RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 LRRCC1Q9C099 1032 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 MTHFD2LQ9H903 347 aaPredicted RBP0.36□□□□□ -2.35
SNORD28-201ENST00000384706 POLR1BQ9H9Y6 1135 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 CHMP1AQ9HD42 196 aaPredicted RBP0.36□□□□□ -2.35
SNORD28-201ENST00000384706 KCNMB3Q9NPA1 279 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 CYTL1Q9NRR1 136 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 PLSCR3Q9NRY6 295 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 KRT84Q9NSB2 600 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 FAM207AQ9NSI2 230 aaPredicted RBP0.36□□□□□ -2.35
SNORD28-201ENST00000384706 CUTCQ9NTM9 273 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 STAU2Q9NUL3 570 aaKnown RBP eCLIP0.36□□□□□ -2.35
SNORD28-201ENST00000384706 SETD4Q9NVD3 440 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 TAS2R14Q9NYV8 317 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 RHCGQ9UBD6 479 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 AMACRQ9UHK6 382 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 TBX20Q9UMR3 447 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 PCDHGB3Q9Y5G1 929 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 CYP46A1Q9Y6A2 500 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 R4GN57 208 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 KDM3AQ9Y4C1 1321 aa0.36□□□□□ -2.35
SNORD28-201ENST00000384706 IGHV3-38A0A0C4DH36 116 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 KIR2DL5BA0A0G2JN68 375 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 KIR2DL5BA0A0G2JPC4 375 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 TRBV4-1A0A0J9YWV2 114 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 A0A1B0GTH9 108 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 A0A1W2PQF6 199 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 HEPACAM2A8MVW5 462 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 ARHGEF33A8MVX0 844 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 K7EQD1 137 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 FPGTO14772 594 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 VILLO15195 856 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 TEX28O15482 410 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 DFNA5O60443 496 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 RNASEH1O60930 286 aaKnown RBP0.35□□□□□ -2.35
SNORD28-201ENST00000384706 NXPH4O95158 308 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 VENTXO95231 258 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 WDPCPO95876 746 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 RENP00797 406 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 MT-ND1P03886 318 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 SMIM18P0DKX4 95 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 ODC1P11926 461 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 ACTN1P12814 892 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 TMEM11P17152 192 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 ELK1P19419 428 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 GPX3P22352 226 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 LMO2P25791 158 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 EPHA8P29322 1005 aaPredicted RBP0.35□□□□□ -2.35
SNORD28-201ENST00000384706 GABRA5P31644 462 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 ELK3P41970 407 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 MATKP42679 507 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 DNA2P51530 1060 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 CCR3P51677 355 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 PRELPP51888 382 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 RIDAP52758 137 aaKnown RBP0.35□□□□□ -2.35
SNORD28-201ENST00000384706 ERVK-16P61578 105 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 MYL7Q01449 175 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 ACY1Q03154 408 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 TLE2Q04725 743 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 CKAP4Q07065 602 aaKnown RBP0.35□□□□□ -2.35
SNORD28-201ENST00000384706 ZNF415Q09FC8 603 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 NIPAL4Q0D2K0 466 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 IKQ13123 557 aaPredicted RBP0.35□□□□□ -2.35
SNORD28-201ENST00000384706 PPFIA1Q13136 1202 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 SGCGQ13326 291 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 ITPK1Q13572 414 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 MORC3Q14149 939 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 EIF4A2Q14240 407 aaKnown RBP0.35□□□□□ -2.35
SNORD28-201ENST00000384706 MED22Q15528 200 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 PTPN14Q15678 1187 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 EXT1Q16394 746 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 TMEM44Q2T9K0 475 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 TIMM50Q3ZCQ8 353 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 SLC22A6Q4U2R8 563 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 FAM98BQ52LJ0 330 aaKnown RBP0.35□□□□□ -2.35
SNORD28-201ENST00000384706 XKR4Q5GH76 650 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 SLC35D3Q5M8T2 416 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 SPDYCQ5MJ68 293 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 ELFN2Q5R3F8 820 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 RARS2Q5T160 578 aaKnown RBP0.35□□□□□ -2.35
SNORD28-201ENST00000384706 UTF1Q5T230 341 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 C9orf66Q5T8R8 295 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 GKAP1Q5VSY0 366 aaPredicted RBP0.35□□□□□ -2.35
SNORD28-201ENST00000384706 INO80CQ6PI98 192 aaPredicted RBP0.35□□□□□ -2.35
SNORD28-201ENST00000384706 FIGLAQ6QHK4 219 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 C3P1Q6ZMU1 363 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 LEKR1Q6ZMV7 388 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 CLEC17AQ6ZS10 378 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 SERINC5Q86VE9 423 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 LRRTM4Q86VH4 590 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 ARMC8Q8IUR7 673 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 ARID3BQ8IVW6 561 aaPredicted RBP0.35□□□□□ -2.35
SNORD28-201ENST00000384706 ENTHD1Q8IYW4 607 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 SCYL3Q8IZE3 742 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 KIR2DL5AQ8N109 375 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 ZNF561Q8N587 486 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 FRMD1Q8N878 549 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 NPEPL1Q8NDH3 523 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 OR10G7Q8NGN6 311 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 OR2AJ1Q8NGZ0 328 aa0.35□□□□□ -2.35
SNORD28-201ENST00000384706 FLVCR1-AS1Q8TAF5 88 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms