RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 ZCCHC18P0CG32 403 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 AMD1P17707 334 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 FASP25445 335 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 S100A3P33764 101 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 GRIA2P42262 883 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 CHN2P52757 468 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 PNLIPRP1P54315 467 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 PLOD1Q02809 727 aaPredicted RBP14.5□□□□□ -0.09
CBX3-202ENST00000396386 PCDH1Q08174 1060 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 CYP4F3Q08477 520 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 PIP5KL1Q5T9C9 394 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 CRTC3Q6UUV7 619 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 DNAJC14Q6Y2X3 702 aaPredicted RBP14.5□□□□□ -0.09
CBX3-202ENST00000396386 ST13P4Q8IZP2 240 aaPredicted RBP14.5□□□□□ -0.09
CBX3-202ENST00000396386 WDR20Q8TBZ3 569 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 TESCQ96BS2 214 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 APIPQ96GX9 242 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 APOLD1Q96LR9 279 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 NSMCE2Q96MF7 247 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 TSSK3Q96PN8 268 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 OR4K3Q96R72 315 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 SH3GL1Q99961 368 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 KXD1Q9BQD3 176 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 PLA2G2FQ9BZM2 168 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 PIF1Q9H611 641 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 RMND5AQ9H871 391 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 AGPAT4Q9NRZ5 378 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 GPRC5BQ9NZH0 403 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 CIDEBQ9UHD4 219 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 MSRAQ9UJ68 235 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 C17orf113A0A1B0GUU1 675 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 H0YIV9 168 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 HSD3B1P14060 373 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 ZNF8P17098 575 aaPredicted RBP14.5□□□□□ -0.09
CBX3-202ENST00000396386 PSMC3P17980 439 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 HSD3B2P26439 372 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 SOX11P35716 441 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 MAP7Q14244 749 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 OR52E8Q6IFG1 317 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 ANKRD54Q6NXT1 300 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 SYCE2Q6PIF2 218 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 UGT2A3Q6UWM9 527 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 ADAMTSL4Q6UY14 1074 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 MSANTD1Q6ZTZ1 278 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 TRPV3Q8NET8 790 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 TNIP2Q8NFZ5 429 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 MRPL38Q96DV4 380 aaKnown RBP14.5□□□□□ -0.09
CBX3-202ENST00000396386 ERLEC1Q96DZ1 483 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 HIC2Q96JB3 615 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 ZNF597Q96LX8 424 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 CCDC115Q96NT0 180 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 CIB1Q99828 191 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 RPF2Q9H7B2 306 aaKnown RBP14.5□□□□□ -0.09
CBX3-202ENST00000396386 HCN2Q9UL51 889 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 GPR34Q9UPC5 381 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 MAN2B2Q9Y2E5 1009 aa14.5□□□□□ -0.09
CBX3-202ENST00000396386 CHD9Q3L8U1 2897 aa14.49□□□□□ -0.09
CBX3-202ENST00000396386 A0A096LPI6 279 aa14.49□□□□□ -0.09
CBX3-202ENST00000396386 LINC01565O15544 149 aa14.49□□□□□ -0.09
CBX3-202ENST00000396386 TPST1O60507 370 aa14.49□□□□□ -0.09
CBX3-202ENST00000396386 ERN1O75460 977 aaKnown RBP14.49□□□□□ -0.09
CBX3-202ENST00000396386 GMNNO75496 209 aa14.49□□□□□ -0.09
CBX3-202ENST00000396386 POLE2P56282 527 aa14.49□□□□□ -0.09
CBX3-202ENST00000396386 TBPL1P62380 186 aa14.49□□□□□ -0.09
CBX3-202ENST00000396386 DDX39BQ13838 428 aaKnown RBP14.49□□□□□ -0.09
CBX3-202ENST00000396386 RAB30Q15771 203 aa14.49□□□□□ -0.09
CBX3-202ENST00000396386 NRF1Q16656 503 aa14.49□□□□□ -0.09
CBX3-202ENST00000396386 C6orf52Q5T4I8 152 aa14.49□□□□□ -0.09
CBX3-202ENST00000396386 GLYATQ6IB77 296 aa14.49□□□□□ -0.09
CBX3-202ENST00000396386 CAPN13Q6MZZ7 669 aaPredicted RBP14.49□□□□□ -0.09
CBX3-202ENST00000396386 NOXRED1Q6NXP6 359 aa14.49□□□□□ -0.09
CBX3-202ENST00000396386 TMEM184AQ6ZMB5 413 aa14.49□□□□□ -0.09
CBX3-202ENST00000396386 NUDT18Q6ZVK8 323 aa14.49□□□□□ -0.09
CBX3-202ENST00000396386 TRMT11Q7Z4G4 463 aaKnown RBP14.49□□□□□ -0.09
CBX3-202ENST00000396386 ZNF547Q8IVP9 402 aa14.49□□□□□ -0.09
CBX3-202ENST00000396386 PACRGLQ8N7B6 248 aa14.49□□□□□ -0.09
CBX3-202ENST00000396386 PAPD5Q8NDF8 572 aaKnown RBP14.49□□□□□ -0.09
CBX3-202ENST00000396386 OR2T12Q8NG77 320 aa14.49□□□□□ -0.09
CBX3-202ENST00000396386 MIEF2Q96C03 454 aa14.49□□□□□ -0.09
CBX3-202ENST00000396386 CHFRQ96EP1 664 aa14.49□□□□□ -0.09
CBX3-202ENST00000396386 ITCHQ96J02 903 aa14.49□□□□□ -0.09
CBX3-202ENST00000396386 MYADMQ96S97 322 aa14.49□□□□□ -0.09
CBX3-202ENST00000396386 KCNH6Q9H252 994 aa14.49□□□□□ -0.09
CBX3-202ENST00000396386 BRF2Q9HAW0 419 aa14.49□□□□□ -0.09
CBX3-202ENST00000396386 SGK2Q9HBY8 427 aa14.49□□□□□ -0.09
CBX3-202ENST00000396386 SPATA6Q9NWH7 488 aaPredicted RBP14.49□□□□□ -0.09
CBX3-202ENST00000396386 PCDHGA11Q9Y5H2 935 aa14.49□□□□□ -0.09
CBX3-202ENST00000396386 AK5Q9Y6K8 562 aa14.49□□□□□ -0.09
CBX3-202ENST00000396386 STON1Q9Y6Q2 735 aa14.49□□□□□ -0.09
CBX3-202ENST00000396386 LAMA2P24043 3122 aaKnown RBP14.49□□□□□ -0.09
CBX3-202ENST00000396386 TRBV5-3A0A0A0MS03 114 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 SAC3D1A6NKF1 404 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 POP7O75817 140 aaKnown RBP14.48□□□□□ -0.09
CBX3-202ENST00000396386 ANXA6P08133 673 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 GGT1P19440 569 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 TACR1P25103 407 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 DPY19L1Q2PZI1 675 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 LRIF1Q5T3J3 769 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 XKR5Q6UX68 686 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 SYT12Q8IV01 421 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms