RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 COG1Q8WTW3 980 aa13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 SMPDL3AQ92484 453 aa13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 INPP5DQ92835 1189 aa13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 FKBP10Q96AY3 582 aa13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 ZNF669Q96BR6 464 aaPredicted RBP13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 RNF31Q96EP0 1072 aa13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 VPS50Q96JG6 964 aa13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 ZNF285Q96NJ3 590 aa13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 RUFY1Q96T51 708 aa13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 FAM167BQ9BTA0 163 aa13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 WDR54Q9H977 334 aa13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 TP53TG5Q9Y2B4 290 aa13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 ZNF451Q9Y4E5 1061 aa13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 A0A1B0GX78 115 aa13.95□□□□□ -0.18
NIF3L1-205ENST00000409588 FITM1A5D6W6 292 aa13.95□□□□□ -0.18
NIF3L1-205ENST00000409588 MYO1CO00159 1063 aa13.95□□□□□ -0.18
NIF3L1-205ENST00000409588 PEX12O00623 359 aa13.95□□□□□ -0.18
NIF3L1-205ENST00000409588 ZBTB14O43829 449 aa13.95□□□□□ -0.18
NIF3L1-205ENST00000409588 NIPSNAP2O75323 286 aa13.95□□□□□ -0.18
NIF3L1-205ENST00000409588 MPC1LP0DKB6 136 aa13.95□□□□□ -0.18
NIF3L1-205ENST00000409588 ERGP11308 486 aa13.95□□□□□ -0.18
NIF3L1-205ENST00000409588 ITGAXP20702 1163 aa13.95□□□□□ -0.18
NIF3L1-205ENST00000409588 ALAS2P22557 587 aa13.95□□□□□ -0.18
NIF3L1-205ENST00000409588 CMPK1P30085 196 aa13.95□□□□□ -0.18
NIF3L1-205ENST00000409588 FOLR3P41439 243 aa13.95□□□□□ -0.18
NIF3L1-205ENST00000409588 GRIA3P42263 894 aa13.95□□□□□ -0.18
NIF3L1-205ENST00000409588 GCGRP47871 477 aa13.95□□□□□ -0.18
NIF3L1-205ENST00000409588 CCL11P51671 97 aa13.95□□□□□ -0.18
NIF3L1-205ENST00000409588 CLCN7P51798 805 aa13.95□□□□□ -0.18
NIF3L1-205ENST00000409588 KLHL38Q2WGJ6 581 aa13.95□□□□□ -0.18
NIF3L1-205ENST00000409588 FCRL6Q6DN72 434 aa13.95□□□□□ -0.18
NIF3L1-205ENST00000409588 MRPL14Q6P1L8 145 aaKnown RBP13.95□□□□□ -0.18
NIF3L1-205ENST00000409588 TTC29Q8NA56 475 aaPredicted RBP13.95□□□□□ -0.18
NIF3L1-205ENST00000409588 OR2L3Q8NG85 312 aa13.95□□□□□ -0.18
NIF3L1-205ENST00000409588 OR2A1Q8NGT9 310 aa13.95□□□□□ -0.18
NIF3L1-205ENST00000409588 SELENOSQ9BQE4 189 aa13.95□□□□□ -0.18
NIF3L1-205ENST00000409588 SLC26A1Q9H2B4 701 aa13.95□□□□□ -0.18
NIF3L1-205ENST00000409588 C20orf96Q9NUD7 363 aaPredicted RBP13.95□□□□□ -0.18
NIF3L1-205ENST00000409588 C5AR2Q9P296 337 aa13.95□□□□□ -0.18
NIF3L1-205ENST00000409588 RNF14Q9UBS8 474 aa13.95□□□□□ -0.18
NIF3L1-205ENST00000409588 NXT1Q9UKK6 140 aaKnown RBP13.95□□□□□ -0.18
NIF3L1-205ENST00000409588 DHRS7Q9Y394 339 aa13.95□□□□□ -0.18
NIF3L1-205ENST00000409588 NFS1Q9Y697 457 aa13.95□□□□□ -0.18
NIF3L1-205ENST00000409588 MAD1L1Q9Y6D9 718 aa13.95□□□□□ -0.18
NIF3L1-205ENST00000409588 BSNQ9UPA5 3926 aa13.94□□□□□ -0.18
NIF3L1-205ENST00000409588 ARGFXA6NJG6 315 aa13.94□□□□□ -0.18
NIF3L1-205ENST00000409588 GOLGA8MH3BSY2 632 aa13.94□□□□□ -0.18
NIF3L1-205ENST00000409588 GFYI3L273 518 aa13.94□□□□□ -0.18
NIF3L1-205ENST00000409588 TXNDC9O14530 226 aa13.94□□□□□ -0.18
NIF3L1-205ENST00000409588 NDC80O14777 642 aa13.94□□□□□ -0.18
NIF3L1-205ENST00000409588 DSCR3O14972 297 aa13.94□□□□□ -0.18
NIF3L1-205ENST00000409588 HCRTR1O43613 425 aa13.94□□□□□ -0.18
NIF3L1-205ENST00000409588 CCNDBP1O95273 360 aa13.94□□□□□ -0.18
NIF3L1-205ENST00000409588 PGAM1P18669 254 aa13.94□□□□□ -0.18
NIF3L1-205ENST00000409588 HRH2P25021 359 aa13.94□□□□□ -0.18
NIF3L1-205ENST00000409588 SOX8P57073 446 aa13.94□□□□□ -0.18
NIF3L1-205ENST00000409588 ABATP80404 500 aa13.94□□□□□ -0.18
NIF3L1-205ENST00000409588 RNASEH2BQ5TBB1 312 aaKnown RBP13.94□□□□□ -0.18
NIF3L1-205ENST00000409588 PRMT9Q6P2P2 845 aa13.94□□□□□ -0.18
NIF3L1-205ENST00000409588 CNSTQ6PJW8 725 aa13.94□□□□□ -0.18
NIF3L1-205ENST00000409588 KIAA0408Q6ZU52 694 aa13.94□□□□□ -0.18
NIF3L1-205ENST00000409588 OVCH1Q7RTY7 1134 aa13.94□□□□□ -0.18
NIF3L1-205ENST00000409588 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.94□□□□□ -0.18
NIF3L1-205ENST00000409588 ASB11Q8WXH4 323 aa13.94□□□□□ -0.18
NIF3L1-205ENST00000409588 IL17FQ96PD4 163 aa13.94□□□□□ -0.18
NIF3L1-205ENST00000409588 EBNA1BP2Q99848 306 aaKnown RBP13.94□□□□□ -0.18
NIF3L1-205ENST00000409588 EPN3Q9H201 632 aa13.94□□□□□ -0.18
NIF3L1-205ENST00000409588 FBXO5Q9UKT4 447 aa13.94□□□□□ -0.18
NIF3L1-205ENST00000409588 DNALI1O14645 258 aaPredicted RBP13.93□□□□□ -0.18
NIF3L1-205ENST00000409588 DPM1O60762 260 aa13.93□□□□□ -0.18
NIF3L1-205ENST00000409588 VPS26AO75436 327 aa13.93□□□□□ -0.18
NIF3L1-205ENST00000409588 IPO13O94829 963 aaKnown RBP13.93□□□□□ -0.18
NIF3L1-205ENST00000409588 RPA3P35244 121 aaPredicted RBP13.93□□□□□ -0.18
NIF3L1-205ENST00000409588 PTGIRP43119 386 aa13.93□□□□□ -0.18
NIF3L1-205ENST00000409588 TERF1P54274 439 aa13.93□□□□□ -0.18
NIF3L1-205ENST00000409588 PRDX1Q06830 199 aaKnown RBP13.93□□□□□ -0.18
NIF3L1-205ENST00000409588 ILF2Q12905 390 aaKnown RBP13.93□□□□□ -0.18
NIF3L1-205ENST00000409588 CTBP1Q13363 440 aa13.93□□□□□ -0.18
NIF3L1-205ENST00000409588 DEFB110Q30KQ9 67 aa13.93□□□□□ -0.18
NIF3L1-205ENST00000409588 ACSBG2Q5FVE4 666 aa13.93□□□□□ -0.18
NIF3L1-205ENST00000409588 TTLL10Q6ZVT0 673 aa13.93□□□□□ -0.18
NIF3L1-205ENST00000409588 GALNT7Q86SF2 657 aa13.93□□□□□ -0.18
NIF3L1-205ENST00000409588 PDIK1LQ8N165 341 aa13.93□□□□□ -0.18
NIF3L1-205ENST00000409588 C2orf73Q8N5S3 287 aaPredicted RBP13.93□□□□□ -0.18
NIF3L1-205ENST00000409588 CLEC1AQ8NC01 280 aa13.93□□□□□ -0.18
NIF3L1-205ENST00000409588 LRRC39Q96DD0 335 aa13.93□□□□□ -0.18
NIF3L1-205ENST00000409588 TRIM55Q9BYV6 548 aa13.93□□□□□ -0.18
NIF3L1-205ENST00000409588 CUTCQ9NTM9 273 aa13.93□□□□□ -0.18
NIF3L1-205ENST00000409588 TRMT1Q9NXH9 659 aaKnown RBP13.93□□□□□ -0.18
NIF3L1-205ENST00000409588 DHCR7Q9UBM7 475 aaKnown RBP13.93□□□□□ -0.18
NIF3L1-205ENST00000409588 PTRH2Q9Y3E5 179 aaKnown RBP13.93□□□□□ -0.18
NIF3L1-205ENST00000409588 UBR5O95071 2799 aaPredicted RBP13.93□□□□□ -0.18
NIF3L1-205ENST00000409588 SPTBP11277 2137 aa13.93□□□□□ -0.18
NIF3L1-205ENST00000409588 HYKKA2RU49 373 aa13.92□□□□□ -0.18
NIF3L1-205ENST00000409588 CCDC188H7C350 402 aa13.92□□□□□ -0.18
NIF3L1-205ENST00000409588 ALPPP05187 535 aa13.92□□□□□ -0.18
NIF3L1-205ENST00000409588 MORF4L2Q15014 288 aa13.92□□□□□ -0.18
NIF3L1-205ENST00000409588 HSP90AA5PQ58FG0 334 aa13.92□□□□□ -0.18
NIF3L1-205ENST00000409588 SPANXN3Q5MJ09 141 aa13.92□□□□□ -0.18
NIF3L1-205ENST00000409588 WASHC2DQ5SRD0 308 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms