RNA–Protein interactions for RNA: ENST00000400017.6

RPGRIP1-202, Transcript of RPGR interacting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RPGRIP1, Length 3,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-202ENST00000400017 COPS4Q9BT78 406 aa13.13□□□□□ -0.31
RPGRIP1-202ENST00000400017 ACPTQ9BZG2 426 aa13.13□□□□□ -0.31
RPGRIP1-202ENST00000400017 DCSTAMPQ9H295 470 aa13.13□□□□□ -0.31
RPGRIP1-202ENST00000400017 DDX28Q9NUL7 540 aaKnown RBP13.13□□□□□ -0.31
RPGRIP1-202ENST00000400017 VPS51Q9UID3 782 aa13.13□□□□□ -0.31
RPGRIP1-202ENST00000400017 ZNF639Q9UID6 485 aa13.13□□□□□ -0.31
RPGRIP1-202ENST00000400017 OTOFQ9HC10 1997 aa13.13□□□□□ -0.31
RPGRIP1-202ENST00000400017 RALGAPA2Q2PPJ7 1873 aa13.13□□□□□ -0.31
RPGRIP1-202ENST00000400017 H7C4K7 107 aa13.13□□□□□ -0.31
RPGRIP1-202ENST00000400017 ADAM12O43184 909 aa13.13□□□□□ -0.31
RPGRIP1-202ENST00000400017 STC2O76061 302 aa13.13□□□□□ -0.31
RPGRIP1-202ENST00000400017 HMGCLP35914 325 aa13.13□□□□□ -0.31
RPGRIP1-202ENST00000400017 SLC11A1P49279 550 aa13.13□□□□□ -0.31
RPGRIP1-202ENST00000400017 CHIT1Q13231 466 aa13.13□□□□□ -0.31
RPGRIP1-202ENST00000400017 PTCHD3Q3KNS1 767 aa13.13□□□□□ -0.31
RPGRIP1-202ENST00000400017 SNX20Q7Z614 316 aa13.13□□□□□ -0.31
RPGRIP1-202ENST00000400017 B3GNT8Q7Z7M8 397 aa13.13□□□□□ -0.31
RPGRIP1-202ENST00000400017 TSPAN33Q86UF1 283 aa13.13□□□□□ -0.31
RPGRIP1-202ENST00000400017 APIPQ96GX9 242 aa13.13□□□□□ -0.31
RPGRIP1-202ENST00000400017 HSH2DQ96JZ2 352 aa13.13□□□□□ -0.31
RPGRIP1-202ENST00000400017 RPS6KA6Q9UK32 745 aa13.13□□□□□ -0.31
RPGRIP1-202ENST00000400017 NYNRINQ9P2P1 1898 aaKnown RBP13.13□□□□□ -0.31
RPGRIP1-202ENST00000400017 MGAT4DA6NG13 374 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 KLK8O60259 260 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 PBLDP30039 288 aaPredicted RBP13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 XKR6Q5GH73 641 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 TAS1R1Q7RTX1 841 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 HOMEZQ8IX15 550 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 FAR1Q8WVX9 515 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 PROX1Q92786 737 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 FATE1Q969F0 183 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 ISG20Q96AZ6 181 aaKnown RBP13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 RHBDF1Q96CC6 855 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 CHCHD6Q9BRQ6 235 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 IL26Q9NPH9 171 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 VNN3Q9NY84 501 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 OARD1Q9Y530 152 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 BRCA1P38398 1863 aaKnown RBP13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 SEPT4O43236 478 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 SMAD6O43541 496 aaKnown RBP13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 SULT1C4O75897 302 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 EOMESO95936 686 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 EBLN1P0CF75 366 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 CKBP12277 381 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 PRIM2P49643 509 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 ABHD18Q0P651 414 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 ABRQ12979 859 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 GTF2IRD2BQ6EKJ0 949 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 GTF2IRD2Q86UP8 949 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 CLECL1Q8IZS7 167 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 DBF4BQ8NFT6 615 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 CAPSLQ8WWF8 208 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 TADA1Q96BN2 335 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 CDK5RAP1Q96SZ6 601 aaKnown RBP13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 THUMPD1Q9NXG2 353 aaKnown RBP13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 SPASTQ9UBP0 616 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 GPC6Q9Y625 555 aaPredicted RBP13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 MAGEB17A8MXT2 336 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 CCDC159P0C7I6 412 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 BMP4P12644 408 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 ITIH1P19827 911 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 TNFRSF1BP20333 461 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 GABARAPL2P60520 117 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 CRHR2Q13324 411 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 BTG3Q14201 252 aaPredicted RBP13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 POM121L1PQ3SYA9 428 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 INO80DQ53TQ3 878 aaPredicted RBP13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 CYP2U1Q7Z449 544 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 RNF180Q86T96 592 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 MSRB3Q8IXL7 192 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 MAL2Q969L2 176 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 C1QTNF3Q9BXJ4 246 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 TSC2P49815 1807 aa13.12□□□□□ -0.31
RPGRIP1-202ENST00000400017 CCNDBP1O95273 360 aa13.11□□□□□ -0.31
RPGRIP1-202ENST00000400017 ATF6P18850 670 aa13.11□□□□□ -0.31
RPGRIP1-202ENST00000400017 SOAT1P35610 550 aa13.11□□□□□ -0.31
RPGRIP1-202ENST00000400017 TUFMP49411 452 aaKnown RBP13.11□□□□□ -0.31
RPGRIP1-202ENST00000400017 NKX2-5P52952 324 aaPredicted RBP13.11□□□□□ -0.31
RPGRIP1-202ENST00000400017 CPZQ66K79 652 aa13.11□□□□□ -0.31
RPGRIP1-202ENST00000400017 ATG9BQ674R7 924 aa13.11□□□□□ -0.31
RPGRIP1-202ENST00000400017 SZRD1Q7Z422 152 aa13.11□□□□□ -0.31
RPGRIP1-202ENST00000400017 GPR149Q86SP6 731 aa13.11□□□□□ -0.31
RPGRIP1-202ENST00000400017 ANKRD13BQ86YJ7 626 aa13.11□□□□□ -0.31
RPGRIP1-202ENST00000400017 TAGAPQ8N103 731 aa13.11□□□□□ -0.31
RPGRIP1-202ENST00000400017 PCSK9Q8NBP7 692 aaKnown RBP13.11□□□□□ -0.31
RPGRIP1-202ENST00000400017 VPS37AQ8NEZ2 397 aa13.11□□□□□ -0.31
RPGRIP1-202ENST00000400017 WBP2Q969T9 261 aa13.11□□□□□ -0.31
RPGRIP1-202ENST00000400017 C2orf49Q9BVC5 232 aaPredicted RBP13.11□□□□□ -0.31
RPGRIP1-202ENST00000400017 KCNH6Q9H252 994 aa13.11□□□□□ -0.31
RPGRIP1-202ENST00000400017 CLMPQ9H6B4 373 aa13.11□□□□□ -0.31
RPGRIP1-202ENST00000400017 ATP13A3Q9H7F0 1226 aa13.11□□□□□ -0.31
RPGRIP1-202ENST00000400017 RRAGCQ9HB90 399 aa13.11□□□□□ -0.31
RPGRIP1-202ENST00000400017 ANKRD28O15084 1053 aa13.11□□□□□ -0.31
RPGRIP1-202ENST00000400017 GTF2E2P29084 291 aaKnown RBP13.11□□□□□ -0.31
RPGRIP1-202ENST00000400017 DNAJA1P31689 397 aaKnown RBP13.11□□□□□ -0.31
RPGRIP1-202ENST00000400017 HNF1BP35680 557 aa13.11□□□□□ -0.31
RPGRIP1-202ENST00000400017 SPAM1P38567 509 aa13.11□□□□□ -0.31
RPGRIP1-202ENST00000400017 RPP38P78345 283 aaKnown RBP13.11□□□□□ -0.31
RPGRIP1-202ENST00000400017 MADCAM1Q13477 382 aa13.11□□□□□ -0.31
RPGRIP1-202ENST00000400017 NCEH1Q6PIU2 408 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms