RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 CROTQ9UKG9 612 aa12.2□□□□□ -0.46
CLCN6-206ENST00000376496 PNMA8BQ9ULN7 279 aaPredicted RBP12.2□□□□□ -0.46
CLCN6-206ENST00000376496 SNX6Q9UNH7 406 aa12.2□□□□□ -0.46
CLCN6-206ENST00000376496 CCDC154A6NI56 674 aa12.2□□□□□ -0.46
CLCN6-206ENST00000376496 FXYD1O00168 92 aa12.2□□□□□ -0.46
CLCN6-206ENST00000376496 SLC28A1O00337 649 aa12.2□□□□□ -0.46
CLCN6-206ENST00000376496 IFRD1O00458 451 aaPredicted RBP12.2□□□□□ -0.46
CLCN6-206ENST00000376496 ANKRD28O15084 1053 aa12.2□□□□□ -0.46
CLCN6-206ENST00000376496 KMOO15229 486 aa12.2□□□□□ -0.46
CLCN6-206ENST00000376496 JUPP14923 745 aa12.2□□□□□ -0.46
CLCN6-206ENST00000376496 PXNP49023 591 aaPredicted RBP12.2□□□□□ -0.46
CLCN6-206ENST00000376496 RCAN2Q14206 197 aa12.2□□□□□ -0.46
CLCN6-206ENST00000376496 METTL2BQ6P1Q9 378 aaKnown RBP12.2□□□□□ -0.46
CLCN6-206ENST00000376496 FAM160A2Q8N612 972 aaPredicted RBP12.2□□□□□ -0.46
CLCN6-206ENST00000376496 CDC26Q8NHZ8 85 aa12.2□□□□□ -0.46
CLCN6-206ENST00000376496 NRG4Q8WWG1 115 aa12.2□□□□□ -0.46
CLCN6-206ENST00000376496 RLN3Q8WXF3 142 aa12.2□□□□□ -0.46
CLCN6-206ENST00000376496 ATL1Q8WXF7 558 aa12.2□□□□□ -0.46
CLCN6-206ENST00000376496 FAM131CQ96AQ9 280 aa12.2□□□□□ -0.46
CLCN6-206ENST00000376496 PDXPQ96GD0 296 aa12.2□□□□□ -0.46
CLCN6-206ENST00000376496 UHRF1Q96T88 793 aaPredicted RBP12.2□□□□□ -0.46
CLCN6-206ENST00000376496 INSM2Q96T92 566 aaPredicted RBP12.2□□□□□ -0.46
CLCN6-206ENST00000376496 CDX2Q99626 313 aaPredicted RBP12.2□□□□□ -0.46
CLCN6-206ENST00000376496 DCLRE1BQ9H816 532 aa12.2□□□□□ -0.46
CLCN6-206ENST00000376496 SGK2Q9HBY8 427 aa12.2□□□□□ -0.46
CLCN6-206ENST00000376496 NOP53Q9NZM5 478 aaKnown RBP12.2□□□□□ -0.46
CLCN6-206ENST00000376496 MMP17Q9ULZ9 603 aa12.2□□□□□ -0.46
CLCN6-206ENST00000376496 SDK1Q7Z5N4 2213 aa12.19□□□□□ -0.46
CLCN6-206ENST00000376496 TRBV23OR9-2A0A075B6M9 112 aa12.19□□□□□ -0.46
CLCN6-206ENST00000376496 MAP3K7O43318 606 aa12.19□□□□□ -0.46
CLCN6-206ENST00000376496 PNLIPRP1P54315 467 aa12.19□□□□□ -0.46
CLCN6-206ENST00000376496 KIAA0040Q15053 153 aa12.19□□□□□ -0.46
CLCN6-206ENST00000376496 AGERQ15109 404 aa12.19□□□□□ -0.46
CLCN6-206ENST00000376496 PDCD4Q53EL6 469 aaKnown RBP12.19□□□□□ -0.46
CLCN6-206ENST00000376496 RABL3Q5HYI8 236 aa12.19□□□□□ -0.46
CLCN6-206ENST00000376496 FAM20CQ8IXL6 584 aa12.19□□□□□ -0.46
CLCN6-206ENST00000376496 CCL4L1Q8NHW4 92 aa12.19□□□□□ -0.46
CLCN6-206ENST00000376496 TSACCQ96A04 125 aaPredicted RBP12.19□□□□□ -0.46
CLCN6-206ENST00000376496 C12orf66Q96MD2 445 aa12.19□□□□□ -0.46
CLCN6-206ENST00000376496 TMEM74Q96NL1 305 aa12.19□□□□□ -0.46
CLCN6-206ENST00000376496 DPEP2Q9H4A9 486 aa12.19□□□□□ -0.46
CLCN6-206ENST00000376496 PRDM8Q9NQV8 689 aa12.19□□□□□ -0.46
CLCN6-206ENST00000376496 PRDM6Q9NQX0 595 aa12.19□□□□□ -0.46
CLCN6-206ENST00000376496 C1orf109Q9NX04 203 aa12.19□□□□□ -0.46
CLCN6-206ENST00000376496 CYP8B1Q9UNU6 501 aa12.19□□□□□ -0.46
CLCN6-206ENST00000376496 USP22Q9UPT9 525 aa12.19□□□□□ -0.46
CLCN6-206ENST00000376496 KANSL1LA0AUZ9 987 aa12.19□□□□□ -0.46
CLCN6-206ENST00000376496 MAGEB17A8MXT2 336 aa12.19□□□□□ -0.46
CLCN6-206ENST00000376496 SAP18O00422 153 aaKnown RBP12.19□□□□□ -0.46
CLCN6-206ENST00000376496 ANP32DO95626 131 aa12.19□□□□□ -0.46
CLCN6-206ENST00000376496 SLC35G4P0C7Q5 338 aa12.19□□□□□ -0.46
CLCN6-206ENST00000376496 BCKDHAP12694 445 aa12.19□□□□□ -0.46
CLCN6-206ENST00000376496 AK4P27144 223 aaPredicted RBP12.19□□□□□ -0.46
CLCN6-206ENST00000376496 NFYCQ13952 458 aa12.19□□□□□ -0.46
CLCN6-206ENST00000376496 COL9A2Q14055 689 aaPredicted RBP12.19□□□□□ -0.46
CLCN6-206ENST00000376496 CLCA4Q14CN2 919 aa12.19□□□□□ -0.46
CLCN6-206ENST00000376496 EOGTQ5NDL2 527 aa12.19□□□□□ -0.46
CLCN6-206ENST00000376496 CAPN13Q6MZZ7 669 aaPredicted RBP12.19□□□□□ -0.46
CLCN6-206ENST00000376496 ENPP7Q6UWV6 458 aa12.19□□□□□ -0.46
CLCN6-206ENST00000376496 DNAJC14Q6Y2X3 702 aaPredicted RBP12.19□□□□□ -0.46
CLCN6-206ENST00000376496 RNF111Q6ZNA4 994 aa12.19□□□□□ -0.46
CLCN6-206ENST00000376496 LRRC56Q8IYG6 542 aaPredicted RBP12.19□□□□□ -0.46
CLCN6-206ENST00000376496 CCT7Q99832 543 aa12.19□□□□□ -0.46
CLCN6-206ENST00000376496 C6orf106Q9H6K1 298 aaPredicted RBP12.19□□□□□ -0.46
CLCN6-206ENST00000376496 CARS2Q9HA77 564 aaKnown RBP12.19□□□□□ -0.46
CLCN6-206ENST00000376496 PRPF19Q9UMS4 504 aaKnown RBP12.19□□□□□ -0.46
CLCN6-206ENST00000376496 PCM1Q15154 2024 aa12.19□□□□□ -0.46
CLCN6-206ENST00000376496 CROCCQ5TZA2 2017 aa12.19□□□□□ -0.46
CLCN6-206ENST00000376496 A0A1W2PP18 115 aa12.18□□□□□ -0.46
CLCN6-206ENST00000376496 PDZK1P1A8MUH7 402 aa12.18□□□□□ -0.46
CLCN6-206ENST00000376496 NME4O00746 187 aa12.18□□□□□ -0.46
CLCN6-206ENST00000376496 EML2O95834 649 aa12.18□□□□□ -0.46
CLCN6-206ENST00000376496 ME2P23368 584 aa12.18□□□□□ -0.46
CLCN6-206ENST00000376496 TDGQ13569 410 aa12.18□□□□□ -0.46
CLCN6-206ENST00000376496 MLF2Q15773 248 aaPredicted RBP12.18□□□□□ -0.46
CLCN6-206ENST00000376496 GGTA1PQ4G0N0 100 aa12.18□□□□□ -0.46
CLCN6-206ENST00000376496 PTCRAQ6ISU1 281 aaPredicted RBP12.18□□□□□ -0.46
CLCN6-206ENST00000376496 CYP2R1Q6VVX0 501 aa12.18□□□□□ -0.46
CLCN6-206ENST00000376496 SLCO4C1Q6ZQN7 724 aa12.18□□□□□ -0.46
CLCN6-206ENST00000376496 GALNT13Q8IUC8 556 aa12.18□□□□□ -0.46
CLCN6-206ENST00000376496 OXR1Q8N573 874 aa12.18□□□□□ -0.46
CLCN6-206ENST00000376496 DEFB119Q8N690 84 aa12.18□□□□□ -0.46
CLCN6-206ENST00000376496 ENDOVQ8N8Q3 282 aaKnown RBP12.18□□□□□ -0.46
CLCN6-206ENST00000376496 BHLHE22Q8NFJ8 381 aaPredicted RBP12.18□□□□□ -0.46
CLCN6-206ENST00000376496 GPR156Q8NFN8 814 aa12.18□□□□□ -0.46
CLCN6-206ENST00000376496 OR1E3Q8WZA6 343 aa12.18□□□□□ -0.46
CLCN6-206ENST00000376496 BMFQ96LC9 184 aa12.18□□□□□ -0.46
CLCN6-206ENST00000376496 HHIPQ96QV1 700 aa12.18□□□□□ -0.46
CLCN6-206ENST00000376496 FERD3LQ96RJ6 166 aa12.18□□□□□ -0.46
CLCN6-206ENST00000376496 TPSD1Q9BZJ3 242 aa12.18□□□□□ -0.46
CLCN6-206ENST00000376496 PREBQ9HCU5 417 aa12.18□□□□□ -0.46
CLCN6-206ENST00000376496 EIF3LQ9Y262 564 aaKnown RBP12.18□□□□□ -0.46
CLCN6-206ENST00000376496 KCNE2Q9Y6J6 123 aa12.18□□□□□ -0.46
CLCN6-206ENST00000376496 SLCO1B1Q9Y6L6 691 aa12.18□□□□□ -0.46
CLCN6-206ENST00000376496 AKAP10O43572 662 aa12.18□□□□□ -0.46
CLCN6-206ENST00000376496 GNAZP19086 355 aa12.18□□□□□ -0.46
CLCN6-206ENST00000376496 PTDSS1P48651 473 aaKnown RBP12.18□□□□□ -0.46
CLCN6-206ENST00000376496 FLOT2Q14254 428 aa12.18□□□□□ -0.46
CLCN6-206ENST00000376496 GAS6Q14393 721 aa12.18□□□□□ -0.46
CLCN6-206ENST00000376496 SLBPQ14493 270 aaKnown RBP eCLIP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms