RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 PAFAH1B3Q15102 231 aaKnown RBP5.21□□□□□ -1.58
LINC00342-201ENST00000412393 PDK2Q15119 407 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 ELOCQ15369 112 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 TBCCQ15814 346 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 CDKN3Q16667 212 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 ATP13A4Q4VNC1 1196 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 KHDC1Q4VXA5 237 aaKnown RBP5.21□□□□□ -1.58
LINC00342-201ENST00000412393 LRRC23Q53EV4 343 aaPredicted RBP5.21□□□□□ -1.58
LINC00342-201ENST00000412393 MARC1Q5VT66 337 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 C19orf48Q6RUI8 117 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 ENPP7Q6UWV6 458 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 EFL1Q7Z2Z2 1120 aaKnown RBP5.21□□□□□ -1.58
LINC00342-201ENST00000412393 RD3Q7Z3Z2 195 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 LCA5Q86VQ0 697 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 TMEM126BQ8IUX1 230 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 LRRC49Q8IUZ0 686 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 MAP7D3Q8IWC1 876 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 SLC35F3Q8IY50 421 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 ARHGAP24Q8N264 748 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 PGBD5Q8N414 524 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 FSTL5Q8N475 847 aaPredicted RBP5.21□□□□□ -1.58
LINC00342-201ENST00000412393 DCBLD1Q8N8Z6 715 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 CCDC89Q8N998 374 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 KCTD6Q8NC69 237 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 PPFIBP2Q8ND30 876 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 B4GALNT2Q8NHY0 566 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 IFI44Q8TCB0 444 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 MAPK15Q8TD08 544 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 PDCD6IPQ8WUM4 868 aaKnown RBP5.21□□□□□ -1.58
LINC00342-201ENST00000412393 TSACCQ96A04 125 aaPredicted RBP5.21□□□□□ -1.58
LINC00342-201ENST00000412393 NSL1Q96IY1 281 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 WDR92Q96MX6 357 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 OLFM3Q96PB7 478 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 ZNF184Q99676 751 aaPredicted RBP5.21□□□□□ -1.58
LINC00342-201ENST00000412393 MGME1Q9BQP7 344 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 DHRS4Q9BTZ2 278 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 LRRC61Q9BV99 259 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 SPATA16Q9BXB7 569 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 TRIM4Q9C037 500 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 CLPBQ9H078 707 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 IQCGQ9H095 443 aaKnown RBP5.21□□□□□ -1.58
LINC00342-201ENST00000412393 ABCG4Q9H172 646 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 NT5MQ9NPB1 228 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 NMRK1Q9NWW6 199 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 NCKIPSDQ9NZQ3 722 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 RCOR3Q9P2K3 495 aaPredicted RBP5.21□□□□□ -1.58
LINC00342-201ENST00000412393 B4GALT6Q9UBX8 382 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 KLQ9UEF7 1012 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 RALYQ9UKM9 306 aaKnown RBP5.21□□□□□ -1.58
LINC00342-201ENST00000412393 ITGB1BP2Q9UKP3 347 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 PNMA8BQ9ULN7 279 aaPredicted RBP5.21□□□□□ -1.58
LINC00342-201ENST00000412393 PHTF1Q9UMS5 762 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 EFR3BQ9Y2G0 817 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 MTO1Q9Y2Z2 717 aaKnown RBP5.21□□□□□ -1.58
LINC00342-201ENST00000412393 OR1A2Q9Y585 309 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 U3KQA8 63 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 SCN8AQ9UQD0 1980 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 ANKRD11Q6UB99 2663 aaPredicted RBP5.21□□□□□ -1.58
LINC00342-201ENST00000412393 PKD1L2Q7Z442 2459 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 DMXL2Q8TDJ6 3036 aa5.21□□□□□ -1.58
LINC00342-201ENST00000412393 TMEM202A6NGA9 273 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 A8MUI8 341 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 CACNB4O00305 520 aaPredicted RBP5.2□□□□□ -1.58
LINC00342-201ENST00000412393 YY2O15391 372 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 ZSCAN9O15535 394 aaPredicted RBP5.2□□□□□ -1.58
LINC00342-201ENST00000412393 MFSD11O43934 449 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 FKBP6O75344 327 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 CSO75390 466 aaKnown RBP5.2□□□□□ -1.58
LINC00342-201ENST00000412393 PGLSO95336 258 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 PSMG1O95456 288 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 LYNP07948 512 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 ALPIP09923 528 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 DHRS4L1P0CG22 281 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 PTPN7P35236 360 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 PEX19P40855 299 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 GARSP41250 739 aaKnown RBP5.2□□□□□ -1.58
LINC00342-201ENST00000412393 KIAA1024LP59773 190 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 ITKQ08881 620 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 GALNT2Q10471 571 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 TRAF2Q12933 501 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 DUSP8Q13202 625 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 KLF1Q13351 362 aaPredicted RBP5.2□□□□□ -1.58
LINC00342-201ENST00000412393 SNX1Q13596 522 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 ARHGEF7Q14155 803 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 MESDQ14696 234 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 TCEA2Q15560 299 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 ADRM1Q16186 407 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 CNGA3Q16281 694 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 ALG11Q2TAA5 492 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 COL28A1Q2UY09 1125 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 TRMT5Q32P41 509 aaKnown RBP5.2□□□□□ -1.58
LINC00342-201ENST00000412393 LIN52Q52LA3 116 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 ARMC12Q5T9G4 340 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 SEL1L2Q5TEA6 688 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 FOXB2Q5VYV0 432 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 NCBP2-AS2Q69YL0 99 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 TIGD7Q6NT04 549 aaPredicted RBP5.2□□□□□ -1.58
LINC00342-201ENST00000412393 ESRP1Q6NXG1 681 aaKnown RBP5.2□□□□□ -1.58
LINC00342-201ENST00000412393 GUSBP11Q6P575 273 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 LVRNQ6Q4G3 990 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms