RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 TRAM1L1Q8N609 369 aa16.66■□□□□ 0.26
PTPRC-206ENST00000413409 CLDN19Q8N6F1 224 aa16.66■□□□□ 0.26
PTPRC-206ENST00000413409 MRPL1Q9BYD6 325 aaKnown RBP16.66■□□□□ 0.26
PTPRC-206ENST00000413409 TUBB1Q9H4B7 451 aa16.66■□□□□ 0.26
PTPRC-206ENST00000413409 TMEM45AQ9NWC5 275 aa16.66■□□□□ 0.26
PTPRC-206ENST00000413409 PTBP2Q9UKA9 531 aaKnown RBP16.66■□□□□ 0.26
PTPRC-206ENST00000413409 ST14Q9Y5Y6 855 aa16.66■□□□□ 0.26
PTPRC-206ENST00000413409 UTP20O75691 2785 aaKnown RBP16.65■□□□□ 0.26
PTPRC-206ENST00000413409 TP53BP1Q12888 1972 aaPredicted RBP16.65■□□□□ 0.26
PTPRC-206ENST00000413409 TLN1Q9Y490 2541 aaKnown RBP16.65■□□□□ 0.26
PTPRC-206ENST00000413409 QSOX1O00391 747 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 NPC1O15118 1278 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 KLK10O43240 276 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 NUAK1O60285 661 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 PDE5AO76074 875 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 IGHV4-34P06331 123 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 EPHX1P07099 455 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 CTSLP07711 333 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 SNRPB2P08579 225 aaKnown RBP16.65■□□□□ 0.26
PTPRC-206ENST00000413409 ALDOCP09972 364 aaKnown RBP16.65■□□□□ 0.26
PTPRC-206ENST00000413409 MPC1LP0DKB6 136 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 C7P10643 843 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 VCLP18206 1134 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 ITGB6P18564 788 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 GPX3P22352 226 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 MMP12P39900 470 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 PSMD8P48556 350 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 PIK3CGP48736 1102 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 AP2B1P63010 937 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 CDKL1Q00532 357 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 RALGDSQ12967 914 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 SP140Q13342 867 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 AGKQ53H12 422 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 REP15Q6BDI9 236 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 DDIASQ8IXT1 998 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 EXD3Q8N9H8 876 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 DDHD1Q8NEL9 900 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 OR2T3Q8NH03 318 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 ZNF578Q96N58 590 aaPredicted RBP16.65■□□□□ 0.26
PTPRC-206ENST00000413409 KCNA7Q96RP8 456 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 ZSCAN5AQ9BUG6 496 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 FAM83DQ9H4H8 585 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 WDR41Q9HAD4 459 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 MRPL40Q9NQ50 206 aaKnown RBP16.65■□□□□ 0.26
PTPRC-206ENST00000413409 RIC8BQ9NVN3 520 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 ELOVL2Q9NXB9 296 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 ANKMY1Q9P2S6 941 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 ZNF225Q9UK10 706 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 POMPQ9Y244 141 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 RELNP78509 3460 aa16.65■□□□□ 0.26
PTPRC-206ENST00000413409 KPNA5O15131 536 aa16.64■□□□□ 0.25
PTPRC-206ENST00000413409 OTCP00480 354 aa16.64■□□□□ 0.25
PTPRC-206ENST00000413409 PRNPP04156 253 aa16.64■□□□□ 0.25
PTPRC-206ENST00000413409 IDO1P14902 403 aa16.64■□□□□ 0.25
PTPRC-206ENST00000413409 XPAP23025 273 aaPredicted RBP16.64■□□□□ 0.25
PTPRC-206ENST00000413409 AOAHP28039 575 aa16.64■□□□□ 0.25
PTPRC-206ENST00000413409 VHLP40337 213 aa16.64■□□□□ 0.25
PTPRC-206ENST00000413409 PTDSS1P48651 473 aaKnown RBP16.64■□□□□ 0.25
PTPRC-206ENST00000413409 C21orf59P57076 290 aa16.64■□□□□ 0.25
PTPRC-206ENST00000413409 NFATC3Q12968 1075 aa16.64■□□□□ 0.25
PTPRC-206ENST00000413409 BNIP3Q12983 259 aa16.64■□□□□ 0.25
PTPRC-206ENST00000413409 ILKQ13418 452 aa16.64■□□□□ 0.25
PTPRC-206ENST00000413409 PIGGQ5H8A4 983 aa16.64■□□□□ 0.25
PTPRC-206ENST00000413409 COQ5Q5HYK3 327 aa16.64■□□□□ 0.25
PTPRC-206ENST00000413409 PLEKHS1Q5SXH7 462 aa16.64■□□□□ 0.25
PTPRC-206ENST00000413409 HENMT1Q5T8I9 393 aaKnown RBP16.64■□□□□ 0.25
PTPRC-206ENST00000413409 ERAP2Q6P179 960 aa16.64■□□□□ 0.25
PTPRC-206ENST00000413409 RFLNAQ6ZTI6 216 aa16.64■□□□□ 0.25
PTPRC-206ENST00000413409 NEK10Q6ZWH5 1172 aa16.64■□□□□ 0.25
PTPRC-206ENST00000413409 GOLGA7Q7Z5G4 137 aa16.64■□□□□ 0.25
PTPRC-206ENST00000413409 HSD11B1LQ7Z5J1 315 aa16.64■□□□□ 0.25
PTPRC-206ENST00000413409 NRSN1Q8IZ57 195 aa16.64■□□□□ 0.25
PTPRC-206ENST00000413409 MIER2Q8N344 545 aa16.64■□□□□ 0.25
PTPRC-206ENST00000413409 TCAIMQ8N3R3 496 aa16.64■□□□□ 0.25
PTPRC-206ENST00000413409 KCNE4Q8WWG9 221 aa16.64■□□□□ 0.25
PTPRC-206ENST00000413409 TUBGCP3Q96CW5 907 aa16.64■□□□□ 0.25
PTPRC-206ENST00000413409 DCUN1D1Q96GG9 259 aa16.64■□□□□ 0.25
PTPRC-206ENST00000413409 SLC6A18Q96N87 628 aa16.64■□□□□ 0.25
PTPRC-206ENST00000413409 VPS35Q96QK1 796 aa16.64■□□□□ 0.25
PTPRC-206ENST00000413409 SPATA16Q9BXB7 569 aa16.64■□□□□ 0.25
PTPRC-206ENST00000413409 BCAP29Q9UHQ4 241 aa16.64■□□□□ 0.25
PTPRC-206ENST00000413409 TMPRSS11EQ9UL52 423 aa16.64■□□□□ 0.25
PTPRC-206ENST00000413409 ASB1Q9Y576 335 aa16.64■□□□□ 0.25
PTPRC-206ENST00000413409 USP9YO00507 2555 aaPredicted RBP16.63■□□□□ 0.25
PTPRC-206ENST00000413409 A0A1B0GTL3 188 aa16.63■□□□□ 0.25
PTPRC-206ENST00000413409 EDDM13A0A1B0GTR0 161 aa16.63■□□□□ 0.25
PTPRC-206ENST00000413409 WNT9AO14904 365 aa16.63■□□□□ 0.25
PTPRC-206ENST00000413409 SLC16A5O15375 505 aa16.63■□□□□ 0.25
PTPRC-206ENST00000413409 MT-CO3P00414 261 aa16.63■□□□□ 0.25
PTPRC-206ENST00000413409 C8GP07360 202 aa16.63■□□□□ 0.25
PTPRC-206ENST00000413409 ATP1B2P14415 290 aaPredicted RBP16.63■□□□□ 0.25
PTPRC-206ENST00000413409 CD1EP15812 388 aa16.63■□□□□ 0.25
PTPRC-206ENST00000413409 RACK1P63244 317 aaKnown RBP16.63■□□□□ 0.25
PTPRC-206ENST00000413409 CAMK2GQ13555 558 aaPredicted RBP16.63■□□□□ 0.25
PTPRC-206ENST00000413409 GTF2H2Q13888 395 aa16.63■□□□□ 0.25
PTPRC-206ENST00000413409 CCNIQ14094 377 aa16.63■□□□□ 0.25
PTPRC-206ENST00000413409 ZNF284Q2VY69 593 aa16.63■□□□□ 0.25
PTPRC-206ENST00000413409 LRRC73Q5JTD7 316 aa16.63■□□□□ 0.25
PTPRC-206ENST00000413409 GTF2H2CQ6P1K8 395 aa16.63■□□□□ 0.25
PTPRC-206ENST00000413409 PARS2Q7L3T8 475 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms