9ULM2 529 aaPredicted RBP20.1■□□□□ 0.81
CASC3-203ENST00000418132 DYRK1BQ9Y463 629 aa20.1■□□□□ 0.81
CASC3-203ENST00000418132 COLEC10Q9Y6Z7 277 aa20.1■□□□□ 0.81
CASC3-203ENST00000418132 NCOR1O75376 2440 aa20.09■□□□□ 0.81
CASC3-203ENST00000418132 PEX11AO75192 247 aa20.09■□□□□ 0.81
CASC3-203ENST00000418132 TDGF1P13385 188 aa20.09■□□□□ 0.81
CASC3-203ENST00000418132 NDUFS1P28331 727 aa20.09■□□□□ 0.81
CASC3-203ENST00000418132 RAB28P51157 221 aa20.09■□□□□ 0.81
CASC3-203ENST00000418132 ATP4BP51164 291 aa20.09■□□□□ 0.81
CASC3-203ENST00000418132 TSTA3Q13630 321 aaPredicted RBP20.09■□□□□ 0.81
CASC3-203ENST00000418132 NAA25Q14CX7 972 aa20.09■□□□□ 0.81
CASC3-203ENST00000418132 ZNF542PQ5EBM4 170 aa20.09■□□□□ 0.81
CASC3-203ENST00000418132 PRAMEF14Q5SWL7 426 aa20.09■□□□□ 0.81
CASC3-203ENST00000418132 PRAMEF13Q5VWM6 474 aa20.09■□□□□ 0.81
CASC3-203ENST00000418132 LONP2Q86WA8 852 aa20.09■□□□□ 0.81
CASC3-203ENST00000418132 PHACTR4Q8IZ21 702 aa20.09■□□□□ 0.81
CASC3-203ENST00000418132 SFRP1Q8N474 314 aa20.09■□□□□ 0.81
CASC3-203ENST00000418132 SMPDL3AQ92484 453 aa20.09■□□□□ 0.81
CASC3-203ENST00000418132 HAUS8Q9BT25 410 aa20.09■□□□□ 0.81
CASC3-203ENST00000418132 EHD1Q9H4M9 534 aa20.09■□□□□ 0.81
CASC3-203ENST00000418132 BDP1A6H8Y1 2624 aa20.09■□□□□ 0.81
CASC3-203ENST00000418132 SLC28A1O00337 649 aa20.08■□□□□ 0.81
CASC3-203ENST00000418132 PIK3R1P27986 724 aa20.08■□□□□ 0.81
CASC3-203ENST00000418132 PRDX6P30041 224 aa20.08■□□□□ 0.81
CASC3-203ENST00000418132 PKLRP30613 574 aa20.08■□□□□ 0.81
CASC3-203ENST00000418132 IRX1P78414 480 aaPredicted RBP20.08■□□□□ 0.81
CASC3-203ENST00000418132 ZNF33BQ06732 778 aa20.08■□□□□ 0.81
CASC3-203ENST00000418132 SQLEQ14534 574 aa20.08■□□□□ 0.81
CASC3-203ENST00000418132 C6orf136Q5SQH8 315 aa20.08■□□□□ 0.81
CASC3-203ENST00000418132 SPATA19Q7Z5L4 167 aa20.08■□□□□ 0.81
CASC3-203ENST00000418132 LINC01555Q8NAE3 123 aa20.08■□□□□ 0.81
CASC3-203ENST00000418132 OR52E1Q8NGJ3 308 aa20.08■□□□□ 0.81
CASC3-203ENST00000418132 MIR1-1HGQ9H1L0 117 aa20.08■□□□□ 0.81
CASC3-203ENST00000418132 ELOVL6Q9H5J4 265 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms