RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 DPH2Q9BQC3 489 aaPredicted RBP14.16□□□□□ -0.14
CHD1-202ENST00000414220 FAM117AQ9C073 453 aa14.16□□□□□ -0.14
CHD1-202ENST00000414220 ACTR5Q9H9F9 607 aaPredicted RBP14.16□□□□□ -0.14
CHD1-202ENST00000414220 LHX9Q9NQ69 397 aa14.16□□□□□ -0.14
CHD1-202ENST00000414220 ANKMY1Q9P2S6 941 aa14.16□□□□□ -0.14
CHD1-202ENST00000414220 SRPK3Q9UPE1 567 aa14.16□□□□□ -0.14
CHD1-202ENST00000414220 PSAT1Q9Y617 370 aa14.16□□□□□ -0.14
CHD1-202ENST00000414220 ZNF891A8MT65 544 aaPredicted RBP14.15□□□□□ -0.14
CHD1-202ENST00000414220 PRICKLE3O43900 615 aaPredicted RBP14.15□□□□□ -0.14
CHD1-202ENST00000414220 SRPX2O60687 465 aaPredicted RBP14.15□□□□□ -0.14
CHD1-202ENST00000414220 KRT37O76014 449 aa14.15□□□□□ -0.14
CHD1-202ENST00000414220 HRH2P25021 359 aa14.15□□□□□ -0.14
CHD1-202ENST00000414220 DLSTP36957 453 aa14.15□□□□□ -0.14
CHD1-202ENST00000414220 STAT5AP42229 794 aa14.15□□□□□ -0.14
CHD1-202ENST00000414220 ARSFP54793 590 aa14.15□□□□□ -0.14
CHD1-202ENST00000414220 RPS15P62841 145 aaKnown RBP14.15□□□□□ -0.14
CHD1-202ENST00000414220 TIAL1Q01085 375 aaKnown RBP eCLIP14.15□□□□□ -0.14
CHD1-202ENST00000414220 KBTBD12Q3ZCT8 623 aa14.15□□□□□ -0.14
CHD1-202ENST00000414220 SUSD1Q6UWL2 747 aa14.15□□□□□ -0.14
CHD1-202ENST00000414220 TIPARPQ7Z3E1 657 aaKnown RBP14.15□□□□□ -0.14
CHD1-202ENST00000414220 RELL1Q8IUW5 271 aa14.15□□□□□ -0.14
CHD1-202ENST00000414220 MCATQ8IVS2 390 aaKnown RBP14.15□□□□□ -0.14
CHD1-202ENST00000414220 DNAJC22Q8N4W6 341 aa14.15□□□□□ -0.14
CHD1-202ENST00000414220 TTC29Q8NA56 475 aaPredicted RBP14.15□□□□□ -0.14
CHD1-202ENST00000414220 OR2L3Q8NG85 312 aa14.15□□□□□ -0.14
CHD1-202ENST00000414220 OR2A1Q8NGT9 310 aa14.15□□□□□ -0.14
CHD1-202ENST00000414220 OR1L3Q8NH93 324 aa14.15□□□□□ -0.14
CHD1-202ENST00000414220 ZNF480Q8WV37 535 aa14.15□□□□□ -0.14
CHD1-202ENST00000414220 DLG3Q92796 817 aa14.15□□□□□ -0.14
CHD1-202ENST00000414220 MR1Q95460 341 aa14.15□□□□□ -0.14
CHD1-202ENST00000414220 OLFM1Q99784 485 aa14.15□□□□□ -0.14
CHD1-202ENST00000414220 NDC1Q9BTX1 674 aa14.15□□□□□ -0.14
CHD1-202ENST00000414220 ACAT2Q9BWD1 397 aa14.15□□□□□ -0.14
CHD1-202ENST00000414220 CCDC177Q9NQR7 707 aaPredicted RBP14.15□□□□□ -0.14
CHD1-202ENST00000414220 SMYD2Q9NRG4 433 aa14.15□□□□□ -0.14
CHD1-202ENST00000414220 TXLNGQ9NUQ3 528 aa14.15□□□□□ -0.14
CHD1-202ENST00000414220 ABCF3Q9NUQ8 709 aa14.15□□□□□ -0.14
CHD1-202ENST00000414220 ARL15Q9NXU5 204 aa14.15□□□□□ -0.14
CHD1-202ENST00000414220 EURLQ9NYK6 297 aa14.15□□□□□ -0.14
CHD1-202ENST00000414220 SNX7Q9UNH6 387 aa14.15□□□□□ -0.14
CHD1-202ENST00000414220 NOVA2Q9UNW9 492 aaKnown RBP14.15□□□□□ -0.14
CHD1-202ENST00000414220 PDE10AQ9Y233 779 aa14.15□□□□□ -0.14
CHD1-202ENST00000414220 IKBKGQ9Y6K9 419 aa14.15□□□□□ -0.14
CHD1-202ENST00000414220 EPG5Q9HCE0 2579 aa14.14□□□□□ -0.15
CHD1-202ENST00000414220 C21orf140B9A014 251 aa14.14□□□□□ -0.15
CHD1-202ENST00000414220 E7ENX8 843 aa14.14□□□□□ -0.15
CHD1-202ENST00000414220 ZNF749O43361 778 aa14.14□□□□□ -0.15
CHD1-202ENST00000414220 CD63P08962 238 aa14.14□□□□□ -0.15
CHD1-202ENST00000414220 LIFP15018 202 aa14.14□□□□□ -0.15
CHD1-202ENST00000414220 ZNF37AP17032 561 aaPredicted RBP14.14□□□□□ -0.15
CHD1-202ENST00000414220 TCN2P20062 427 aa14.14□□□□□ -0.15
CHD1-202ENST00000414220 GRIA3P42263 894 aa14.14□□□□□ -0.15
CHD1-202ENST00000414220 TAS2R39P59534 338 aa14.14□□□□□ -0.15
CHD1-202ENST00000414220 TAP2Q03519 686 aa14.14□□□□□ -0.15
CHD1-202ENST00000414220 PRDX1Q06830 199 aaKnown RBP14.14□□□□□ -0.15
CHD1-202ENST00000414220 FASTKQ14296 549 aaKnown RBP14.14□□□□□ -0.15
CHD1-202ENST00000414220 FAM214AQ32MH5 1076 aa14.14□□□□□ -0.15
CHD1-202ENST00000414220 YOD1Q5VVQ6 348 aaPredicted RBP14.14□□□□□ -0.15
CHD1-202ENST00000414220 KIAA1614Q5VZ46 1190 aa14.14□□□□□ -0.15
CHD1-202ENST00000414220 ICE2Q659A1 982 aa14.14□□□□□ -0.15
CHD1-202ENST00000414220 CAPN13Q6MZZ7 669 aaPredicted RBP14.14□□□□□ -0.15
CHD1-202ENST00000414220 AGTRAPQ6RW13 159 aa14.14□□□□□ -0.15
CHD1-202ENST00000414220 RAPH1Q70E73 1250 aa14.14□□□□□ -0.15
CHD1-202ENST00000414220 FRA10AC1Q70Z53 315 aa14.14□□□□□ -0.15
CHD1-202ENST00000414220 TAOK1Q7L7X3 1001 aa14.14□□□□□ -0.15
CHD1-202ENST00000414220 ADCK2Q7Z695 626 aa14.14□□□□□ -0.15
CHD1-202ENST00000414220 SNRNP27Q8WVK2 155 aaKnown RBP14.14□□□□□ -0.15
CHD1-202ENST00000414220 SLC45A3Q96JT2 553 aa14.14□□□□□ -0.15
CHD1-202ENST00000414220 SELENOSQ9BQE4 189 aa14.14□□□□□ -0.15
CHD1-202ENST00000414220 DPH7Q9BTV6 452 aa14.14□□□□□ -0.15
CHD1-202ENST00000414220 GPR87Q9BY21 358 aa14.14□□□□□ -0.15
CHD1-202ENST00000414220 FAM60AQ9NP50 221 aa14.14□□□□□ -0.15
CHD1-202ENST00000414220 CTNNAL1Q9UBT7 734 aa14.14□□□□□ -0.15
CHD1-202ENST00000414220 TAC3Q9UHF0 121 aa14.14□□□□□ -0.15
CHD1-202ENST00000414220 CROTQ9UKG9 612 aa14.14□□□□□ -0.15
CHD1-202ENST00000414220 MTO1Q9Y2Z2 717 aaKnown RBP14.14□□□□□ -0.15
CHD1-202ENST00000414220 FREM2Q5SZK8 3169 aa14.14□□□□□ -0.15
CHD1-202ENST00000414220 LOC101059948A0A1B0GTJ6 334 aa14.13□□□□□ -0.15
CHD1-202ENST00000414220 CXorf49A8MYA2 514 aaPredicted RBP14.13□□□□□ -0.15
CHD1-202ENST00000414220 MEN1O00255 615 aa14.13□□□□□ -0.15
CHD1-202ENST00000414220 ZSCAN9O15535 394 aaPredicted RBP14.13□□□□□ -0.15
CHD1-202ENST00000414220 KATNA1O75449 491 aa14.13□□□□□ -0.15
CHD1-202ENST00000414220 TIAF1O95411 115 aa14.13□□□□□ -0.15
CHD1-202ENST00000414220 ANXA5P08758 320 aa14.13□□□□□ -0.15
CHD1-202ENST00000414220 PIM1P11309 404 aaPredicted RBP14.13□□□□□ -0.15
CHD1-202ENST00000414220 RAB10P61026 200 aa14.13□□□□□ -0.15
CHD1-202ENST00000414220 ATP6V0D1P61421 351 aa14.13□□□□□ -0.15
CHD1-202ENST00000414220 GRM7Q14831 915 aa14.13□□□□□ -0.15
CHD1-202ENST00000414220 ZIC1Q15915 447 aa14.13□□□□□ -0.15
CHD1-202ENST00000414220 DEFB110Q30KQ9 67 aa14.13□□□□□ -0.15
CHD1-202ENST00000414220 CCDC91Q7Z6B0 441 aa14.13□□□□□ -0.15
CHD1-202ENST00000414220 ADAMTSL2Q86TH1 951 aa14.13□□□□□ -0.15
CHD1-202ENST00000414220 FAM20CQ8IXL6 584 aa14.13□□□□□ -0.15
CHD1-202ENST00000414220 PROKR1Q8TCW9 393 aa14.13□□□□□ -0.15
CHD1-202ENST00000414220 ALKBH8Q96BT7 664 aaKnown RBP14.13□□□□□ -0.15
CHD1-202ENST00000414220 MED8Q96G25 268 aa14.13□□□□□ -0.15
CHD1-202ENST00000414220 CATSPER2Q96P56 530 aa14.13□□□□□ -0.15
CHD1-202ENST00000414220 UBL7Q96S82 380 aaPredicted RBP14.13□□□□□ -0.15
CHD1-202ENST00000414220 GPR22Q99680 433 aa14.13□□□□□ -0.15
CHD1-202ENST00000414220 EGFL8Q99944 293 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms