RNA–Protein interactions for RNA: ENST00000390485.1

TRAJ53-201, Transcript of T cell receptor alpha joining 53, humanhuman

APPRIS P1 BASIC

Gene TRAJ53, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ53-201ENST00000390485 JAKMIP2Q96AA8 810 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 CHMP4CQ96CF2 233 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 BBS4Q96RK4 519 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 ACOX2Q99424 681 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 SIL1Q9H173 461 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 NANOGQ9H9S0 305 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 FGF21Q9NSA1 209 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 ARMCX1Q9P291 453 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 DUX4Q9UBX2 424 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 IP6K2Q9UHH9 426 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 OPN4Q9UHM6 478 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 BAIAP2L1Q9UHR4 511 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 C19orf53Q9UNZ5 99 aaPredicted RBP-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 PRG3Q9Y2Y8 225 aaPredicted RBP-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 MRPL11Q9Y3B7 192 aaKnown RBP-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 PCDHGB2Q9Y5G2 931 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 CEPT1Q9Y6K0 416 aa-0.81□□□□□ -2.54
TRAJ53-201ENST00000390485 ARID2Q68CP9 1835 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 CABIN1Q9Y6J0 2220 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 POM121BA6NF01 834 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 CCT8L1PA6NM43 557 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 E7EVH7 732 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 RHBDL1O75783 438 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 HSPB1P04792 205 aaKnown RBP-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 TNNT1P13805 278 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 RDXP35241 583 aaKnown RBP-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 MNAT1P51948 309 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 SLC25A1P53007 311 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 RPS3AP61247 264 aaKnown RBP-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 CXCL6P80162 114 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 GOLGA8FQ08AF8 430 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 ITPK1Q13572 414 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 SQLEQ14534 574 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 HIST2H2ACQ16777 129 aaPredicted RBP-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 TOR1AIP1Q5JTV8 583 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 FBXO47Q5MNV8 452 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 FAM109BQ6ICB4 259 aaPredicted RBP-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 DPPA4Q7L190 304 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 LINC01551Q86U37 167 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 GPAT4Q86UL3 456 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 RPAP2Q8IXW5 612 aaPredicted RBP-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 CPSF7Q8N684 471 aaKnown RBP-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 EMC1Q8N766 993 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 FAM71BQ8TC56 605 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 LRGUKQ96M69 825 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 GUCD1Q96NT3 240 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 CCT8L2Q96SF2 557 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 GFI1Q99684 422 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 SMAD5Q99717 465 aaKnown RBP-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 LMAN2LQ9H0V9 348 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 FAM204AQ9H8W3 233 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 TRIM45Q9H8W5 580 aaPredicted RBP-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 PLEKHA2Q9HB19 425 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 TM7SF3Q9NS93 570 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 MIOSQ9NXC5 875 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 NDUFAF4Q9P032 175 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 CTNNAL1Q9UBT7 734 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 FAM96BQ9Y3D0 163 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 ZNF337Q9Y3M9 751 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 SNX13Q9Y5W8 968 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 AUP1Q9Y679 476 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 KMT2EQ8IZD2 1858 aa-0.82□□□□□ -2.54
TRAJ53-201ENST00000390485 IGLV1-50A0A075B6I6 118 aa-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 IGLV2-33A0A075B6J2 118 aaPredicted RBP-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 TRBV6-6A0A0A6YYG2 114 aa-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 IGHV3-35A0A0C4DH35 117 aa-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 E2F3O00716 465 aa-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 APOL1O14791 398 aa-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 SEPT4O43236 478 aa-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 TFP02787 698 aa-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 HCKP08631 526 aa-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 RPL35AP18077 110 aaKnown RBP-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 PTGER4P35408 488 aa-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 MAZP56270 477 aaKnown RBP-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 CD81P60033 236 aa-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 FAM193AP78312 1265 aa-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 ROR1Q01973 937 aa-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 TNFRSF9Q07011 255 aa-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 FOXF1Q12946 379 aa-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 VEPH1Q14D04 833 aa-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 TAF11Q15544 211 aa-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 KIAA0753Q2KHM9 967 aa-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 ARL13BQ3SXY8 428 aa-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 JADE1Q6IE81 842 aa-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 SYNE3Q6ZMZ3 975 aa-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 RAB11FIP2Q7L804 512 aa-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 ARHGAP22Q7Z5H3 698 aa-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 CCDC117Q8IWD4 279 aaPredicted RBP-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 THAP8Q8NA92 274 aa-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 FAM156AQ8NDB6 213 aa-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 PHLDA1Q8WV24 401 aaPredicted RBP-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 CNOT9Q92600 299 aaKnown RBP-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 SLC35E1Q96K37 410 aa-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 LINC00477Q96M19 166 aa-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 C18orf15Q96N68 181 aa-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 MCCC1Q96RQ3 725 aaPredicted RBP-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 PRPF18Q99633 342 aaKnown RBP-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 PCGF1Q9BSM1 259 aa-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 OR2B2Q9GZK3 357 aa-0.83□□□□□ -2.54
TRAJ53-201ENST00000390485 BRD8Q9H0E9 1235 aa-0.83□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms