RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 DMPKQ09013 629 aa20.53■□□□□ 0.88
HLA-C-201ENST00000376228 PTCHD3Q3KNS1 767 aa20.53■□□□□ 0.88
HLA-C-201ENST00000376228 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.53■□□□□ 0.88
HLA-C-201ENST00000376228 UNC5DQ6UXZ4 953 aa20.53■□□□□ 0.88
HLA-C-201ENST00000376228 CDYL2Q8N8U2 506 aa20.53■□□□□ 0.88
HLA-C-201ENST00000376228 MIPEPQ99797 713 aa20.53■□□□□ 0.88
HLA-C-201ENST00000376228 OR52A5Q9H2C5 316 aa20.53■□□□□ 0.88
HLA-C-201ENST00000376228 MMADHCQ9H3L0 296 aaPredicted RBP20.53■□□□□ 0.88
HLA-C-201ENST00000376228 CNOT1A5YKK6 2376 aaKnown RBP20.53■□□□□ 0.88
HLA-C-201ENST00000376228 A0A1W2PR77 199 aa20.53■□□□□ 0.88
HLA-C-201ENST00000376228 VILLO15195 856 aa20.53■□□□□ 0.88
HLA-C-201ENST00000376228 GSC2O15499 205 aa20.53■□□□□ 0.88
HLA-C-201ENST00000376228 CAPN1P07384 714 aa20.53■□□□□ 0.88
HLA-C-201ENST00000376228 CD59P13987 128 aa20.53■□□□□ 0.88
HLA-C-201ENST00000376228 EPORP19235 508 aa20.53■□□□□ 0.88
HLA-C-201ENST00000376228 ACADVLP49748 655 aa20.53■□□□□ 0.88
HLA-C-201ENST00000376228 PTK2BQ14289 1009 aa20.53■□□□□ 0.88
HLA-C-201ENST00000376228 DNAL1Q4LDG9 190 aa20.53■□□□□ 0.88
HLA-C-201ENST00000376228 PRAMEF14Q5SWL7 426 aa20.53■□□□□ 0.88
HLA-C-201ENST00000376228 CRTC3Q6UUV7 619 aa20.53■□□□□ 0.88
HLA-C-201ENST00000376228 IL27RAQ6UWB1 636 aa20.53■□□□□ 0.88
HLA-C-201ENST00000376228 SPATA19Q7Z5L4 167 aa20.53■□□□□ 0.88
HLA-C-201ENST00000376228 DDIASQ8IXT1 998 aa20.53■□□□□ 0.88
HLA-C-201ENST00000376228 UTP4Q969X6 686 aaKnown RBP20.53■□□□□ 0.88
HLA-C-201ENST00000376228 CADM1Q9BY67 442 aaKnown RBP20.53■□□□□ 0.88
HLA-C-201ENST00000376228 DNAJC11Q9NVH1 559 aa20.53■□□□□ 0.88
HLA-C-201ENST00000376228 RIC8BQ9NVN3 520 aa20.53■□□□□ 0.88
HLA-C-201ENST00000376228 POLG2Q9UHN1 485 aa20.53■□□□□ 0.88
HLA-C-201ENST00000376228 SLC17A4Q9Y2C5 497 aa20.53■□□□□ 0.88
HLA-C-201ENST00000376228 CLDN9O95484 217 aa20.52■□□□□ 0.87
HLA-C-201ENST00000376228 CTSKP43235 329 aa20.52■□□□□ 0.87
HLA-C-201ENST00000376228 PFN3P60673 137 aa20.52■□□□□ 0.87
HLA-C-201ENST00000376228 METRNLQ641Q3 311 aa20.52■□□□□ 0.87
HLA-C-201ENST00000376228 L3MBTL4Q8NA19 623 aa20.52■□□□□ 0.87
HLA-C-201ENST00000376228 RBM15BQ8NDT2 890 aaKnown RBP20.52■□□□□ 0.87
HLA-C-201ENST00000376228 OR56A3Q8NH54 315 aa20.52■□□□□ 0.87
HLA-C-201ENST00000376228 SCARF2Q96GP6 870 aaPredicted RBP20.52■□□□□ 0.87
HLA-C-201ENST00000376228 CAMK1GQ96NX5 476 aa20.52■□□□□ 0.87
HLA-C-201ENST00000376228 APOOQ9BUR5 198 aa20.52■□□□□ 0.87
HLA-C-201ENST00000376228 TM7SF3Q9NS93 570 aa20.52■□□□□ 0.87
HLA-C-201ENST00000376228 STOX2Q9P2F5 926 aaPredicted RBP20.52■□□□□ 0.87
HLA-C-201ENST00000376228 FAM8A1Q9UBU6 413 aa20.52■□□□□ 0.87
HLA-C-201ENST00000376228 DMTF1Q9Y222 760 aa20.52■□□□□ 0.87
HLA-C-201ENST00000376228 ATP6AP2A0A1C7CYW4 349 aa20.51■□□□□ 0.87
HLA-C-201ENST00000376228 H0Y8X5 98 aa20.51■□□□□ 0.87
HLA-C-201ENST00000376228 UGDHO60701 494 aa20.51■□□□□ 0.87
HLA-C-201ENST00000376228 ATP6AP2O75787 350 aa20.51■□□□□ 0.87
HLA-C-201ENST00000376228 LINC00032P0C843 101 aa20.51■□□□□ 0.87
HLA-C-201ENST00000376228 HMOX2P30519 316 aa20.51■□□□□ 0.87
HLA-C-201ENST00000376228 CPOXP36551 454 aa20.51■□□□□ 0.87
HLA-C-201ENST00000376228 ELF3P78545 371 aaPredicted RBP20.51■□□□□ 0.87
HLA-C-201ENST00000376228 NFE2L1Q14494 772 aa20.51■□□□□ 0.87
HLA-C-201ENST00000376228 GSTA3Q16772 222 aa20.51■□□□□ 0.87
HLA-C-201ENST00000376228 SMU1Q2TAY7 513 aa20.51■□□□□ 0.87
HLA-C-201ENST00000376228 PDZD3Q86UT5 571 aa20.51■□□□□ 0.87
HLA-C-201ENST00000376228 CFAP61Q8NHU2 1237 aa20.51■□□□□ 0.87
HLA-C-201ENST00000376228 MAGEC3Q8TD91 643 aa20.51■□□□□ 0.87
HLA-C-201ENST00000376228 TUBGCP3Q96CW5 907 aa20.51■□□□□ 0.87
HLA-C-201ENST00000376228 CDK15Q96Q40 435 aa20.51■□□□□ 0.87
HLA-C-201ENST00000376228 TIMM29Q9BSF4 260 aa20.51■□□□□ 0.87
HLA-C-201ENST00000376228 TMEM45AQ9NWC5 275 aa20.51■□□□□ 0.87
HLA-C-201ENST00000376228 BTRCQ9Y297 605 aa20.51■□□□□ 0.87
HLA-C-201ENST00000376228 PCYT1BQ9Y5K3 369 aaPredicted RBP20.51■□□□□ 0.87
HLA-C-201ENST00000376228 PRAMEF26H0Y7S4 382 aa20.5■□□□□ 0.87
HLA-C-201ENST00000376228 SH3BP5O60239 455 aa20.5■□□□□ 0.87
HLA-C-201ENST00000376228 EZRP15311 586 aaKnown RBP20.5■□□□□ 0.87
HLA-C-201ENST00000376228 CPA2P48052 419 aa20.5■□□□□ 0.87
HLA-C-201ENST00000376228 CLDN2P57739 230 aa20.5■□□□□ 0.87
HLA-C-201ENST00000376228 KIAA1024LP59773 190 aa20.5■□□□□ 0.87
HLA-C-201ENST00000376228 MAPRE2Q15555 327 aa20.5■□□□□ 0.87
HLA-C-201ENST00000376228 DOK6Q6PKX4 331 aa20.5■□□□□ 0.87
HLA-C-201ENST00000376228 AGTRAPQ6RW13 159 aa20.5■□□□□ 0.87
HLA-C-201ENST00000376228 FAM83HQ6ZRV2 1179 aaPredicted RBP20.5■□□□□ 0.87
HLA-C-201ENST00000376228 ARHGAP24Q8N264 748 aa20.5■□□□□ 0.87
HLA-C-201ENST00000376228 PKP4Q99569 1192 aa20.5■□□□□ 0.87
HLA-C-201ENST00000376228 SLC23A2Q9UGH3 650 aa20.5■□□□□ 0.87
HLA-C-201ENST00000376228 ACSL5Q9ULC5 683 aa20.5■□□□□ 0.87
HLA-C-201ENST00000376228 OR1A2Q9Y585 309 aa20.5■□□□□ 0.87
HLA-C-201ENST00000376228 SERTM1A2A2V5 107 aa20.49■□□□□ 0.87
HLA-C-201ENST00000376228 TLR4O00206 839 aa20.49■□□□□ 0.87
HLA-C-201ENST00000376228 CACNB4O00305 520 aaPredicted RBP20.49■□□□□ 0.87
HLA-C-201ENST00000376228 CEACAM5P06731 702 aa20.49■□□□□ 0.87
HLA-C-201ENST00000376228 ALDOCP09972 364 aaKnown RBP20.49■□□□□ 0.87
HLA-C-201ENST00000376228 IMPA1P29218 277 aa20.49■□□□□ 0.87
HLA-C-201ENST00000376228 NUDT1P36639 197 aa20.49■□□□□ 0.87
HLA-C-201ENST00000376228 ZNF33BQ06732 778 aa20.49■□□□□ 0.87
HLA-C-201ENST00000376228 CYLC2Q14093 348 aaPredicted RBP20.49■□□□□ 0.87
HLA-C-201ENST00000376228 Q6ZSR9 355 aa20.49■□□□□ 0.87
HLA-C-201ENST00000376228 TRIM46Q7Z4K8 759 aa20.49■□□□□ 0.87
HLA-C-201ENST00000376228 PIP4P1Q86T03 277 aa20.49■□□□□ 0.87
HLA-C-201ENST00000376228 C10orf67Q8IYJ2 551 aa20.49■□□□□ 0.87
HLA-C-201ENST00000376228 POU5F2Q8N7G0 328 aa20.49■□□□□ 0.87
HLA-C-201ENST00000376228 TMEM145Q8NBT3 493 aa20.49■□□□□ 0.87
HLA-C-201ENST00000376228 USP7Q93009 1102 aa20.49■□□□□ 0.87
HLA-C-201ENST00000376228 G3BP2Q9UN86 482 aaKnown RBP20.49■□□□□ 0.87
HLA-C-201ENST00000376228 PTGDR2Q9Y5Y4 395 aa20.49■□□□□ 0.87
HLA-C-201ENST00000376228 PRR19A6NJB7 356 aa20.48■□□□□ 0.87
HLA-C-201ENST00000376228 PSMD12O00232 456 aaPredicted RBP20.48■□□□□ 0.87
HLA-C-201ENST00000376228 TOR1BO14657 336 aa20.48■□□□□ 0.87
HLA-C-201ENST00000376228 MGRN1O60291 552 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms