RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 DONSONQ9NYP3 566 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 ARMCX1Q9P291 453 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 STX18Q9P2W9 335 aaKnown RBP4.75□□□□□ -1.65
USP48-202ENST00000374730 NKX1-2Q9UD57 310 aaPredicted RBP4.75□□□□□ -1.65
USP48-202ENST00000374730 DNAJB4Q9UDY4 337 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 MARCOQ9UEW3 520 aaPredicted RBP4.75□□□□□ -1.65
USP48-202ENST00000374730 SERTAD3Q9UJW9 196 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 SCML2Q9UQR0 700 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 HTTP42858 3142 aa4.75□□□□□ -1.65
USP48-202ENST00000374730 IGLV3-10A0A075B6K4 115 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 FAM92AA1XBS5 289 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 E9PAM4 449 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 SLCO1B7G3V0H7 640 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 DFFAO00273 331 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 QSOX1O00391 747 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 SYN3O14994 580 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 CCNT2O60583 730 aaKnown RBP4.74□□□□□ -1.65
USP48-202ENST00000374730 NBNO60934 754 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 CIB2O75838 187 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 OAZ2O95190 189 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 PAPSS2O95340 614 aaPredicted RBP4.74□□□□□ -1.65
USP48-202ENST00000374730 HLA-DQB2P05538 268 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 KITP10721 976 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 SLC2A3P11169 496 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 HSD3B1P14060 373 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 ACADSP16219 412 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 ATP6V1C1P21283 382 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 CERS1P27544 350 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 CRABP2P29373 138 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 ARRB2P32121 409 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 CPOXP36551 454 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 SERPINB5P36952 375 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 CPA2P48052 419 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 ARCN1P48444 511 aaKnown RBP4.74□□□□□ -1.65
USP48-202ENST00000374730 CD151P48509 253 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 PTDSS1P48651 473 aaKnown RBP4.74□□□□□ -1.65
USP48-202ENST00000374730 TUBP50607 506 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 ZNF81P51508 661 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 CLCN2P51788 898 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 KPNA2P52292 529 aaKnown RBP4.74□□□□□ -1.65
USP48-202ENST00000374730 NDST2P52849 883 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 COPAP53621 1224 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 CLNS1AP54105 237 aaKnown RBP4.74□□□□□ -1.65
USP48-202ENST00000374730 ALDH18A1P54886 795 aaKnown RBP4.74□□□□□ -1.65
USP48-202ENST00000374730 EEFSECP57772 596 aaKnown RBP4.74□□□□□ -1.65
USP48-202ENST00000374730 RAB10P61026 200 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 ACTR3P61158 418 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 SSBP2P81877 361 aaPredicted RBP4.74□□□□□ -1.65
USP48-202ENST00000374730 ARHGAP8P85298 464 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 SLC34A1Q06495 639 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 ASPHQ12797 758 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 SLC12A1Q13621 1099 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 SIM2Q14190 667 aaPredicted RBP4.74□□□□□ -1.65
USP48-202ENST00000374730 RCN2Q14257 317 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 FGL2Q14314 439 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 KPNB1Q14974 876 aaKnown RBP4.74□□□□□ -1.65
USP48-202ENST00000374730 NAA25Q14CX7 972 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 RCN1Q15293 331 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 TAF11Q15544 211 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 SRSF7Q16629 238 aaKnown RBP eCLIP4.74□□□□□ -1.65
USP48-202ENST00000374730 SLC44A4Q53GD3 710 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 FSCBQ5H9T9 825 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 DGKKQ5KSL6 1271 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 LIPMQ5VYY2 423 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 RGS7BPQ6MZT1 257 aaPredicted RBP4.74□□□□□ -1.65
USP48-202ENST00000374730 RWDD4Q6NW29 188 aaKnown RBP4.74□□□□□ -1.65
USP48-202ENST00000374730 KDELC1Q6UW63 502 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 EPGNQ6UW88 154 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 RANBP10Q6VN20 620 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 FAM43BQ6ZT52 329 aaPredicted RBP4.74□□□□□ -1.65
USP48-202ENST00000374730 GALNT7Q86SF2 657 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 ADGRG6Q86SQ4 1221 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 SETD3Q86TU7 594 aaPredicted RBP4.74□□□□□ -1.65
USP48-202ENST00000374730 MON1AQ86VX9 555 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 DENND1CQ8IV53 801 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 ZNF683Q8IZ20 524 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 DCP1BQ8IZD4 617 aaKnown RBP4.74□□□□□ -1.65
USP48-202ENST00000374730 NUP93Q8N1F7 819 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 UMODL1-AS1Q8N2C9 162 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 VPS37AQ8NEZ2 397 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 SCAMP5Q8TAC9 235 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 GABPB2Q8TAK5 448 aaPredicted RBP4.74□□□□□ -1.65
USP48-202ENST00000374730 SCARB1Q8WTV0 552 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 STYXQ8WUJ0 223 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 PDCD6IPQ8WUM4 868 aaKnown RBP4.74□□□□□ -1.65
USP48-202ENST00000374730 STMN2Q93045 179 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 AZIN2Q96A70 460 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 CMTM5Q96DZ9 223 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 ZNF419Q96HQ0 510 aaPredicted RBP4.74□□□□□ -1.65
USP48-202ENST00000374730 NAF1Q96HR8 494 aaKnown RBP4.74□□□□□ -1.65
USP48-202ENST00000374730 CELF6Q96J87 481 aaKnown RBP4.74□□□□□ -1.65
USP48-202ENST00000374730 ZC3H10Q96K80 434 aaKnown RBP4.74□□□□□ -1.65
USP48-202ENST00000374730 TSNARE1Q96NA8 513 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 APOL2Q9BQE5 337 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 FAM167BQ9BTA0 163 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 FICDQ9BVA6 458 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 GATA5Q9BWX5 397 aaPredicted RBP4.74□□□□□ -1.65
USP48-202ENST00000374730 FSD1LQ9BXM9 530 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 SLC39A8Q9C0K1 460 aa4.74□□□□□ -1.65
USP48-202ENST00000374730 DRC3Q9H069 523 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms