RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 EPB41L1Q9H4G0 881 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 ZDHHC6Q9H6R6 413 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 KCTD5Q9NXV2 234 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 IL36AQ9UHA7 158 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 ABCA7Q8IZY2 2146 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 FAM149AA5PLN7 773 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 K7EPI3 171 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 FFAR3O14843 346 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 GPR42O15529 346 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 LEFTY1O75610 366 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 TFAP2AP05549 437 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 P2RY2P41231 377 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 RPL38P63173 70 aaKnown RBP15.12■□□□□ 0.01
CCDC40-202ENST00000374876 LPAL2Q16609 132 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 INTS11Q5TA45 600 aaKnown RBP15.12■□□□□ 0.01
CCDC40-202ENST00000374876 PRR23BQ6ZRT6 265 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 CARM1Q86X55 608 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 CBR4Q8N4T8 237 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 DEFB119Q8N690 84 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 GANCQ8TET4 914 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 CENPNQ96H22 339 aaPredicted RBP15.12■□□□□ 0.01
CCDC40-202ENST00000374876 COPS8Q99627 209 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 HEPHQ9BQS7 1158 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 SUV39H2Q9H5I1 410 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 FBRSQ9HAH7 460 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 RDH14Q9HBH5 336 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 ZDHHC3Q9NYG2 299 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 SERGEFQ9UGK8 458 aa15.12■□□□□ 0.01
CCDC40-202ENST00000374876 MBD1Q9UIS9 605 aaPredicted RBP15.12■□□□□ 0.01
CCDC40-202ENST00000374876 EIF3LQ9Y262 564 aaKnown RBP15.12■□□□□ 0.01
CCDC40-202ENST00000374876 MYOCOSA0A1B0GUC4 107 aa15.11■□□□□ 0.01
CCDC40-202ENST00000374876 A0A1W2PP55 124 aa15.11■□□□□ 0.01
CCDC40-202ENST00000374876 AGAP14A8MT82 685 aa15.11■□□□□ 0.01
CCDC40-202ENST00000374876 SLC28A1O00337 649 aa15.11■□□□□ 0.01
CCDC40-202ENST00000374876 LILRB5O75023 590 aa15.11■□□□□ 0.01
CCDC40-202ENST00000374876 ULK1O75385 1050 aa15.11■□□□□ 0.01
CCDC40-202ENST00000374876 CBSLP0DN79 551 aa15.11■□□□□ 0.01
CCDC40-202ENST00000374876 EPB42P16452 691 aa15.11■□□□□ 0.01
CCDC40-202ENST00000374876 BCKDHBP21953 392 aa15.11■□□□□ 0.01
CCDC40-202ENST00000374876 JAK1P23458 1154 aa15.11■□□□□ 0.01
CCDC40-202ENST00000374876 HTR1EP28566 365 aa15.11■□□□□ 0.01
CCDC40-202ENST00000374876 CBSP35520 551 aa15.11■□□□□ 0.01
CCDC40-202ENST00000374876 PLOD1Q02809 727 aaPredicted RBP15.11■□□□□ 0.01
CCDC40-202ENST00000374876 MAD2L1Q13257 205 aaPredicted RBP15.11■□□□□ 0.01
CCDC40-202ENST00000374876 ARHGEF7Q14155 803 aa15.11■□□□□ 0.01
CCDC40-202ENST00000374876 METTL2BQ6P1Q9 378 aaKnown RBP15.11■□□□□ 0.01
CCDC40-202ENST00000374876 PROSER1Q86XN7 944 aa15.11■□□□□ 0.01
CCDC40-202ENST00000374876 AADATQ8N5Z0 425 aa15.11■□□□□ 0.01
CCDC40-202ENST00000374876 UBTD2Q8WUN7 234 aa15.11■□□□□ 0.01
CCDC40-202ENST00000374876 GAB3Q8WWW8 586 aa15.11■□□□□ 0.01
CCDC40-202ENST00000374876 VOPP1Q96AW1 172 aa15.11■□□□□ 0.01
CCDC40-202ENST00000374876 ULK4Q96C45 1275 aa15.11■□□□□ 0.01
CCDC40-202ENST00000374876 PHOX2BQ99453 314 aa15.11■□□□□ 0.01
CCDC40-202ENST00000374876 ZBTB18Q99592 522 aa15.11■□□□□ 0.01
CCDC40-202ENST00000374876 ACTL8Q9H568 366 aa15.11■□□□□ 0.01
CCDC40-202ENST00000374876 PIF1Q9H611 641 aa15.11■□□□□ 0.01
CCDC40-202ENST00000374876 FBXL12Q9NXK8 326 aa15.11■□□□□ 0.01
CCDC40-202ENST00000374876 USP36Q9P275 1121 aaKnown RBP15.11■□□□□ 0.01
CCDC40-202ENST00000374876 KLQ9UEF7 1012 aa15.11■□□□□ 0.01
CCDC40-202ENST00000374876 ANAPC2Q9UJX6 822 aa15.11■□□□□ 0.01
CCDC40-202ENST00000374876 RNF11Q9Y3C5 154 aa15.11■□□□□ 0.01
CCDC40-202ENST00000374876 NUMA1Q14980 2115 aa15.11■□□□□ 0.01
CCDC40-202ENST00000374876 IGHV1OR15-9A0A0B4J2B8 117 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 KPNA3O00505 521 aaPredicted RBP15.1■□□□□ 0.01
CCDC40-202ENST00000374876 ZNF217O75362 1048 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 POP4O95707 220 aaKnown RBP15.1■□□□□ 0.01
CCDC40-202ENST00000374876 UMPSP11172 480 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 VARSP26640 1264 aaKnown RBP15.1■□□□□ 0.01
CCDC40-202ENST00000374876 PIK3CGP48736 1102 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 DGKQP52824 942 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 ROR2Q01974 943 aaKnown RBP15.1■□□□□ 0.01
CCDC40-202ENST00000374876 CREB5Q02930 508 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 SIM2Q14190 667 aaPredicted RBP15.1■□□□□ 0.01
CCDC40-202ENST00000374876 IMPG1Q17R60 797 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 CEP68Q76N32 757 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 DSG4Q86SJ6 1040 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 PLPP6Q8IY26 295 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 HDDC3Q8N4P3 179 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 ZFAND2BQ8WV99 257 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 ECHDC3Q96DC8 303 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 PPM1MQ96MI6 270 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 C9orf16Q9BUW7 83 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 GRIP2Q9C0E4 1043 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 ABCG8Q9H221 673 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 PADI4Q9UM07 663 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 CCL27Q9Y4X3 112 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 COMMD3-BMI1R4GMX3 469 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 SCN8AQ9UQD0 1980 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 ZNF106Q9H2Y7 1883 aaKnown RBP15.1■□□□□ 0.01
CCDC40-202ENST00000374876 RNF103-CHMP3A0A140T963 221 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 TCRBV5S2A0A599 114 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 ARHGAP10A1A4S6 786 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 ANKRD28O15084 1053 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 STK16O75716 305 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 WDR47O94967 919 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 OR6B1O95007 311 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 ANXA5P08758 320 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 EBLN1P0CF75 366 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 DRD3P35462 400 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 CCT8P50990 548 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms