RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 SUSD2Q9UGT4 822 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 RIMS3Q9UJD0 308 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 EIF3LQ9Y262 564 aaKnown RBP12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 MUC22E2RYF6 1773 aaPredicted RBP12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 DPPA5A6NC42 116 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 NCF1BA6NI72 391 aaPredicted RBP12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 CYSRT1A8MQ03 144 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 AGAP14A8MT82 685 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 NCF1CA8MVU1 366 aaPredicted RBP12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 CFAP99D6REC4 459 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 SLC16A5O15375 505 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 ZNF217O75362 1048 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 GMNNO75496 209 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 C1QL1O75973 258 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 SORBS2O94875 1100 aaKnown RBP12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 GPIP06744 558 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 ANXA5P08758 320 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 EBLN1P0CF75 366 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 MPC1LP0DKB6 136 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 NCF1P14598 390 aaPredicted RBP12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 ZNF30P17039 623 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 MAPK9P45984 424 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 ERFP50548 548 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 CCNHP51946 323 aaPredicted RBP12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 POLR2JP52435 117 aaKnown RBP12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 SLC7A2P52569 658 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 CHN2P52757 468 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 AQP4P55087 323 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 NFYCQ13952 458 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 GRB7Q14451 532 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 PDK3Q15120 406 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 LRRC36Q1X8D7 754 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 WDR45BQ5MNZ6 344 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 KIAA1324Q6UXG2 1013 aaKnown RBP12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 CYHR1Q6ZMK1 362 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 FKBP9P1Q75LS8 142 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 DSG4Q86SJ6 1040 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 MMAAQ8IVH4 418 aaKnown RBP12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 NXPE1Q8N323 547 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 FNDC5Q8NAU1 212 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 CHST14Q8NCH0 376 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 GLB1L3Q8NCI6 653 aaPredicted RBP12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 OR6K2Q8NGY2 324 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 HMGCLL1Q8TB92 370 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 EME1Q96AY2 570 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 COPS8Q99627 209 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 HEPHQ9BQS7 1158 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 SLC29A3Q9BZD2 475 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 MKRN2Q9H000 416 aaKnown RBP12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 SLC6A17Q9H1V8 727 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 RSPH9Q9H1X1 276 aaPredicted RBP12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 TUBB1Q9H4B7 451 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 GAREM1Q9H706 876 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 WWOXQ9NZC7 414 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 ACTR3BQ9P1U1 418 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 GALPQ9UBC7 116 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 IL36AQ9UHA7 158 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 TRPS1Q9UHF7 1281 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 EIF2B4Q9UI10 523 aaKnown RBP12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 PTBP2Q9UKA9 531 aaKnown RBP12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 FNDC3AQ9Y2H6 1198 aaKnown RBP12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 PCDH15Q96QU1 1955 aa12.57□□□□□ -0.4
SMARCB1-203ENST00000407082 CKAP5Q14008 2032 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 A0A087WV48 116 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 LRRC14BA6NHZ5 514 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 K7EPI3 171 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 CBFA2T3O75081 653 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 OR4F21O95013 312 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 CLDN7O95471 211 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 C8GP07360 202 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 ALPIP09923 528 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 HIST1H2AGP0C0S8 130 aaPredicted RBP12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 BPIP17213 487 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 NDUFV2P19404 249 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 TCN1P20061 433 aaPredicted RBP12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 HIST1H2ADP20671 130 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 PSMA4P25789 261 aaKnown RBP12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 ITPKBP27987 946 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 ARHGEF7Q14155 803 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 RCAN2Q14206 197 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 ARSIQ5FYB1 569 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 MTX3Q5HYI7 312 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 C6orf136Q5SQH8 315 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 CACHD1Q5VU97 1274 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 ZNF776Q68DI1 518 aaPredicted RBP12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 LCN8Q6JVE9 175 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 BRAT1Q6PJG6 821 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 RNF111Q6ZNA4 994 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 GOLGA7Q7Z5G4 137 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 GLRX5Q86SX6 157 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 TICAM1Q8IUC6 712 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 GALNT15Q8N3T1 639 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 RNF148Q8N7C7 305 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 HCAR2Q8TDS4 363 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 FOXJ1Q92949 421 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 ECHDC3Q96DC8 303 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 SIPA1Q96FS4 1042 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 HIST1H2AHQ96KK5 128 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 MRGPRX1Q96LB2 322 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 SLC30A3Q99726 388 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms