RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 DDX10Q13206 875 aaKnown RBP1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 CDH18Q13634 790 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 TAB1Q15750 504 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 KLHL26Q53HC5 615 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 FHL5Q5TD97 284 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 SNX30Q5VWJ9 437 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 FAM166AQ6J272 317 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 FIGLAQ6QHK4 219 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 BAIAP2L2Q6UXY1 529 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 TMUB2Q71RG4 321 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 FCRLAQ7L513 359 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 ADGRA1Q86SQ6 560 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 SLC47A2Q86VL8 602 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 FAM131BQ86XD5 332 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 HPS6Q86YV9 775 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 OR4N5Q8IXE1 308 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 RPAP2Q8IXW5 612 aaPredicted RBP1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 LGI2Q8N0V4 545 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 ARHGAP24Q8N264 748 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 ABHD12Q8N2K0 398 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 ZNF843Q8N446 348 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 FBXO39Q8N4B4 442 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 WDTC1Q8N5D0 677 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 AQP11Q8NBQ7 271 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 NOA1Q8NC60 698 aaKnown RBP1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 NPEPL1Q8NDH3 523 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 APPL2Q8NEU8 664 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 IL17REQ8NFR9 667 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 OR10G7Q8NGN6 311 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 OR1L3Q8NH93 324 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 RHOXF1Q8NHV9 184 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 CHPT1Q8WUD6 406 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 ZFAND2BQ8WV99 257 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 SSMEM1Q8WWF3 244 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 METTL21AQ8WXB1 218 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 SYN2Q92777 582 aaPredicted RBP1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 JAKMIP2Q96AA8 810 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 DHX58Q96C10 678 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 CNOT6LQ96LI5 555 aaKnown RBP1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 C10orf90Q96M02 699 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 C16orf70Q9BSU1 422 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 TEX12Q9BXU0 123 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 PRRG4Q9BZD6 226 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 OR2B2Q9GZK3 357 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 ZNF701Q9NV72 531 aaPredicted RBP1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 RHCGQ9UBD6 479 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 CLIP2Q9UDT6 1046 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 SEC63Q9UGP8 760 aaKnown RBP1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 DAPK2Q9UIK4 370 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 GTF3C4Q9UKN8 822 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 CELA1Q9UNI1 258 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 PPIEQ9UNP9 301 aaKnown RBP1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 CHKBQ9Y259 395 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 PPP2R2CQ9Y2T4 447 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 PIAS3Q9Y6X2 628 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 R4GN57 208 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 SOS1Q07889 1333 aaPredicted RBP1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 IGSF1Q8N6C5 1336 aa1.08□□□□□ -2.24
SNORD28B-201ENST00000390993 IGHV4-30-2A0A087WSY4 118 aa1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 MEX3AA1L020 520 aaKnown RBP1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 PI4KAP2A4QPH2 592 aa1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 PGPEP1LA6NFU8 196 aa1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 EPM2AB3EWF7 344 aa1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 B4E171 279 aa1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 J3KRW8 73 aa1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 SLC1A7O00341 560 aa1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 TRAFD1O14545 582 aaPredicted RBP1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 CTDSP2O14595 271 aa1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 VILLO15195 856 aa1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 SURF4O15260 269 aa1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 GALR3O60755 368 aaPredicted RBP1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 ZBED4O75132 1171 aa1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 SH3BGRLO75368 114 aa1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 MBD4O95243 580 aa1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 TBX18O95935 607 aa1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 HOXD4P09016 255 aaPredicted RBP1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 IRF2P14316 349 aa1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 GP9P14770 177 aa1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 AADACP22760 399 aa1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 JAK1P23458 1154 aa1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 EEF1B2P24534 225 aaKnown RBP1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 ELAVL4P26378 380 aaKnown RBP1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 PKLRP30613 574 aa1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 ACSL1P33121 698 aa1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 TSPAN7P41732 249 aa1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 DNA2P51530 1060 aa1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 STAT2P52630 851 aa1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 PNLIPRP2P54317 469 aa1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 XGP55808 180 aa1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 IRX4P78413 519 aa1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 ZFP36L1Q07352 338 aaKnown RBP1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 LMOD3Q0VAK6 560 aa1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 TRAP1Q12931 704 aaKnown RBP1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 TAF10Q12962 218 aa1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 ZNF177Q13360 481 aaPredicted RBP1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 TRIM29Q14134 588 aa1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 LY6DQ14210 128 aa1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 HERC3Q15034 1050 aa1.07□□□□□ -2.24
SNORD28B-201ENST00000390993 PTPN14Q15678 1187 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms