RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 JRKO75564 520 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 IRF1P10914 325 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 EPB42P16452 691 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 CLK3P49761 638 aaKnown RBP17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 SIM2Q14190 667 aaPredicted RBP17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 PERM1Q5SV97 790 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 GPRC6AQ5T6X5 926 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 CEP68Q76N32 757 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 TMEM132CQ8N3T6 1108 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 DNAJB8Q8NHS0 232 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 PIH1D2Q8WWB5 315 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 RORBQ92753 470 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 PLD4Q96BZ4 506 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 YIPF6Q96EC8 236 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 BCL7BQ9BQE9 202 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 GABARAPL1Q9H0R8 117 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 RIBC2Q9H4K1 309 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 WNT9AO14904 365 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 SLC22A1O15245 554 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 CYP4B1P13584 511 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 JUNDP17535 347 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 ALDH4A1P30038 563 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 S100A3P33764 101 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 MASP1P48740 699 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 DAPP51397 102 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 CLDN8P56748 225 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 RPS3AP61247 264 aaKnown RBP17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 RHOAP61586 193 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 SLC35A2P78381 396 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 IFITM3Q01628 133 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 CD300CQ08708 224 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 SLC14A1Q13336 389 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 NPTX1Q15818 432 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 SNX29P2Q8IUI4 249 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 SETD9Q8NE22 299 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 MYO19Q96H55 970 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 ALOXE3Q9BYJ1 711 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 DUSP21Q9H596 190 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 ABCG2Q9UNQ0 655 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 ZNF840PA6NDX5 716 aa17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 PDYNP01213 254 aa17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 EPORP19235 508 aa17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 MAGEA10P43363 369 aaPredicted RBP17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 LSM3P62310 102 aaKnown RBP17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 ABHD18Q0P651 414 aa17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 NFATC2Q13469 925 aa17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 GBX1Q14549 363 aa17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 HECTD3Q5T447 861 aa17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 ADGRF1Q5T601 910 aa17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 PRSS55Q6UWB4 352 aaPredicted RBP17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 SNX20Q7Z614 316 aa17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 S100ZQ8WXG8 99 aa17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 ZNF689Q96CS4 500 aaPredicted RBP17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 ITPKCQ96DU7 683 aa17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 TMEM175Q9BSA9 504 aa17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 SLC29A3Q9BZD2 475 aa17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 PARVBQ9HBI1 364 aa17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 GPRC5BQ9NZH0 403 aa17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 PPT2Q9UMR5 302 aa17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 PMF1-BGLAPU3KQ54 211 aa17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 TMEM247A6NEH6 219 aa17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 PGLSO95336 258 aa17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 ALDH7A1P49419 539 aaKnown RBP17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 GTF2H3Q13889 308 aa17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 CPSF6Q16630 551 aaKnown RBP eCLIP17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 ARMC12Q5T9G4 340 aa17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 CAPN13Q6MZZ7 669 aaPredicted RBP17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 MFSD4AQ8N468 514 aa17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 TBC1D20Q96BZ9 403 aa17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 RHNO1Q9BSD3 238 aa17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 ATP13A3Q9H7F0 1226 aa17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 NECTIN3Q9NQS3 549 aa17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 NUP214P35658 2090 aaPredicted RBP17.86■□□□□ 0.45
PCDHA1-202ENST00000394633 M0R3G1 203 aa17.85■□□□□ 0.45
PCDHA1-202ENST00000394633 ADAM12O43184 909 aa17.85■□□□□ 0.45
PCDHA1-202ENST00000394633 CLDN9O95484 217 aa17.85■□□□□ 0.45
PCDHA1-202ENST00000394633 ZNF682O95780 498 aa17.85■□□□□ 0.45
PCDHA1-202ENST00000394633 C1QCP02747 245 aa17.85■□□□□ 0.45
PCDHA1-202ENST00000394633 HOXB6P17509 224 aaKnown RBP17.85■□□□□ 0.45
PCDHA1-202ENST00000394633 TACR1P25103 407 aa17.85■□□□□ 0.45
PCDHA1-202ENST00000394633 ACRV1P26436 265 aa17.85■□□□□ 0.45
PCDHA1-202ENST00000394633 VBP1P61758 197 aa17.85■□□□□ 0.45
PCDHA1-202ENST00000394633 IL1RL1Q01638 556 aa17.85■□□□□ 0.45
PCDHA1-202ENST00000394633 SMARCB1Q12824 385 aa17.85■□□□□ 0.45
PCDHA1-202ENST00000394633 ARHGEF7Q14155 803 aa17.85■□□□□ 0.45
PCDHA1-202ENST00000394633 LINC00299Q6ZSB3 139 aa17.85■□□□□ 0.45
PCDHA1-202ENST00000394633 NCCRP1Q6ZVX7 275 aaPredicted RBP17.85■□□□□ 0.45
PCDHA1-202ENST00000394633 OR6K2Q8NGY2 324 aa17.85■□□□□ 0.45
PCDHA1-202ENST00000394633 GLMNQ92990 594 aa17.85■□□□□ 0.45
PCDHA1-202ENST00000394633 ZNF641Q96N77 438 aaPredicted RBP17.85■□□□□ 0.45
PCDHA1-202ENST00000394633 TSSK3Q96PN8 268 aa17.85■□□□□ 0.45
PCDHA1-202ENST00000394633 ZNF300Q96RE9 604 aaPredicted RBP17.85■□□□□ 0.45
PCDHA1-202ENST00000394633 RDH14Q9HBH5 336 aa17.85■□□□□ 0.45
PCDHA1-202ENST00000394633 IL26Q9NPH9 171 aa17.85■□□□□ 0.45
PCDHA1-202ENST00000394633 DNMT3BQ9UBC3 853 aaKnown RBP17.85■□□□□ 0.45
PCDHA1-202ENST00000394633 TPRKBQ9Y3C4 175 aa17.85■□□□□ 0.45
PCDHA1-202ENST00000394633 ANAPC1Q9H1A4 1944 aa17.85■□□□□ 0.45
PCDHA1-202ENST00000394633 PLXNB3Q9ULL4 1909 aa17.85■□□□□ 0.45
PCDHA1-202ENST00000394633 TRBV5-4A0A0C4DH59 114 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 STK16O75716 305 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms