RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 KPNA1P52294 538 aaPredicted RBP9.6□□□□□ -0.87
SS18-203ENST00000415083 UGT8Q16880 541 aa9.6□□□□□ -0.87
SS18-203ENST00000415083 ZC3H12BQ5HYM0 836 aaKnown RBP9.6□□□□□ -0.87
SS18-203ENST00000415083 HECTD3Q5T447 861 aa9.6□□□□□ -0.87
SS18-203ENST00000415083 PTRHD1Q6GMV3 140 aaKnown RBP9.6□□□□□ -0.87
SS18-203ENST00000415083 OR4F3Q6IEY1 312 aa9.6□□□□□ -0.87
SS18-203ENST00000415083 BEND7Q8N7W2 519 aaPredicted RBP9.6□□□□□ -0.87
SS18-203ENST00000415083 ARL10Q8N8L6 244 aa9.6□□□□□ -0.87
SS18-203ENST00000415083 DBF4BQ8NFT6 615 aa9.6□□□□□ -0.87
SS18-203ENST00000415083 OR7A2PQ8NGA2 310 aa9.6□□□□□ -0.87
SS18-203ENST00000415083 MCOLN3Q8TDD5 553 aa9.6□□□□□ -0.87
SS18-203ENST00000415083 FOXJ1Q92949 421 aa9.6□□□□□ -0.87
SS18-203ENST00000415083 ZNF347Q96SE7 839 aa9.6□□□□□ -0.87
SS18-203ENST00000415083 FAM126AQ9BYI3 521 aaPredicted RBP9.6□□□□□ -0.87
SS18-203ENST00000415083 SLIRPQ9GZT3 109 aaKnown RBP9.6□□□□□ -0.87
SS18-203ENST00000415083 NDRG4Q9ULP0 352 aaKnown RBP9.6□□□□□ -0.87
SS18-203ENST00000415083 hCG_2039718K7EN88 272 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 EFNA1P20827 205 aaPredicted RBP9.59□□□□□ -0.87
SS18-203ENST00000415083 OR1D2P34982 312 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 CTSOP43234 321 aaPredicted RBP9.59□□□□□ -0.87
SS18-203ENST00000415083 SLC6A12P48065 614 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 RPS14P62263 151 aaKnown RBP9.59□□□□□ -0.87
SS18-203ENST00000415083 SMU1Q2TAY7 513 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 MFSD14CQ5VZR4 134 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 NIPAL1Q6NVV3 410 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 DOK6Q6PKX4 331 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 FAM124AQ86V42 546 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 ZDHHC21Q8IVQ6 265 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 SLC43A3Q8NBI5 491 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 PIK3C3Q8NEB9 887 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 PDZD8Q8NEN9 1154 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 PLD4Q96BZ4 506 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 C11orf24Q96F05 449 aaPredicted RBP9.59□□□□□ -0.87
SS18-203ENST00000415083 VMP1Q96GC9 406 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 FCRL1Q96LA6 429 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 ZNF334Q9HCZ1 680 aaPredicted RBP9.59□□□□□ -0.87
SS18-203ENST00000415083 PALMDQ9NP74 551 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 LATS2Q9NRM7 1088 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 MTRRQ9UBK8 725 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 PLXNA2O75051 1894 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 SLC28A1O00337 649 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 GSTA4O15217 222 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 SGTAO43765 313 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 PCDHGA12O60330 932 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 AOAHP28039 575 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 KRT20P35900 424 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 VAC14Q08AM6 782 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 INO80DQ53TQ3 878 aaPredicted RBP9.59□□□□□ -0.87
SS18-203ENST00000415083 PERM1Q5SV97 790 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 Q6ZNB5 142 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 ANKS3Q6ZW76 656 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 CLECL1Q8IZS7 167 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 SLC35B4Q969S0 331 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 TBC1D20Q96BZ9 403 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 SAMD11Q96NU1 681 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 FAM193BQ96PV7 902 aaPredicted RBP9.59□□□□□ -0.87
SS18-203ENST00000415083 TTPALQ9BTX7 342 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 EBPLQ9BY08 206 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 CLPBQ9H078 707 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 ZFYVE1Q9HBF4 777 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 RDH14Q9HBH5 336 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 SACM1LQ9NTJ5 587 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 WWOXQ9NZC7 414 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 EIF3LQ9Y262 564 aaKnown RBP9.59□□□□□ -0.87
SS18-203ENST00000415083 COQ9O75208 318 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 WDR47O94967 919 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 PARNO95453 639 aaKnown RBP9.59□□□□□ -0.87
SS18-203ENST00000415083 ETHE1O95571 254 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 LCKP06239 509 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 CCDC159P0C7I6 412 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 AKT1P31749 480 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 LIMK1P53667 647 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 CRISP3P54108 245 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 RHOAP61586 193 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 PTSQ03393 145 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 SFSWAPQ12872 951 aaKnown RBP9.59□□□□□ -0.87
SS18-203ENST00000415083 MTAPQ13126 283 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 NPTX1Q15818 432 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 SYT6Q5T7P8 510 aaPredicted RBP9.59□□□□□ -0.87
SS18-203ENST00000415083 CRTC1Q6UUV9 634 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 SERPINA13PQ6UXR4 307 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 GALNT13Q8IUC8 556 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 STK40Q8N2I9 435 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 AADATQ8N5Z0 425 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 GLB1L3Q8NCI6 653 aaPredicted RBP9.59□□□□□ -0.87
SS18-203ENST00000415083 C7orf34Q96L11 122 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 EGFL8Q99944 293 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 P2RY13Q9BPV8 354 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 BEGAINQ9BUH8 593 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 RSPO3Q9BXY4 272 aaPredicted RBP9.59□□□□□ -0.87
SS18-203ENST00000415083 RETREG1Q9H6L5 497 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 IL1RAPQ9NPH3 570 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 POLE4Q9NR33 117 aa9.59□□□□□ -0.87
SS18-203ENST00000415083 EXO1Q9UQ84 846 aaKnown RBP9.59□□□□□ -0.87
SS18-203ENST00000415083 M0R082 166 aa9.58□□□□□ -0.88
SS18-203ENST00000415083 WNT9AO14904 365 aa9.58□□□□□ -0.88
SS18-203ENST00000415083 SLC10A3P09131 477 aa9.58□□□□□ -0.88
SS18-203ENST00000415083 AMD1P17707 334 aa9.58□□□□□ -0.88
SS18-203ENST00000415083 PRPH2P23942 346 aa9.58□□□□□ -0.88
SS18-203ENST00000415083 CREMQ03060 361 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms