RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 CIB2O75838 187 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 ANXA5P08758 320 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 ETS2P15036 469 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 MAP4P27816 1152 aaKnown RBP15.07■□□□□ 0
SHMT2-202ENST00000414700 CDC16Q13042 620 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 ARL13AQ5H913 290 aaPredicted RBP15.07■□□□□ 0
SHMT2-202ENST00000414700 ATG16L1Q676U5 607 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 AGR3Q8TD06 166 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 HGH1Q9BTY7 390 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 EPB41L1Q9H4G0 881 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 ZBTB26Q9HCK0 441 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 TNFRSF12AQ9NP84 129 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 NDUFA13Q9P0J0 144 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 PCDHGA4Q9Y5G9 962 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 STX16-NPEPL1H3BU86 382 aa15.06■□□□□ 0
SHMT2-202ENST00000414700 E2F3O00716 465 aa15.06■□□□□ 0
SHMT2-202ENST00000414700 UBFD1O14562 309 aaKnown RBP15.06■□□□□ 0
SHMT2-202ENST00000414700 STX16O14662 325 aa15.06■□□□□ 0
SHMT2-202ENST00000414700 RPS17P08708 135 aaKnown RBP15.06■□□□□ 0
SHMT2-202ENST00000414700 CTSEP14091 401 aa15.06■□□□□ 0
SHMT2-202ENST00000414700 GRK2P25098 689 aa15.06■□□□□ 0
SHMT2-202ENST00000414700 SERPINB3P29508 390 aa15.06■□□□□ 0
SHMT2-202ENST00000414700 C21orf59P57076 290 aa15.06■□□□□ 0
SHMT2-202ENST00000414700 ABCE1P61221 599 aaKnown RBP15.06■□□□□ 0
SHMT2-202ENST00000414700 SIM2Q14190 667 aaPredicted RBP15.06■□□□□ 0
SHMT2-202ENST00000414700 KIF19Q2TAC6 998 aa15.06■□□□□ 0
SHMT2-202ENST00000414700 CFAP157Q5JU67 520 aa15.06■□□□□ 0
SHMT2-202ENST00000414700 UNC5DQ6UXZ4 953 aa15.06■□□□□ 0
SHMT2-202ENST00000414700 PRR23BQ6ZRT6 265 aa15.06■□□□□ 0
SHMT2-202ENST00000414700 C11orf74Q86VG3 221 aa15.06■□□□□ 0
SHMT2-202ENST00000414700 TRIM42Q8IWZ5 723 aa15.06■□□□□ 0
SHMT2-202ENST00000414700 OR5K2Q8NHB8 316 aa15.06■□□□□ 0
SHMT2-202ENST00000414700 RAB3IL1Q8TBN0 382 aa15.06■□□□□ 0
SHMT2-202ENST00000414700 IL17FQ96PD4 163 aa15.06■□□□□ 0
SHMT2-202ENST00000414700 TMEM120AQ9BXJ8 343 aa15.06■□□□□ 0
SHMT2-202ENST00000414700 TRIM54Q9BYV2 358 aa15.06■□□□□ 0
SHMT2-202ENST00000414700 DRC3Q9H069 523 aa15.06■□□□□ 0
SHMT2-202ENST00000414700 THAP1Q9NVV9 213 aa15.06■□□□□ 0
SHMT2-202ENST00000414700 WWOXQ9NZC7 414 aa15.06■□□□□ 0
SHMT2-202ENST00000414700 TAAR2Q9P1P5 351 aa15.06■□□□□ 0
SHMT2-202ENST00000414700 STOX2Q9P2F5 926 aaPredicted RBP15.06■□□□□ 0
SHMT2-202ENST00000414700 ZNF624Q9P2J8 865 aaPredicted RBP15.06■□□□□ 0
SHMT2-202ENST00000414700 PCTPQ9UKL6 214 aa15.06■□□□□ 0
SHMT2-202ENST00000414700 BLOC1S6Q9UL45 172 aa15.06■□□□□ 0
SHMT2-202ENST00000414700 TDRKHQ9Y2W6 561 aaKnown RBP15.06■□□□□ 0
SHMT2-202ENST00000414700 SNX11Q9Y5W9 270 aa15.06■□□□□ 0
SHMT2-202ENST00000414700 A0A1B0GTW7 788 aa15.05■□□□□ 0
SHMT2-202ENST00000414700 TGDSO95455 350 aa15.05■□□□□ 0
SHMT2-202ENST00000414700 S100BP04271 92 aaPredicted RBP15.05■□□□□ 0
SHMT2-202ENST00000414700 IMPA1P29218 277 aa15.05■□□□□ 0
SHMT2-202ENST00000414700 BLKP51451 505 aa15.05■□□□□ 0
SHMT2-202ENST00000414700 AP1S2P56377 157 aa15.05■□□□□ 0
SHMT2-202ENST00000414700 CDKL1Q00532 357 aa15.05■□□□□ 0
SHMT2-202ENST00000414700 RPE65Q16518 533 aa15.05■□□□□ 0
SHMT2-202ENST00000414700 SULT1C3Q6IMI6 304 aa15.05■□□□□ 0
SHMT2-202ENST00000414700 ABRAXAS1Q6UWZ7 409 aa15.05■□□□□ 0
SHMT2-202ENST00000414700 FRMD7Q6ZUT3 714 aa15.05■□□□□ 0
SHMT2-202ENST00000414700 TAF8Q7Z7C8 310 aa15.05■□□□□ 0
SHMT2-202ENST00000414700 ZNF480Q8WV37 535 aa15.05■□□□□ 0
SHMT2-202ENST00000414700 SREK1Q8WXA9 508 aaKnown RBP15.05■□□□□ 0
SHMT2-202ENST00000414700 FERD3LQ96RJ6 166 aa15.05■□□□□ 0
SHMT2-202ENST00000414700 SEMA4BQ9NPR2 832 aaPredicted RBP15.05■□□□□ 0
SHMT2-202ENST00000414700 MARCOQ9UEW3 520 aaPredicted RBP15.05■□□□□ 0
SHMT2-202ENST00000414700 PCOLCE2Q9UKZ9 415 aa15.05■□□□□ 0
SHMT2-202ENST00000414700 SNRNP200O75643 2136 aaKnown RBP15.05■□□□□ -0
SHMT2-202ENST00000414700 PATE3B3GLJ2 98 aa15.05■□□□□ -0
SHMT2-202ENST00000414700 KITP10721 976 aa15.05■□□□□ -0
SHMT2-202ENST00000414700 F3P13726 295 aa15.05■□□□□ -0
SHMT2-202ENST00000414700 CNR2P34972 360 aa15.05■□□□□ -0
SHMT2-202ENST00000414700 INHBCP55103 352 aa15.05■□□□□ -0
SHMT2-202ENST00000414700 PTCHD3Q3KNS1 767 aa15.05■□□□□ -0
SHMT2-202ENST00000414700 RIPOR1Q6ZS17 1223 aa15.05■□□□□ -0
SHMT2-202ENST00000414700 RAB44Q7Z6P3 723 aaPredicted RBP15.05■□□□□ -0
SHMT2-202ENST00000414700 DCUN1D3Q8IWE4 304 aa15.05■□□□□ -0
SHMT2-202ENST00000414700 ZNF781Q8N8C0 355 aa15.05■□□□□ -0
SHMT2-202ENST00000414700 DCBLD1Q8N8Z6 715 aa15.05■□□□□ -0
SHMT2-202ENST00000414700 FBXO15Q8NCQ5 510 aaPredicted RBP15.05■□□□□ -0
SHMT2-202ENST00000414700 PRR11Q96HE9 360 aaPredicted RBP15.05■□□□□ -0
SHMT2-202ENST00000414700 MENTQ9BUN1 341 aa15.05■□□□□ -0
SHMT2-202ENST00000414700 C1QTNF3Q9BXJ4 246 aa15.05■□□□□ -0
SHMT2-202ENST00000414700 GSDMCQ9BYG8 508 aa15.05■□□□□ -0
SHMT2-202ENST00000414700 UCKL1Q9NWZ5 548 aa15.05■□□□□ -0
SHMT2-202ENST00000414700 PTTG2Q9NZH5 202 aa15.05■□□□□ -0
SHMT2-202ENST00000414700 CCNT2O60583 730 aaKnown RBP15.04■□□□□ -0
SHMT2-202ENST00000414700 PFDN1O60925 122 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 HSPA4LO95757 839 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 GNSP15586 552 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 MPSTP25325 297 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 PRDX3P30048 256 aaKnown RBP15.04■□□□□ -0
SHMT2-202ENST00000414700 CTSKP43235 329 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 MAPK9P45984 424 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 FASTKQ14296 549 aaKnown RBP15.04■□□□□ -0
SHMT2-202ENST00000414700 PCBP2Q15366 365 aaKnown RBP eCLIP15.04■□□□□ -0
SHMT2-202ENST00000414700 ANKS6Q68DC2 871 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 AGTRAPQ6RW13 159 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 SYT12Q8IV01 421 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 NAGSQ8N159 534 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 C2orf73Q8N5S3 287 aaPredicted RBP15.04■□□□□ -0
SHMT2-202ENST00000414700 OR9A1PQ8NGU1 263 aa15.04■□□□□ -0
SHMT2-202ENST00000414700 LMX1AQ8TE12 382 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms