RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 CDK5RAP1Q96SZ6 601 aaKnown RBP19.32■□□□□ 0.68
CCDC47-202ENST00000403162 CLPBQ9H078 707 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 ZBP1Q9H171 429 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 TNKS2Q9H2K2 1166 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 ATP13A3Q9H7F0 1226 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 SERHLQ9NQF3 203 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 VNN3Q9NY84 501 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 ERVK-18Q9QC07 812 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 DNMT3LQ9UJW3 386 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 ITGB1BP2Q9UKP3 347 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 CEP290O15078 2479 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 A0A0U1RQS6 177 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 TMEM247A6NEH6 219 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 PER2O15055 1255 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 FTH1P02794 183 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 ZNF7P17097 686 aaPredicted RBP19.32■□□□□ 0.68
CCDC47-202ENST00000403162 GRK3P35626 688 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 NPTX1Q15818 432 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 PERM1Q5SV97 790 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 SYT6Q5T7P8 510 aaPredicted RBP19.32■□□□□ 0.68
CCDC47-202ENST00000403162 NCEH1Q6PIU2 408 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 C10orf111Q8N326 155 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 TMEM132CQ8N3T6 1108 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 PHF10Q8WUB8 498 aaKnown RBP19.32■□□□□ 0.68
CCDC47-202ENST00000403162 ZNF300Q96RE9 604 aaPredicted RBP19.32■□□□□ 0.68
CCDC47-202ENST00000403162 EGFL8Q99944 293 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 WWOXQ9NZC7 414 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 SH3BP1Q9Y3L3 701 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.31■□□□□ 0.68
CCDC47-202ENST00000403162 TOR1BO14657 336 aa19.31■□□□□ 0.68
CCDC47-202ENST00000403162 WNT9AO14904 365 aa19.31■□□□□ 0.68
CCDC47-202ENST00000403162 MITFO75030 526 aaPredicted RBP19.31■□□□□ 0.68
CCDC47-202ENST00000403162 VNN2O95498 520 aa19.31■□□□□ 0.68
CCDC47-202ENST00000403162 BCKDHAP12694 445 aa19.31■□□□□ 0.68
CCDC47-202ENST00000403162 TGM1P22735 817 aa19.31■□□□□ 0.68
CCDC47-202ENST00000403162 HMGCLP35914 325 aa19.31■□□□□ 0.68
CCDC47-202ENST00000403162 ZNF177Q13360 481 aaPredicted RBP19.31■□□□□ 0.68
CCDC47-202ENST00000403162 CES5AQ6NT32 575 aa19.31■□□□□ 0.68
CCDC47-202ENST00000403162 CHST9Q7L1S5 443 aa19.31■□□□□ 0.68
CCDC47-202ENST00000403162 P2RY8Q86VZ1 359 aa19.31■□□□□ 0.68
CCDC47-202ENST00000403162 CYP4Z1Q86W10 505 aa19.31■□□□□ 0.68
CCDC47-202ENST00000403162 ZDHHC21Q8IVQ6 265 aa19.31■□□□□ 0.68
CCDC47-202ENST00000403162 OR6Q1Q8NGQ2 317 aa19.31■□□□□ 0.68
CCDC47-202ENST00000403162 DYNC2LI1Q8TCX1 351 aa19.31■□□□□ 0.68
CCDC47-202ENST00000403162 SLC29A3Q9BZD2 475 aa19.31■□□□□ 0.68
CCDC47-202ENST00000403162 MRPS14O60783 128 aaKnown RBP19.3■□□□□ 0.68
CCDC47-202ENST00000403162 CNOT3O75175 753 aaKnown RBP19.3■□□□□ 0.68
CCDC47-202ENST00000403162 NADKO95544 446 aaPredicted RBP19.3■□□□□ 0.68
CCDC47-202ENST00000403162 CTSAP10619 480 aa19.3■□□□□ 0.68
CCDC47-202ENST00000403162 DGKAP23743 735 aa19.3■□□□□ 0.68
CCDC47-202ENST00000403162 ATP5C1P36542 298 aaKnown RBP19.3■□□□□ 0.68
CCDC47-202ENST00000403162 GDF5P43026 501 aa19.3■□□□□ 0.68
CCDC47-202ENST00000403162 PHC1P78364 1004 aa19.3■□□□□ 0.68
CCDC47-202ENST00000403162 IFITM3Q01628 133 aa19.3■□□□□ 0.68
CCDC47-202ENST00000403162 ABHD18Q0P651 414 aa19.3■□□□□ 0.68
CCDC47-202ENST00000403162 DUSP4Q13115 394 aa19.3■□□□□ 0.68
CCDC47-202ENST00000403162 C2orf15Q8WU43 125 aaKnown RBP19.3■□□□□ 0.68
CCDC47-202ENST00000403162 GLMNQ92990 594 aa19.3■□□□□ 0.68
CCDC47-202ENST00000403162 EID2BQ96D98 161 aa19.3■□□□□ 0.68
CCDC47-202ENST00000403162 CCDC97Q96F63 343 aaPredicted RBP19.3■□□□□ 0.68
CCDC47-202ENST00000403162 TMEM165Q9HC07 324 aa19.3■□□□□ 0.68
CCDC47-202ENST00000403162 DNMT3BQ9UBC3 853 aaKnown RBP19.3■□□□□ 0.68
CCDC47-202ENST00000403162 MAN1A2O60476 641 aa19.3■□□□□ 0.68
CCDC47-202ENST00000403162 PTPN6P29350 595 aa19.3■□□□□ 0.68
CCDC47-202ENST00000403162 FMO3P31513 532 aa19.3■□□□□ 0.68
CCDC47-202ENST00000403162 PBX2P40425 430 aa19.3■□□□□ 0.68
CCDC47-202ENST00000403162 EIF2B2P49770 351 aaKnown RBP19.3■□□□□ 0.68
CCDC47-202ENST00000403162 INAQ16352 499 aa19.3■□□□□ 0.68
CCDC47-202ENST00000403162 PHKG1Q16816 387 aa19.3■□□□□ 0.68
CCDC47-202ENST00000403162 AGAP7PQ5VUJ5 663 aa19.3■□□□□ 0.68
CCDC47-202ENST00000403162 KDM4DQ6B0I6 523 aa19.3■□□□□ 0.68
CCDC47-202ENST00000403162 SNX20Q7Z614 316 aa19.3■□□□□ 0.68
CCDC47-202ENST00000403162 SERPINA9Q86WD7 417 aa19.3■□□□□ 0.68
CCDC47-202ENST00000403162 LKAAEAR1Q8TD35 194 aa19.3■□□□□ 0.68
CCDC47-202ENST00000403162 ITCHQ96J02 903 aa19.3■□□□□ 0.68
CCDC47-202ENST00000403162 GPR63Q9BZJ6 419 aa19.3■□□□□ 0.68
CCDC47-202ENST00000403162 RMND5AQ9H871 391 aa19.3■□□□□ 0.68
CCDC47-202ENST00000403162 SCN3BQ9NY72 215 aa19.3■□□□□ 0.68
CCDC47-202ENST00000403162 SAMD4AQ9UPU9 718 aaKnown RBP19.3■□□□□ 0.68
CCDC47-202ENST00000403162 YBX2Q9Y2T7 364 aaKnown RBP19.3■□□□□ 0.68
CCDC47-202ENST00000403162 PMF1-BGLAPU3KQ54 211 aa19.3■□□□□ 0.68
CCDC47-202ENST00000403162 A0A1B0GVM2 712 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 AQP9O43315 295 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 FZD6O60353 706 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 CXCL14O95715 111 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 CD160O95971 181 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 BMP4P12644 408 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 FSHRP23945 695 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 GGT5P36269 586 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 MAP2K4P45985 399 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 CLK3P49761 638 aaKnown RBP19.29■□□□□ 0.68
CCDC47-202ENST00000403162 SGSHP51688 502 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 CLDN8P56748 225 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 RPS14P62263 151 aaKnown RBP19.29■□□□□ 0.68
CCDC47-202ENST00000403162 ARF5P84085 180 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 MVKQ03426 396 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 CLCA4Q14CN2 919 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 SGO1Q5FBB7 561 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 PRSS48Q7RTY5 328 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 GALNT5Q7Z7M9 940 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms