RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 SIRT6Q8N6T7 355 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 OR5K2Q8NHB8 316 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 PSMF1Q92530 271 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 RNF25Q96BH1 459 aaPredicted RBP8.99□□□□□ -0.97
NEDD9-203ENST00000397378 GPR137Q96N19 417 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 ZNF285Q96NJ3 590 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 FICDQ9BVA6 458 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 NAT10Q9H0A0 1025 aaKnown RBP8.99□□□□□ -0.97
NEDD9-203ENST00000397378 TSPAN10Q9H1Z9 355 aaPredicted RBP8.99□□□□□ -0.97
NEDD9-203ENST00000397378 SOX17Q9H6I2 414 aaPredicted RBP8.99□□□□□ -0.97
NEDD9-203ENST00000397378 ZNF160Q9HCG1 818 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 CUTCQ9NTM9 273 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 ZNF358Q9NW07 568 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 LRFN1Q9P244 771 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 SAE1Q9UBE0 346 aaPredicted RBP8.99□□□□□ -0.97
NEDD9-203ENST00000397378 CTSFQ9UBX1 484 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 ADAM21Q9UKJ8 722 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 TRHDEQ9UKU6 1024 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 ASF1AQ9Y294 204 aa8.99□□□□□ -0.97
NEDD9-203ENST00000397378 MRPS2Q9Y399 296 aaKnown RBP8.99□□□□□ -0.97
NEDD9-203ENST00000397378 AKAP6Q13023 2319 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 A0A1W2PQ72 361 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 E9PLN8 166 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 MAP2K7O14733 419 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 KDM1AO60341 852 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 ANXA9O76027 345 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 CRTAMO95727 393 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 AP2A1O95782 977 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 PRR35P0CG20 571 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 MYBL2P10244 700 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 ACPPP15309 386 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 PECAM1P16284 738 aaPredicted RBP8.98□□□□□ -0.97
NEDD9-203ENST00000397378 MAGP20916 626 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 ACRV1P26436 265 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 MSX1P28360 303 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 ADRA1AP35348 466 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 ARHGAP25P42331 645 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 CDKN2BP42772 138 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 ZNF140P52738 457 aaPredicted RBP8.98□□□□□ -0.97
NEDD9-203ENST00000397378 CACNG1Q06432 222 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 FAM214AQ32MH5 1076 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 ODF2Q5BJF6 829 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 ZC3H12BQ5HYM0 836 aaKnown RBP8.98□□□□□ -0.97
NEDD9-203ENST00000397378 MFSD7Q6UXD7 560 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 NLRP9Q7RTR0 991 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 CAMKMTQ7Z624 323 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 PHC2Q8IXK0 858 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 OR13C4Q8NGS5 318 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 BRIX1Q8TDN6 353 aaKnown RBP8.98□□□□□ -0.97
NEDD9-203ENST00000397378 THAP3Q8WTV1 239 aaPredicted RBP8.98□□□□□ -0.97
NEDD9-203ENST00000397378 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.98□□□□□ -0.97
NEDD9-203ENST00000397378 IQCDQ96DY2 449 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 DMRTA2Q96SC8 542 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 VKORC1Q9BQB6 163 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 GPATCH1Q9BRR8 931 aaKnown RBP8.98□□□□□ -0.97
NEDD9-203ENST00000397378 CRB3Q9BUF7 120 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 PACSIN1Q9BY11 444 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 UCK2Q9BZX2 261 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 RNF32Q9H0A6 362 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 CLEC4MQ9H2X3 399 aaPredicted RBP8.98□□□□□ -0.97
NEDD9-203ENST00000397378 FAM96AQ9H5X1 160 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 SLC24A3Q9HC58 644 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 LUC7LQ9NQ29 371 aaKnown RBP8.98□□□□□ -0.97
NEDD9-203ENST00000397378 DDX56Q9NY93 547 aaKnown RBP8.98□□□□□ -0.97
NEDD9-203ENST00000397378 RSPH14Q9UHP6 348 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 CAPN11Q9UMQ6 739 aa8.98□□□□□ -0.97
NEDD9-203ENST00000397378 FAM237BA0A1B0GVD1 139 aa8.97□□□□□ -0.97
NEDD9-203ENST00000397378 FITM1A5D6W6 292 aa8.97□□□□□ -0.97
NEDD9-203ENST00000397378 HACD1B0YJ81 288 aa8.97□□□□□ -0.97
NEDD9-203ENST00000397378 INAFM1C9JVW0 142 aa8.97□□□□□ -0.97
NEDD9-203ENST00000397378 NPIPA5E9PKD4 350 aa8.97□□□□□ -0.97
NEDD9-203ENST00000397378 H7C0S8 307 aa8.97□□□□□ -0.97
NEDD9-203ENST00000397378 QSOX1O00391 747 aa8.97□□□□□ -0.97
NEDD9-203ENST00000397378 PRRG2O14669 202 aa8.97□□□□□ -0.97
NEDD9-203ENST00000397378 ZNHIT1O43257 154 aa8.97□□□□□ -0.97
NEDD9-203ENST00000397378 CST8O60676 142 aa8.97□□□□□ -0.97
NEDD9-203ENST00000397378 CTAG2O75638 210 aa8.97□□□□□ -0.97
NEDD9-203ENST00000397378 AP2A2O94973 939 aa8.97□□□□□ -0.97
NEDD9-203ENST00000397378 BMP10O95393 424 aa8.97□□□□□ -0.97
NEDD9-203ENST00000397378 TSPAN12O95859 305 aa8.97□□□□□ -0.97
NEDD9-203ENST00000397378 SERPINA7P05543 415 aa8.97□□□□□ -0.97
NEDD9-203ENST00000397378 HOXD4P09016 255 aaPredicted RBP8.97□□□□□ -0.97
NEDD9-203ENST00000397378 ZGLP1P0C6A0 271 aa8.97□□□□□ -0.97
NEDD9-203ENST00000397378 TMEM253P0C7T8 217 aa8.97□□□□□ -0.97
NEDD9-203ENST00000397378 OR1D4P47884 311 aa8.97□□□□□ -0.97
NEDD9-203ENST00000397378 CDKN1CP49918 316 aaPredicted RBP8.97□□□□□ -0.97
NEDD9-203ENST00000397378 PLOD1Q02809 727 aaPredicted RBP8.97□□□□□ -0.97
NEDD9-203ENST00000397378 OCA2Q04671 838 aa8.97□□□□□ -0.97
NEDD9-203ENST00000397378 TYRO3Q06418 890 aa8.97□□□□□ -0.97
NEDD9-203ENST00000397378 KLC1Q07866 573 aa8.97□□□□□ -0.97
NEDD9-203ENST00000397378 SLC18A3Q16572 532 aa8.97□□□□□ -0.97
NEDD9-203ENST00000397378 KRTCAP3Q53RY4 240 aa8.97□□□□□ -0.97
NEDD9-203ENST00000397378 RIPOR1Q6ZS17 1223 aa8.97□□□□□ -0.97
NEDD9-203ENST00000397378 CEP128Q6ZU80 1094 aa8.97□□□□□ -0.97
NEDD9-203ENST00000397378 NDUFAF7Q7L592 441 aa8.97□□□□□ -0.97
NEDD9-203ENST00000397378 SERPINA9Q86WD7 417 aa8.97□□□□□ -0.97
NEDD9-203ENST00000397378 DOLPP1Q86YN1 238 aa8.97□□□□□ -0.97
NEDD9-203ENST00000397378 CLDN19Q8N6F1 224 aa8.97□□□□□ -0.97
NEDD9-203ENST00000397378 TTC29Q8NA56 475 aaPredicted RBP8.97□□□□□ -0.97
NEDD9-203ENST00000397378 GOT1L1Q8NHS2 421 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms