RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 EEF1AKMT1Q8WVE0 214 aa14.24□□□□□ -0.13
LIMS4-201ENST00000413601 ACAT2Q9BWD1 397 aa14.24□□□□□ -0.13
LIMS4-201ENST00000413601 IRAK4Q9NWZ3 460 aa14.24□□□□□ -0.13
LIMS4-201ENST00000413601 EURLQ9NYK6 297 aa14.24□□□□□ -0.13
LIMS4-201ENST00000413601 TAS2R13Q9NYV9 303 aa14.24□□□□□ -0.13
LIMS4-201ENST00000413601 WHRNQ9P202 907 aa14.24□□□□□ -0.13
LIMS4-201ENST00000413601 FARSAQ9Y285 508 aaKnown RBP14.24□□□□□ -0.13
LIMS4-201ENST00000413601 ATRXP46100 2492 aa14.23□□□□□ -0.13
LIMS4-201ENST00000413601 CDC14CA4D256 554 aa14.23□□□□□ -0.13
LIMS4-201ENST00000413601 ZSCAN9O15535 394 aaPredicted RBP14.23□□□□□ -0.13
LIMS4-201ENST00000413601 ZBTB14O43829 449 aa14.23□□□□□ -0.13
LIMS4-201ENST00000413601 FKBP9O95302 570 aa14.23□□□□□ -0.13
LIMS4-201ENST00000413601 SLC16A8O95907 504 aa14.23□□□□□ -0.13
LIMS4-201ENST00000413601 SKIV2L2P42285 1042 aaKnown RBP14.23□□□□□ -0.13
LIMS4-201ENST00000413601 CCR10P46092 362 aa14.23□□□□□ -0.13
LIMS4-201ENST00000413601 PGGT1BP53609 377 aa14.23□□□□□ -0.13
LIMS4-201ENST00000413601 PNLIPRP1P54315 467 aa14.23□□□□□ -0.13
LIMS4-201ENST00000413601 C19orf57Q0VDD7 668 aa14.23□□□□□ -0.13
LIMS4-201ENST00000413601 FRG1Q14331 258 aaKnown RBP14.23□□□□□ -0.13
LIMS4-201ENST00000413601 C1orf189Q5VU69 101 aa14.23□□□□□ -0.13
LIMS4-201ENST00000413601 TLDC1Q6P9B6 456 aa14.23□□□□□ -0.13
LIMS4-201ENST00000413601 PAQR3Q6TCH7 311 aa14.23□□□□□ -0.13
LIMS4-201ENST00000413601 UBE2R2Q712K3 238 aaPredicted RBP14.23□□□□□ -0.13
LIMS4-201ENST00000413601 GPATCH11Q8N954 259 aa14.23□□□□□ -0.13
LIMS4-201ENST00000413601 FBXO15Q8NCQ5 510 aaPredicted RBP14.23□□□□□ -0.13
LIMS4-201ENST00000413601 PPFIBP2Q8ND30 876 aa14.23□□□□□ -0.13
LIMS4-201ENST00000413601 SMPDL3AQ92484 453 aa14.23□□□□□ -0.13
LIMS4-201ENST00000413601 ZUFSPQ96AP4 578 aa14.23□□□□□ -0.13
LIMS4-201ENST00000413601 GRHL1Q9NZI5 618 aa14.23□□□□□ -0.13
LIMS4-201ENST00000413601 DHCR7Q9UBM7 475 aaKnown RBP14.23□□□□□ -0.13
LIMS4-201ENST00000413601 PSAT1Q9Y617 370 aa14.23□□□□□ -0.13
LIMS4-201ENST00000413601 AP1M2Q9Y6Q5 423 aa14.23□□□□□ -0.13
LIMS4-201ENST00000413601 TARM1B6A8C7 271 aa14.22□□□□□ -0.13
LIMS4-201ENST00000413601 EIF3FO00303 357 aaPredicted RBP14.22□□□□□ -0.13
LIMS4-201ENST00000413601 NRP2O60462 931 aa14.22□□□□□ -0.13
LIMS4-201ENST00000413601 CTSVO60911 334 aa14.22□□□□□ -0.13
LIMS4-201ENST00000413601 CAPN1P07384 714 aa14.22□□□□□ -0.13
LIMS4-201ENST00000413601 RPA3P35244 121 aaPredicted RBP14.22□□□□□ -0.13
LIMS4-201ENST00000413601 RGS4P49798 205 aa14.22□□□□□ -0.13
LIMS4-201ENST00000413601 POLE2P56282 527 aa14.22□□□□□ -0.13
LIMS4-201ENST00000413601 MGAT5Q09328 741 aa14.22□□□□□ -0.13
LIMS4-201ENST00000413601 CBLBQ13191 982 aa14.22□□□□□ -0.13
LIMS4-201ENST00000413601 ARHGAP19Q14CB8 494 aa14.22□□□□□ -0.13
LIMS4-201ENST00000413601 ZC3H12BQ5HYM0 836 aaKnown RBP14.22□□□□□ -0.13
LIMS4-201ENST00000413601 HECTD2Q5U5R9 776 aa14.22□□□□□ -0.13
LIMS4-201ENST00000413601 FAM69BQ5VUD6 431 aa14.22□□□□□ -0.13
LIMS4-201ENST00000413601 ZNF385CQ66K41 422 aaPredicted RBP14.22□□□□□ -0.13
LIMS4-201ENST00000413601 RHBDD2Q6NTF9 364 aa14.22□□□□□ -0.13
LIMS4-201ENST00000413601 CAPN12Q6ZSI9 719 aa14.22□□□□□ -0.13
LIMS4-201ENST00000413601 ZNF572Q7Z3I7 529 aaPredicted RBP14.22□□□□□ -0.13
LIMS4-201ENST00000413601 ENDOVQ8N8Q3 282 aaKnown RBP14.22□□□□□ -0.13
LIMS4-201ENST00000413601 ZNF480Q8WV37 535 aa14.22□□□□□ -0.13
LIMS4-201ENST00000413601 DLG3Q92796 817 aa14.22□□□□□ -0.13
LIMS4-201ENST00000413601 NLNQ9BYT8 704 aa14.22□□□□□ -0.13
LIMS4-201ENST00000413601 SAYSD1Q9NPB0 183 aa14.22□□□□□ -0.13
LIMS4-201ENST00000413601 STARD5Q9NSY2 213 aa14.22□□□□□ -0.13
LIMS4-201ENST00000413601 ABCF3Q9NUQ8 709 aa14.22□□□□□ -0.13
LIMS4-201ENST00000413601 MOCS1Q9NZB8 636 aa14.22□□□□□ -0.13
LIMS4-201ENST00000413601 ZFATQ9P243 1243 aa14.22□□□□□ -0.13
LIMS4-201ENST00000413601 ADAMTS6Q9UKP5 1117 aa14.22□□□□□ -0.13
LIMS4-201ENST00000413601 VWA7Q9Y334 891 aa14.22□□□□□ -0.13
LIMS4-201ENST00000413601 UTP11Q9Y3A2 253 aaKnown RBP14.22□□□□□ -0.13
LIMS4-201ENST00000413601 COL6A6A6NMZ7 2263 aa14.21□□□□□ -0.13
LIMS4-201ENST00000413601 PIEZO2Q9H5I5 2752 aa14.21□□□□□ -0.13
LIMS4-201ENST00000413601 ZNF839A8K0R7 811 aa14.21□□□□□ -0.13
LIMS4-201ENST00000413601 E7ENX8 843 aa14.21□□□□□ -0.13
LIMS4-201ENST00000413601 URI1O94763 535 aaPredicted RBP14.21□□□□□ -0.13
LIMS4-201ENST00000413601 RECKO95980 971 aa14.21□□□□□ -0.13
LIMS4-201ENST00000413601 RAB40ALP0C0E4 278 aa14.21□□□□□ -0.13
LIMS4-201ENST00000413601 AGXTP21549 392 aa14.21□□□□□ -0.13
LIMS4-201ENST00000413601 CMPK1P30085 196 aa14.21□□□□□ -0.13
LIMS4-201ENST00000413601 HSD17B2P37059 387 aa14.21□□□□□ -0.13
LIMS4-201ENST00000413601 NFKB2Q00653 900 aa14.21□□□□□ -0.13
LIMS4-201ENST00000413601 TAP2Q03519 686 aa14.21□□□□□ -0.13
LIMS4-201ENST00000413601 PDAP1Q13442 181 aaKnown RBP14.21□□□□□ -0.13
LIMS4-201ENST00000413601 IL10RAQ13651 578 aa14.21□□□□□ -0.13
LIMS4-201ENST00000413601 TRADDQ15628 312 aa14.21□□□□□ -0.13
LIMS4-201ENST00000413601 LRRC8EQ6NSJ5 796 aa14.21□□□□□ -0.13
LIMS4-201ENST00000413601 FAM198BQ6UWH4 519 aa14.21□□□□□ -0.13
LIMS4-201ENST00000413601 SYVN1Q86TM6 617 aa14.21□□□□□ -0.13
LIMS4-201ENST00000413601 PYROXD1Q8WU10 500 aa14.21□□□□□ -0.13
LIMS4-201ENST00000413601 APOBEC4Q8WW27 367 aaKnown RBP14.21□□□□□ -0.13
LIMS4-201ENST00000413601 LINGO1Q96FE5 620 aa14.21□□□□□ -0.13
LIMS4-201ENST00000413601 GBP5Q96PP8 586 aa14.21□□□□□ -0.13
LIMS4-201ENST00000413601 OLFM1Q99784 485 aa14.21□□□□□ -0.13
LIMS4-201ENST00000413601 DPH2Q9BQC3 489 aaPredicted RBP14.21□□□□□ -0.13
LIMS4-201ENST00000413601 SELENOSQ9BQE4 189 aa14.21□□□□□ -0.13
LIMS4-201ENST00000413601 DPH7Q9BTV6 452 aa14.21□□□□□ -0.13
LIMS4-201ENST00000413601 NDC1Q9BTX1 674 aa14.21□□□□□ -0.13
LIMS4-201ENST00000413601 RAB17Q9H0T7 212 aa14.21□□□□□ -0.13
LIMS4-201ENST00000413601 SLC6A20Q9NP91 592 aa14.21□□□□□ -0.13
LIMS4-201ENST00000413601 MRPS30Q9NP92 439 aaKnown RBP14.21□□□□□ -0.13
LIMS4-201ENST00000413601 TXLNGQ9NUQ3 528 aa14.21□□□□□ -0.13
LIMS4-201ENST00000413601 GEMIN8Q9NWZ8 242 aaKnown RBP14.21□□□□□ -0.13
LIMS4-201ENST00000413601 TAC3Q9UHF0 121 aa14.21□□□□□ -0.13
LIMS4-201ENST00000413601 CDC23Q9UJX2 597 aa14.21□□□□□ -0.13
LIMS4-201ENST00000413601 CORO1CQ9ULV4 474 aaPredicted RBP14.21□□□□□ -0.13
LIMS4-201ENST00000413601 SRPK3Q9UPE1 567 aa14.21□□□□□ -0.13
LIMS4-201ENST00000413601 POLHQ9Y253 713 aa14.21□□□□□ -0.13
LIMS4-201ENST00000413601 KLK4Q9Y5K2 254 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms