RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, human

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG4C-204	ENST00000414558	SMIM18	P0DKX4	95 aa		4.37	□□□□□ -1.71
ATG4C-204	ENST00000414558	HAPLN1	P10915	354 aa	Predicted RBP	4.37	□□□□□ -1.71
ATG4C-204	ENST00000414558	DARS	P14868	501 aa	Known RBP	4.37	□□□□□ -1.71
ATG4C-204	ENST00000414558	DNASE1	P24855	282 aa		4.37	□□□□□ -1.71
ATG4C-204	ENST00000414558	HLA-F	P30511	346 aa		4.37	□□□□□ -1.71
ATG4C-204	ENST00000414558	PTGER3	P43115	390 aa		4.37	□□□□□ -1.71
ATG4C-204	ENST00000414558	TSFM	P43897	325 aa	Known RBP	4.37	□□□□□ -1.71
ATG4C-204	ENST00000414558	ZNF75D	P51815	510 aa		4.37	□□□□□ -1.71
ATG4C-204	ENST00000414558	TMEM50B	P56557	158 aa		4.37	□□□□□ -1.71
ATG4C-204	ENST00000414558	GCNT1	Q02742	428 aa		4.37	□□□□□ -1.71
ATG4C-204	ENST00000414558	HSPB3	Q12988	150 aa		4.37	□□□□□ -1.71
ATG4C-204	ENST00000414558	CALCOCO2	Q13137	446 aa		4.37	□□□□□ -1.71
ATG4C-204	ENST00000414558	BAAT	Q14032	418 aa	Predicted RBP	4.37	□□□□□ -1.71
ATG4C-204	ENST00000414558	MTHFSD	Q2M296	383 aa	Known RBP	4.37	□□□□□ -1.71
ATG4C-204	ENST00000414558	RILPL1	Q5EBL4	403 aa		4.37	□□□□□ -1.71
ATG4C-204	ENST00000414558	ZNF343	Q6P1L6	599 aa		4.37	□□□□□ -1.71
ATG4C-204	ENST00000414558	GPRIN3	Q6ZVF9	776 aa		4.37	□□□□□ -1.71
ATG4C-204	ENST00000414558	ARHGAP22	Q7Z5H3	698 aa		4.37	□□□□□ -1.71
ATG4C-204	ENST00000414558	NUP37	Q8NFH4	326 aa		4.37	□□□□□ -1.71
ATG4C-204	ENST00000414558	SYN2	Q92777	582 aa	Predicted RBP	4.37	□□□□□ -1.71
ATG4C-204	ENST00000414558	SLC22A18	Q96BI1	424 aa		4.37	□□□□□ -1.71
ATG4C-204	ENST00000414558	RSRC1	Q96IZ7	334 aa	Known RBP	4.37	□□□□□ -1.71
ATG4C-204	ENST00000414558	FAM20A	Q96MK3	541 aa		4.37	□□□□□ -1.71
ATG4C-204	ENST00000414558	CHST11	Q9NPF2	352 aa		4.37	□□□□□ -1.71
ATG4C-204	ENST00000414558	SLC35C2	Q9NQQ7	365 aa		4.37	□□□□□ -1.71
ATG4C-204	ENST00000414558	MUTYH	Q9UIF7	546 aa		4.37	□□□□□ -1.71
ATG4C-204	ENST00000414558	PADI2	Q9Y2J8	665 aa		4.37	□□□□□ -1.71
ATG4C-204	ENST00000414558	IGKV6D-41	A0A0C4DH26	115 aa		4.36	□□□□□ -1.71
ATG4C-204	ENST00000414558	hCG_1807616	A0A1W2PRN6	198 aa		4.36	□□□□□ -1.71
ATG4C-204	ENST00000414558	RBMS1	P29558	406 aa	Known RBP	4.36	□□□□□ -1.71
ATG4C-204	ENST00000414558	MTHFR	P42898	656 aa		4.36	□□□□□ -1.71
ATG4C-204	ENST00000414558	KLC1	Q07866	573 aa		4.36	□□□□□ -1.71
ATG4C-204	ENST00000414558	CUL4A	Q13619	759 aa		4.36	□□□□□ -1.71
ATG4C-204	ENST00000414558	EFTUD2	Q15029	972 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
ATG4C-204	ENST00000414558	SNAPC1	Q16533	368 aa		4.36	□□□□□ -1.71
ATG4C-204	ENST00000414558	UGT3A2	Q3SY77	523 aa		4.36	□□□□□ -1.71
ATG4C-204	ENST00000414558	CBWD6	Q4V339	395 aa		4.36	□□□□□ -1.71
ATG4C-204	ENST00000414558	CBWD3	Q5JTY5	395 aa		4.36	□□□□□ -1.71
ATG4C-204	ENST00000414558	UGT3A1	Q6NUS8	523 aa		4.36	□□□□□ -1.71
ATG4C-204	ENST00000414558	LINC00346	Q8IVM7	164 aa		4.36	□□□□□ -1.71
ATG4C-204	ENST00000414558	ZNF595	Q8IYB9	648 aa		4.36	□□□□□ -1.71
ATG4C-204	ENST00000414558		Q8N377	158 aa		4.36	□□□□□ -1.71
ATG4C-204	ENST00000414558	APOBEC4	Q8WW27	367 aa	Known RBP	4.36	□□□□□ -1.71
ATG4C-204	ENST00000414558	RASL10A	Q92737	203 aa		4.36	□□□□□ -1.71
ATG4C-204	ENST00000414558	THOC1	Q96FV9	657 aa	Known RBP	4.36	□□□□□ -1.71
ATG4C-204	ENST00000414558	PRICKLE1	Q96MT3	831 aa	Predicted RBP	4.36	□□□□□ -1.71
ATG4C-204	ENST00000414558	ABT1	Q9ULW3	272 aa	Known RBP	4.36	□□□□□ -1.71
ATG4C-204	ENST00000414558	TMEM5	Q9Y2B1	443 aa		4.36	□□□□□ -1.71
ATG4C-204	ENST00000414558	CSNK1G3	Q9Y6M4	447 aa		4.36	□□□□□ -1.71
ATG4C-204	ENST00000414558	ANKRD18B	A2A2Z9	1011 aa		4.35	□□□□□ -1.71
ATG4C-204	ENST00000414558	GLOD5	A6NK44	160 aa		4.35	□□□□□ -1.71
ATG4C-204	ENST00000414558		O00370	1275 aa		4.35	□□□□□ -1.71
ATG4C-204	ENST00000414558	ARPC2	O15144	300 aa		4.35	□□□□□ -1.71
ATG4C-204	ENST00000414558	GJB3	O75712	270 aa		4.35	□□□□□ -1.71
ATG4C-204	ENST00000414558	TRUB2	O95900	331 aa	Known RBP	4.35	□□□□□ -1.71
ATG4C-204	ENST00000414558	IGHV2-70	P01814	119 aa		4.35	□□□□□ -1.71
ATG4C-204	ENST00000414558	EIF2D	P41214	584 aa	Known RBP	4.35	□□□□□ -1.71
ATG4C-204	ENST00000414558	PGF	P49763	221 aa		4.35	□□□□□ -1.71
ATG4C-204	ENST00000414558	ALDH3A2	P51648	485 aa		4.35	□□□□□ -1.71
ATG4C-204	ENST00000414558	ZNF74	Q16587	644 aa		4.35	□□□□□ -1.71
ATG4C-204	ENST00000414558	MEA1	Q16626	185 aa		4.35	□□□□□ -1.71
ATG4C-204	ENST00000414558	PHKG1	Q16816	387 aa		4.35	□□□□□ -1.71
ATG4C-204	ENST00000414558	ITPRIPL1	Q6GPH6	555 aa		4.35	□□□□□ -1.71
ATG4C-204	ENST00000414558	KIF6	Q6ZMV9	814 aa		4.35	□□□□□ -1.71
ATG4C-204	ENST00000414558	THAP8	Q8NA92	274 aa		4.35	□□□□□ -1.71
ATG4C-204	ENST00000414558		Q8NBF4	154 aa		4.35	□□□□□ -1.71
ATG4C-204	ENST00000414558	ATL1	Q8WXF7	558 aa		4.35	□□□□□ -1.71
ATG4C-204	ENST00000414558	EVI5L	Q96CN4	794 aa		4.35	□□□□□ -1.71
ATG4C-204	ENST00000414558	RAB11FIP5	Q9BXF6	653 aa		4.35	□□□□□ -1.71
ATG4C-204	ENST00000414558	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
ATG4C-204	ENST00000414558	MRPL15	Q9P015	296 aa	Known RBP	4.35	□□□□□ -1.71
ATG4C-204	ENST00000414558	CRNN	Q9UBG3	495 aa	Predicted RBP	4.35	□□□□□ -1.71
ATG4C-204	ENST00000414558	FBXO2	Q9UK22	296 aa	Predicted RBP	4.35	□□□□□ -1.71
ATG4C-204	ENST00000414558	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
ATG4C-204	ENST00000414558	RSF1	Q96T23	1441 aa	Predicted RBP	4.35	□□□□□ -1.71
ATG4C-204	ENST00000414558	NEMP2	A6NFY4	417 aa		4.34	□□□□□ -1.71
ATG4C-204	ENST00000414558		H0YAE9	185 aa		4.34	□□□□□ -1.71
ATG4C-204	ENST00000414558	IGHE	P01854	428 aa		4.34	□□□□□ -1.71
ATG4C-204	ENST00000414558	PFKFB1	P16118	471 aa		4.34	□□□□□ -1.71
ATG4C-204	ENST00000414558	LBX1	P52954	281 aa		4.34	□□□□□ -1.71
ATG4C-204	ENST00000414558	PSMC6	P62333	389 aa		4.34	□□□□□ -1.71
ATG4C-204	ENST00000414558	CSNK2B	P67870	215 aa		4.34	□□□□□ -1.71
ATG4C-204	ENST00000414558	UBXN2A	P68543	259 aa		4.34	□□□□□ -1.71
ATG4C-204	ENST00000414558	MFSD12	Q6NUT3	480 aa		4.34	□□□□□ -1.71
ATG4C-204	ENST00000414558	NOTUM	Q6P988	496 aa		4.34	□□□□□ -1.71
ATG4C-204	ENST00000414558	MMD2	Q8IY49	270 aa		4.34	□□□□□ -1.71
ATG4C-204	ENST00000414558	TSPAN14	Q8NG11	270 aa		4.34	□□□□□ -1.71
ATG4C-204	ENST00000414558	PTER	Q96BW5	349 aa		4.34	□□□□□ -1.71
ATG4C-204	ENST00000414558	NXNL1	Q96CM4	212 aa		4.34	□□□□□ -1.71
ATG4C-204	ENST00000414558	TMCO6	Q96DC7	493 aa		4.34	□□□□□ -1.71
ATG4C-204	ENST00000414558	SPAG5	Q96R06	1193 aa		4.34	□□□□□ -1.71
ATG4C-204	ENST00000414558	GAL3ST4	Q96RP7	486 aa		4.34	□□□□□ -1.71
ATG4C-204	ENST00000414558	SOST	Q9BQB4	213 aa		4.34	□□□□□ -1.71
ATG4C-204	ENST00000414558	NDE1	Q9NXR1	346 aa		4.34	□□□□□ -1.71
ATG4C-204	ENST00000414558	GDE1	Q9NZC3	331 aa		4.34	□□□□□ -1.71
ATG4C-204	ENST00000414558	PPIE	Q9UNP9	301 aa	Known RBP	4.34	□□□□□ -1.71
ATG4C-204	ENST00000414558	TMED3	Q9Y3Q3	217 aa		4.34	□□□□□ -1.71
ATG4C-204	ENST00000414558	PCNX3	Q9H6A9	2034 aa		4.33	□□□□□ -1.72
ATG4C-204	ENST00000414558	ERAL1	O75616	437 aa	Known RBP	4.33	□□□□□ -1.72
ATG4C-204	ENST00000414558	LINGO3	P0C6S8	592 aa		4.33	□□□□□ -1.72

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