RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 ATXN7L3BQ96GX2 97 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 SLC45A3Q96JT2 553 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 FAM20AQ96MK3 541 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 SPAG5Q96R06 1193 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 CCDC3Q9BQI4 270 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 KIFC3Q9BVG8 833 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 TDRD1Q9BXT4 1180 aaKnown RBP1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 FAM49AQ9H0Q0 323 aaPredicted RBP1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 MMP27Q9H306 513 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 NDE1Q9NXR1 346 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 ZNF215Q9UL58 517 aaPredicted RBP1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 ZNF510Q9Y2H8 683 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 PTRH2Q9Y3E5 179 aaKnown RBP1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 TMED3Q9Y3Q3 217 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 TRIM17Q9Y577 477 aa1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 ZNF644Q9H582 1327 aaPredicted RBP1.6□□□□□ -2.15
RNU2-54P-201ENST00000410299 A8MXK9 166 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 FPGTO14772 594 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 PHOX2AO14813 284 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 TOMM70O94826 608 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 DUX4L4P0CJ87 422 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 THEGLP0DJG4 465 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 HAPLN1P10915 354 aaPredicted RBP1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 FOLR2P14207 255 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 TNFAIP3P21580 790 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 PDHA2P29803 388 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 HLA-FP30511 346 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 GCH1P30793 250 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 PSMB10P40306 273 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 SOX3P41225 446 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 CDH13P55290 713 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 EXT1Q16394 746 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 C15orf32Q32M92 178 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 RNF212Q495C1 297 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 SLC35D3Q5M8T2 416 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 KRT79Q5XKE5 535 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 SEL1L3Q68CR1 1132 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 TMEM211Q6ICI0 200 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 GDPGP1Q6ZNW5 385 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 ADGRA1Q86SQ6 560 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 TBC1D1Q86TI0 1168 aaPredicted RBP1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 MMD2Q8IY49 270 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 ABHD12Q8N2K0 398 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 METTL4Q8N3J2 472 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 SLC37A3Q8NCC5 494 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 EXD1Q8NHP7 514 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 PTPMT1Q8WUK0 201 aaPredicted RBP1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 SYN2Q92777 582 aaPredicted RBP1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 SPDL1Q96EA4 605 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 CNRIP1Q96F85 164 aaPredicted RBP1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 THOC1Q96FV9 657 aaKnown RBP1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 CCDC34Q96HJ3 373 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 FAM218AQ96MZ4 157 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 MS4A10Q96PG2 267 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 MAK16Q9BXY0 300 aaKnown RBP1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 OSGEPL1Q9H4B0 414 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 OPA3Q9H6K4 179 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 B3GAT2Q9NPZ5 323 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 STAU2Q9NUL3 570 aaKnown RBP eCLIP1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 C19orf25Q9UFG5 118 aaPredicted RBP1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 PADI2Q9Y2J8 665 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 WBP11Q9Y2W2 641 aaKnown RBP1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 NME7Q9Y5B8 376 aa1.59□□□□□ -2.15
RNU2-54P-201ENST00000410299 LOC105371242A0A075B767 164 aa1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 LOC102723996A0A087X1L8 192 aa1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 GPR75-ASB3A0A0A6YYF3 556 aa1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 SHISA7A6NL88 538 aa1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 AGAP14A8MT82 685 aa1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 KLLNB2CW77 178 aa1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 SHISA9B4DS77 424 aa1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 DOK2O60496 412 aa1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 POP4O95707 220 aaKnown RBP1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 HOXD4P09016 255 aaPredicted RBP1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 GP9P14770 177 aa1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 RPL35AP18077 110 aaKnown RBP1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 BCL3P20749 454 aa1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 IL4RP24394 825 aa1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 MPZP25189 248 aa1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 OXTRP30559 389 aa1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 ETV5P41161 510 aa1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 MTHFRP42898 656 aa1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 NRIP1P48552 1158 aa1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 CLCN4P51793 760 aa1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 HNRNPKP61978 463 aaKnown RBP eCLIP1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 MC1RQ01726 317 aa1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 CDH18Q13634 790 aa1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 FAM189A2Q15884 450 aa1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 DUSP28Q4G0W2 176 aa1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 HIGD2BQ4VC39 106 aa1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 HSP90AB4PQ58FF6 505 aa1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 C11orf63Q6NUN7 778 aa1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 LEKR1Q6ZMV7 388 aa1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 SZRD1Q7Z422 152 aa1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 MAATS1Q7Z4T9 603 aa1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 ZNF595Q8IYB9 648 aa1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 LGI2Q8N0V4 545 aa1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 C17orf53Q8N3J3 647 aaPredicted RBP1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 GUF1Q8N442 669 aaKnown RBP1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.58□□□□□ -2.16
RNU2-54P-201ENST00000410299 POC5Q8NA72 575 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 238.9 ms