RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 DNAJB8Q8NHS0 232 aa13.14□□□□□ -0.31
SSB-204ENST00000417292 CCDC110Q8TBZ0 833 aa13.14□□□□□ -0.31
SSB-204ENST00000417292 VPS50Q96JG6 964 aa13.14□□□□□ -0.31
SSB-204ENST00000417292 CRB3Q9BUF7 120 aa13.14□□□□□ -0.31
SSB-204ENST00000417292 ENKD1Q9H0I2 346 aa13.14□□□□□ -0.31
SSB-204ENST00000417292 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.14□□□□□ -0.31
SSB-204ENST00000417292 ASF1AQ9Y294 204 aa13.14□□□□□ -0.31
SSB-204ENST00000417292 MAU2Q9Y6X3 613 aa13.14□□□□□ -0.31
SSB-204ENST00000417292 IGLV3-16A0A075B6K0 115 aa13.13□□□□□ -0.31
SSB-204ENST00000417292 A0A1B0GTL3 188 aa13.13□□□□□ -0.31
SSB-204ENST00000417292 C2orf81A6NN90 581 aa13.13□□□□□ -0.31
SSB-204ENST00000417292 ISM1B1AKI9 464 aa13.13□□□□□ -0.31
SSB-204ENST00000417292 CFAP99D6REC4 459 aa13.13□□□□□ -0.31
SSB-204ENST00000417292 CCL22O00626 93 aa13.13□□□□□ -0.31
SSB-204ENST00000417292 MED26O95402 600 aa13.13□□□□□ -0.31
SSB-204ENST00000417292 WDPCPO95876 746 aa13.13□□□□□ -0.31
SSB-204ENST00000417292 PTMAP06454 111 aaKnown RBP13.13□□□□□ -0.31
SSB-204ENST00000417292 CELA2AP08217 269 aa13.13□□□□□ -0.31
SSB-204ENST00000417292 COX6A1P12074 109 aa13.13□□□□□ -0.31
SSB-204ENST00000417292 ACADLP28330 430 aa13.13□□□□□ -0.31
SSB-204ENST00000417292 GRIA3P42263 894 aa13.13□□□□□ -0.31
SSB-204ENST00000417292 CASP6P55212 293 aa13.13□□□□□ -0.31
SSB-204ENST00000417292 CSNK1G2P78368 415 aa13.13□□□□□ -0.31
SSB-204ENST00000417292 MPP3Q13368 585 aa13.13□□□□□ -0.31
SSB-204ENST00000417292 OLIG2Q13516 323 aa13.13□□□□□ -0.31
SSB-204ENST00000417292 FAAH2Q6GMR7 532 aa13.13□□□□□ -0.31
SSB-204ENST00000417292 DARS2Q6PI48 645 aaKnown RBP13.13□□□□□ -0.31
SSB-204ENST00000417292 PRSS58Q8IYP2 241 aa13.13□□□□□ -0.31
SSB-204ENST00000417292 RNF10Q8N5U6 811 aaKnown RBP13.13□□□□□ -0.31
SSB-204ENST00000417292 DENND1AQ8TEH3 1009 aa13.13□□□□□ -0.31
SSB-204ENST00000417292 ULK4Q96C45 1275 aa13.13□□□□□ -0.31
SSB-204ENST00000417292 HES6Q96HZ4 224 aa13.13□□□□□ -0.31
SSB-204ENST00000417292 GORASP1Q9BQQ3 440 aa13.13□□□□□ -0.31
SSB-204ENST00000417292 TMUB1Q9BVT8 246 aa13.13□□□□□ -0.31
SSB-204ENST00000417292 FSD1LQ9BXM9 530 aa13.13□□□□□ -0.31
SSB-204ENST00000417292 TSGA10Q9BZW7 698 aa13.13□□□□□ -0.31
SSB-204ENST00000417292 R3HDM2Q9Y2K5 976 aaKnown RBP13.13□□□□□ -0.31
SSB-204ENST00000417292 TDRKHQ9Y2W6 561 aaKnown RBP13.13□□□□□ -0.31
SSB-204ENST00000417292 CPAMD8Q8IZJ3 1885 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 ACANP16112 2415 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 NSG1A0A0A6YYJ2 146 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 C5orf60A6NFR6 353 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 MIF4GDA9UHW6 222 aaKnown RBP13.12□□□□□ -0.31
SSB-204ENST00000417292 HACD1B0YJ81 288 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 MAP2K7O14733 419 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 TJP3O95049 919 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 CCDC175P0C221 793 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 PRSS56P0CW18 603 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 RBP3P10745 1247 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 PTPN7P35236 360 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 CETN2P41208 172 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 NSG1P42857 185 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 CARSP49589 748 aaKnown RBP13.12□□□□□ -0.31
SSB-204ENST00000417292 ART1P52961 327 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 MSLNQ13421 630 aaPredicted RBP13.12□□□□□ -0.31
SSB-204ENST00000417292 KIR2DS3Q14952 304 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 ZNF449Q6P9G9 518 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 NDUFAF7Q7L592 441 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 NLRP9Q7RTR0 991 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 SNX20Q7Z614 316 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 TBC1D21Q8IYX1 336 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 LMNTD1Q8N9Z9 388 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 OR5K2Q8NHB8 316 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 STT3BQ8TCJ2 826 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 HEXDCQ8WVB3 486 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 ZNF285Q96NJ3 590 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 TREX2Q9BQ50 279 aaPredicted RBP13.12□□□□□ -0.31
SSB-204ENST00000417292 FICDQ9BVA6 458 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 VPS37BQ9H9H4 285 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 ENAMQ9NRM1 1142 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 ZDHHC3Q9NYG2 299 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 POLG2Q9UHN1 485 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 C3orf18Q9UK00 162 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 EFR3BQ9Y2G0 817 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 ZNF835Q9Y2P0 537 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 MEMO1Q9Y316 297 aa13.12□□□□□ -0.31
SSB-204ENST00000417292 MRPS2Q9Y399 296 aaKnown RBP13.12□□□□□ -0.31
SSB-204ENST00000417292 FITM1A5D6W6 292 aa13.11□□□□□ -0.31
SSB-204ENST00000417292 PRAMEF2O60811 474 aa13.11□□□□□ -0.31
SSB-204ENST00000417292 SERPINA7P05543 415 aa13.11□□□□□ -0.31
SSB-204ENST00000417292 ZGLP1P0C6A0 271 aa13.11□□□□□ -0.31
SSB-204ENST00000417292 ITGALP20701 1170 aa13.11□□□□□ -0.31
SSB-204ENST00000417292 FDXRP22570 491 aa13.11□□□□□ -0.31
SSB-204ENST00000417292 ZNF140P52738 457 aaPredicted RBP13.11□□□□□ -0.31
SSB-204ENST00000417292 GRM7Q14831 915 aa13.11□□□□□ -0.31
SSB-204ENST00000417292 YOD1Q5VVQ6 348 aaPredicted RBP13.11□□□□□ -0.31
SSB-204ENST00000417292 HIBCHQ6NVY1 386 aaPredicted RBP13.11□□□□□ -0.31
SSB-204ENST00000417292 RANBP10Q6VN20 620 aa13.11□□□□□ -0.31
SSB-204ENST00000417292 NAPRTQ6XQN6 538 aa13.11□□□□□ -0.31
SSB-204ENST00000417292 MEX3BQ6ZN04 569 aaKnown RBP13.11□□□□□ -0.31
SSB-204ENST00000417292 ARHGEF18Q6ZSZ5 1173 aa13.11□□□□□ -0.31
SSB-204ENST00000417292 LAPTM4BQ86VI4 370 aa13.11□□□□□ -0.31
SSB-204ENST00000417292 CDKL3Q8IVW4 592 aaPredicted RBP13.11□□□□□ -0.31
SSB-204ENST00000417292 TAB3Q8N5C8 712 aaPredicted RBP13.11□□□□□ -0.31
SSB-204ENST00000417292 LINC01555Q8NAE3 123 aa13.11□□□□□ -0.31
SSB-204ENST00000417292 APOL2Q9BQE5 337 aa13.11□□□□□ -0.31
SSB-204ENST00000417292 TMEM121Q9BTD3 319 aa13.11□□□□□ -0.31
SSB-204ENST00000417292 RSPH14Q9UHP6 348 aa13.11□□□□□ -0.31
SSB-204ENST00000417292 PPP2R2CQ9Y2T4 447 aa13.11□□□□□ -0.31
SSB-204ENST00000417292 TRBV5-4A0A0C4DH59 114 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms