RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 SGPP1Q9BX95 441 aa17.04■□□□□ 0.32
CTNS-203ENST00000399306 PDE7BQ9NP56 450 aa17.04■□□□□ 0.32
CTNS-203ENST00000399306 ASCL3Q9NQ33 180 aa17.04■□□□□ 0.32
CTNS-203ENST00000399306 RRAGDQ9NQL2 400 aaPredicted RBP17.04■□□□□ 0.32
CTNS-203ENST00000399306 CCDC177Q9NQR7 707 aaPredicted RBP17.04■□□□□ 0.32
CTNS-203ENST00000399306 ENAMQ9NRM1 1142 aa17.04■□□□□ 0.32
CTNS-203ENST00000399306 THSD1Q9NS62 852 aa17.04■□□□□ 0.32
CTNS-203ENST00000399306 IGSF5Q9NSI5 407 aa17.04■□□□□ 0.32
CTNS-203ENST00000399306 EURLQ9NYK6 297 aa17.04■□□□□ 0.32
CTNS-203ENST00000399306 AKAP13Q12802 2813 aa17.04■□□□□ 0.32
CTNS-203ENST00000399306 ACACAQ13085 2346 aa17.03■□□□□ 0.32
CTNS-203ENST00000399306 NPEPPSL1A6NEC2 478 aa17.03■□□□□ 0.32
CTNS-203ENST00000399306 SLC9B1P1A6NJY1 282 aa17.03■□□□□ 0.32
CTNS-203ENST00000399306 EFCAB7A8K855 629 aa17.03■□□□□ 0.32
CTNS-203ENST00000399306 SYCE1LA8MT33 242 aa17.03■□□□□ 0.32
CTNS-203ENST00000399306 IPO13O94829 963 aaKnown RBP17.03■□□□□ 0.32
CTNS-203ENST00000399306 ST6GAL1P15907 406 aa17.03■□□□□ 0.32
CTNS-203ENST00000399306 CMPK1P30085 196 aa17.03■□□□□ 0.32
CTNS-203ENST00000399306 RPA3P35244 121 aaPredicted RBP17.03■□□□□ 0.32
CTNS-203ENST00000399306 PRDX1Q06830 199 aaKnown RBP17.03■□□□□ 0.32
CTNS-203ENST00000399306 FASTKQ14296 549 aaKnown RBP17.03■□□□□ 0.32
CTNS-203ENST00000399306 TGFBIQ15582 683 aa17.03■□□□□ 0.32
CTNS-203ENST00000399306 SF1Q15637 639 aaKnown RBP17.03■□□□□ 0.32
CTNS-203ENST00000399306 CEACAM20Q6UY09 585 aa17.03■□□□□ 0.32
CTNS-203ENST00000399306 FRA10AC1Q70Z53 315 aa17.03■□□□□ 0.32
CTNS-203ENST00000399306 GPSM1Q86YR5 675 aa17.03■□□□□ 0.32
CTNS-203ENST00000399306 SPNS2Q8IVW8 549 aa17.03■□□□□ 0.32
CTNS-203ENST00000399306 C19orf47Q8N9M1 422 aaKnown RBP17.03■□□□□ 0.32
CTNS-203ENST00000399306 OR2L3Q8NG85 312 aa17.03■□□□□ 0.32
CTNS-203ENST00000399306 UTP6Q9NYH9 597 aaKnown RBP17.03■□□□□ 0.32
CTNS-203ENST00000399306 IKZF3Q9UKT9 509 aa17.03■□□□□ 0.32
CTNS-203ENST00000399306 AK5Q9Y6K8 562 aa17.03■□□□□ 0.32
CTNS-203ENST00000399306 TPRP12270 2363 aaKnown RBP17.03■□□□□ 0.32
CTNS-203ENST00000399306 AHCTF1Q8WYP5 2266 aa17.03■□□□□ 0.32
CTNS-203ENST00000399306 KERAO60938 352 aa17.02■□□□□ 0.32
CTNS-203ENST00000399306 RFPL1O75677 317 aa17.02■□□□□ 0.32
CTNS-203ENST00000399306 TNFSF15O95150 251 aa17.02■□□□□ 0.32
CTNS-203ENST00000399306 SHBGP04278 402 aa17.02■□□□□ 0.32
CTNS-203ENST00000399306 CAPNS1P04632 268 aa17.02■□□□□ 0.32
CTNS-203ENST00000399306 FGF5P12034 268 aa17.02■□□□□ 0.32
CTNS-203ENST00000399306 CCL4P13236 92 aa17.02■□□□□ 0.32
CTNS-203ENST00000399306 TFEBP19484 476 aa17.02■□□□□ 0.32
CTNS-203ENST00000399306 GGT5P36269 586 aa17.02■□□□□ 0.32
CTNS-203ENST00000399306 SEPHS1P49903 392 aa17.02■□□□□ 0.32
CTNS-203ENST00000399306 DLG1Q12959 904 aa17.02■□□□□ 0.32
CTNS-203ENST00000399306 DCAF12Q5T6F0 453 aa17.02■□□□□ 0.32
CTNS-203ENST00000399306 SULT1C3Q6IMI6 304 aa17.02■□□□□ 0.32
CTNS-203ENST00000399306 CAPN13Q6MZZ7 669 aaPredicted RBP17.02■□□□□ 0.32
CTNS-203ENST00000399306 PDPRQ8NCN5 879 aa17.02■□□□□ 0.32
CTNS-203ENST00000399306 MZB1Q8WU39 189 aa17.02■□□□□ 0.32
CTNS-203ENST00000399306 HNRNPLLQ8WVV9 542 aaKnown RBP17.02■□□□□ 0.32
CTNS-203ENST00000399306 PTERQ96BW5 349 aa17.02■□□□□ 0.32
CTNS-203ENST00000399306 GPR78Q96P69 363 aa17.02■□□□□ 0.32
CTNS-203ENST00000399306 MIPEPQ99797 713 aa17.02■□□□□ 0.32
CTNS-203ENST00000399306 HAUS8Q9BT25 410 aa17.02■□□□□ 0.32
CTNS-203ENST00000399306 CCDC86Q9H6F5 360 aaKnown RBP17.02■□□□□ 0.32
CTNS-203ENST00000399306 FANCEQ9HB96 536 aa17.02■□□□□ 0.32
CTNS-203ENST00000399306 OCIAD1Q9NX40 245 aa17.02■□□□□ 0.32
CTNS-203ENST00000399306 SLC39A1Q9NY26 324 aa17.02■□□□□ 0.32
CTNS-203ENST00000399306 PISDQ9UG56 409 aa17.02■□□□□ 0.32
CTNS-203ENST00000399306 CIDEBQ9UHD4 219 aa17.02■□□□□ 0.32
CTNS-203ENST00000399306 CHD8Q9HCK8 2581 aa17.02■□□□□ 0.31
CTNS-203ENST00000399306 ACACBO00763 2458 aa17.01■□□□□ 0.31
CTNS-203ENST00000399306 KRT87PA6NCN2 255 aa17.01■□□□□ 0.31
CTNS-203ENST00000399306 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.01■□□□□ 0.31
CTNS-203ENST00000399306 POLR1CO15160 346 aaPredicted RBP17.01■□□□□ 0.31
CTNS-203ENST00000399306 CTIFO43310 598 aaKnown RBP17.01■□□□□ 0.31
CTNS-203ENST00000399306 BRINP1O60477 761 aa17.01■□□□□ 0.31
CTNS-203ENST00000399306 RBP1P09455 135 aa17.01■□□□□ 0.31
CTNS-203ENST00000399306 GRIA3P42263 894 aa17.01■□□□□ 0.31
CTNS-203ENST00000399306 TBPL1P62380 186 aa17.01■□□□□ 0.31
CTNS-203ENST00000399306 NAA30Q147X3 362 aaPredicted RBP17.01■□□□□ 0.31
CTNS-203ENST00000399306 TBC1D25Q3MII6 688 aa17.01■□□□□ 0.31
CTNS-203ENST00000399306 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.01■□□□□ 0.31
CTNS-203ENST00000399306 ZC3H12BQ5HYM0 836 aaKnown RBP17.01■□□□□ 0.31
CTNS-203ENST00000399306 ICE2Q659A1 982 aa17.01■□□□□ 0.31
CTNS-203ENST00000399306 METTL2BQ6P1Q9 378 aaKnown RBP17.01■□□□□ 0.31
CTNS-203ENST00000399306 FIGLAQ6QHK4 219 aa17.01■□□□□ 0.31
CTNS-203ENST00000399306 LCTLQ6UWM7 567 aa17.01■□□□□ 0.31
CTNS-203ENST00000399306 UNQ6494/PRO21346Q6UXR6 183 aa17.01■□□□□ 0.31
CTNS-203ENST00000399306 FAM129CQ86XR2 697 aa17.01■□□□□ 0.31
CTNS-203ENST00000399306 KCTD4Q8WVF5 259 aa17.01■□□□□ 0.31
CTNS-203ENST00000399306 RHBDF1Q96CC6 855 aa17.01■□□□□ 0.31
CTNS-203ENST00000399306 NXNL1Q96CM4 212 aa17.01■□□□□ 0.31
CTNS-203ENST00000399306 PPM1MQ96MI6 270 aa17.01■□□□□ 0.31
CTNS-203ENST00000399306 TSNARE1Q96NA8 513 aa17.01■□□□□ 0.31
CTNS-203ENST00000399306 ATOH8Q96SQ7 321 aa17.01■□□□□ 0.31
CTNS-203ENST00000399306 VPS11Q9H270 941 aa17.01■□□□□ 0.31
CTNS-203ENST00000399306 CNOT10Q9H9A5 744 aaKnown RBP17.01■□□□□ 0.31
CTNS-203ENST00000399306 FGF21Q9NSA1 209 aa17.01■□□□□ 0.31
CTNS-203ENST00000399306 SOHLH2Q9NX45 425 aa17.01■□□□□ 0.31
CTNS-203ENST00000399306 NUDT4Q9NZJ9 180 aa17.01■□□□□ 0.31
CTNS-203ENST00000399306 RNF112Q9ULX5 631 aa17.01■□□□□ 0.31
CTNS-203ENST00000399306 TMCO1Q9UM00 188 aa17.01■□□□□ 0.31
CTNS-203ENST00000399306 APC2O95996 2303 aa17.01■□□□□ 0.31
CTNS-203ENST00000399306 OR2A25A4D2G3 310 aa17■□□□□ 0.31
CTNS-203ENST00000399306 GSTA1P08263 222 aa17■□□□□ 0.31
CTNS-203ENST00000399306 ITIH1P19827 911 aa17■□□□□ 0.31
CTNS-203ENST00000399306 ETV5P41161 510 aa17■□□□□ 0.31
CTNS-203ENST00000399306 NAE1Q13564 534 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms