RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 RAB43Q86YS6 212 aa18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 RAB42Q8N4Z0 105 aa18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 TMEM102Q8N9M5 508 aaPredicted RBP18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 GIMAP7Q8NHV1 300 aa18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 MAGEC3Q8TD91 643 aa18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 ZUFSPQ96AP4 578 aa18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 SIGLEC10Q96LC7 697 aa18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 NUDT9Q9BW91 350 aa18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 NDOR1Q9UHB4 597 aa18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 MDC1Q14676 2089 aaKnown RBP18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 TARM1B6A8C7 271 aa18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 ZSCAN12O43309 604 aa18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 FOLR3P41439 243 aa18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 SLC1A2P43004 574 aa18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 FNTAP49354 379 aa18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 CUL1Q13616 776 aa18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 SSPNQ14714 243 aa18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 NADK2Q4G0N4 442 aa18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 DTWD1Q8N5C7 304 aa18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 OR9A1PQ8NGU1 263 aa18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 OR2Y1Q8NGV0 311 aa18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 ZNF285Q96NJ3 590 aa18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 SELENOSQ9BQE4 189 aa18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 ACAT2Q9BWD1 397 aa18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 C20orf96Q9NUD7 363 aaPredicted RBP18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 VPS9D1Q9Y2B5 631 aa18.49■□□□□ 0.55
SMARCB1-204ENST00000407422 A0A1B0GX78 115 aa18.48■□□□□ 0.55
SMARCB1-204ENST00000407422 PSIP1O75475 530 aaKnown RBP18.48■□□□□ 0.55
SMARCB1-204ENST00000407422 FKBP9O95302 570 aa18.48■□□□□ 0.55
SMARCB1-204ENST00000407422 UMODP07911 640 aa18.48■□□□□ 0.55
SMARCB1-204ENST00000407422 RAPSNQ13702 412 aa18.48■□□□□ 0.55
SMARCB1-204ENST00000407422 LONRF1Q17RB8 773 aa18.48■□□□□ 0.55
SMARCB1-204ENST00000407422 RNASEH2BQ5TBB1 312 aaKnown RBP18.48■□□□□ 0.55
SMARCB1-204ENST00000407422 FRMPD2BQ6IN97 320 aa18.48■□□□□ 0.55
SMARCB1-204ENST00000407422 PPIL6Q8IXY8 311 aa18.48■□□□□ 0.55
SMARCB1-204ENST00000407422 GRK7Q8WTQ7 553 aa18.48■□□□□ 0.55
SMARCB1-204ENST00000407422 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.48■□□□□ 0.55
SMARCB1-204ENST00000407422 DLG3Q92796 817 aa18.48■□□□□ 0.55
SMARCB1-204ENST00000407422 CUTCQ9NTM9 273 aa18.48■□□□□ 0.55
SMARCB1-204ENST00000407422 SPATA7Q9P0W8 599 aa18.48■□□□□ 0.55
SMARCB1-204ENST00000407422 KLK4Q9Y5K2 254 aa18.48■□□□□ 0.55
SMARCB1-204ENST00000407422 GOLGA6L10A0A0M3HER8 536 aa18.47■□□□□ 0.55
SMARCB1-204ENST00000407422 MASP2O00187 686 aa18.47■□□□□ 0.55
SMARCB1-204ENST00000407422 ERGP11308 486 aa18.47■□□□□ 0.55
SMARCB1-204ENST00000407422 ARSFP54793 590 aa18.47■□□□□ 0.55
SMARCB1-204ENST00000407422 RRADP55042 308 aa18.47■□□□□ 0.55
SMARCB1-204ENST00000407422 VSX2P58304 361 aaPredicted RBP18.47■□□□□ 0.55
SMARCB1-204ENST00000407422 MPP1Q00013 466 aa18.47■□□□□ 0.55
SMARCB1-204ENST00000407422 PPP1R7Q15435 360 aa18.47■□□□□ 0.55
SMARCB1-204ENST00000407422 SUSD1Q6UWL2 747 aa18.47■□□□□ 0.55
SMARCB1-204ENST00000407422 MIB2Q96AX9 1013 aa18.47■□□□□ 0.55
SMARCB1-204ENST00000407422 PKP4Q99569 1192 aa18.47■□□□□ 0.55
SMARCB1-204ENST00000407422 DDX47Q9H0S4 455 aaKnown RBP18.47■□□□□ 0.55
SMARCB1-204ENST00000407422 NUP210LQ5VU65 1888 aa18.47■□□□□ 0.55
SMARCB1-204ENST00000407422 DOCK10Q96BY6 2186 aa18.46■□□□□ 0.55
SMARCB1-204ENST00000407422 LOC105369274A0A096LPK9 316 aa18.46■□□□□ 0.55
SMARCB1-204ENST00000407422 LOC102723532A0A0G2JNH3 316 aa18.46■□□□□ 0.55
SMARCB1-204ENST00000407422 A0A0J9YVX5 310 aa18.46■□□□□ 0.55
SMARCB1-204ENST00000407422 MYO1CO00159 1063 aa18.46■□□□□ 0.55
SMARCB1-204ENST00000407422 DSCR3O14972 297 aa18.46■□□□□ 0.55
SMARCB1-204ENST00000407422 MED26O95402 600 aa18.46■□□□□ 0.55
SMARCB1-204ENST00000407422 GRM7Q14831 915 aa18.46■□□□□ 0.55
SMARCB1-204ENST00000407422 HSP90AA5PQ58FG0 334 aa18.46■□□□□ 0.55
SMARCB1-204ENST00000407422 TCTE1Q5JU00 501 aa18.46■□□□□ 0.55
SMARCB1-204ENST00000407422 WASHC2DQ5SRD0 308 aa18.46■□□□□ 0.55
SMARCB1-204ENST00000407422 PPP1R32Q7Z5V6 425 aa18.46■□□□□ 0.55
SMARCB1-204ENST00000407422 OR4N4Q8N0Y3 316 aa18.46■□□□□ 0.55
SMARCB1-204ENST00000407422 METTL27Q8N6F8 245 aaPredicted RBP18.46■□□□□ 0.55
SMARCB1-204ENST00000407422 PTERQ96BW5 349 aa18.46■□□□□ 0.55
SMARCB1-204ENST00000407422 SLC6A20Q9NP91 592 aa18.46■□□□□ 0.55
SMARCB1-204ENST00000407422 ENAMQ9NRM1 1142 aa18.46■□□□□ 0.55
SMARCB1-204ENST00000407422 P4HTMQ9NXG6 502 aa18.46■□□□□ 0.55
SMARCB1-204ENST00000407422 USP9XQ93008 2570 aaPredicted RBP18.46■□□□□ 0.55
SMARCB1-204ENST00000407422 FITM1A5D6W6 292 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 USP27XA6NNY8 438 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 CES2O00748 559 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 BANF1O75531 89 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 HAUS5O94927 633 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 CD63P08962 238 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 OR1D4P47884 311 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 TSTA3Q13630 321 aaPredicted RBP18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 COX15Q7KZN9 410 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 KCNJ9Q92806 393 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 DPH7Q9BTV6 452 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 CCDC68Q9H2F9 335 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 GPR83Q9NYM4 423 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 STOX2Q9P2F5 926 aaPredicted RBP18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 FBXO5Q9UKT4 447 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 ZNF451Q9Y4E5 1061 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 FAM169AQ9Y6X4 670 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 SHANK1Q9Y566 2161 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 UTP20O75691 2785 aaKnown RBP18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 OR2A25A4D2G3 310 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 TTLL8A6PVC2 850 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 SRPX2O60687 465 aaPredicted RBP18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 ONECUT2O95948 504 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 CATP04040 527 aaKnown RBP18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 TTLL9Q3SXZ7 439 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 DCAF10Q5QP82 559 aa18.45■□□□□ 0.54
SMARCB1-204ENST00000407422 FBXO42Q6P3S6 717 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms