RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 LATO43561 262 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 NARSO43776 548 aaKnown RBP10.38□□□□□ -0.75
TPM3-212ENST00000368533 MT-ND1P03886 318 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 CYP2A6P11509 494 aaPredicted RBP10.38□□□□□ -0.75
TPM3-212ENST00000368533 ADRB3P13945 408 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 SLC7A1P30825 629 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 CLCQ05315 142 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 ABRQ12979 859 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 NFYCQ13952 458 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 SGO1Q5FBB7 561 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 ANKS6Q68DC2 871 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 KIAA1191Q96A73 305 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 DERL2Q9GZP9 239 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 DHRS7Q9Y394 339 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 GPSM3Q9Y4H4 160 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 DGKBQ9Y6T7 804 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 SCN8AQ9UQD0 1980 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 EDDM13A0A1B0GTR0 161 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 FFAR3O14843 346 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 GPR42O15529 346 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 TSPAN6O43657 245 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 KERAO60938 352 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 MYO1DO94832 1006 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 CHEK2O96017 543 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 PCCBP05166 539 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 SRPRAP08240 638 aaKnown RBP10.38□□□□□ -0.75
TPM3-212ENST00000368533 INHBBP09529 407 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 C6P13671 934 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 MSH3P20585 1137 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 IL10P22301 178 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 GPX3P22352 226 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 JAK1P23458 1154 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 MMP12P39900 470 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 ELAVL3Q14576 367 aaKnown RBP10.38□□□□□ -0.75
TPM3-212ENST00000368533 ZNF284Q2VY69 593 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 CYHR1Q6ZMK1 362 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 CDYL2Q8N8U2 506 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 OR2T34Q8NGX1 318 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 OR2T3Q8NH03 318 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 MTFMTQ96DP5 389 aaKnown RBP10.38□□□□□ -0.75
TPM3-212ENST00000368533 MKRN2Q9H000 416 aaKnown RBP10.38□□□□□ -0.75
TPM3-212ENST00000368533 OR2AG1Q9H205 316 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 POLR1BQ9H9Y6 1135 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 ZDHHC3Q9NYG2 299 aa10.38□□□□□ -0.75
TPM3-212ENST00000368533 NOTOA8MTQ0 251 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 TOR1BO14657 336 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 SH3BGRLO75368 114 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 PRNPP04156 253 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 APODP05090 189 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 CAPN3P20807 821 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 ATP6V1B2P21281 511 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 P2RY2P41231 377 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 SUOXP51687 545 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 KCNK10P57789 538 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 CERS6Q6ZMG9 384 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 USP43Q70EL4 1123 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 GALNT7Q86SF2 657 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 TRAPPC5Q8IUR0 188 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 TMEM126BQ8IUX1 230 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 OFCC1Q8IZS5 231 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 NKAPQ8N5F7 415 aaKnown RBP10.37□□□□□ -0.75
TPM3-212ENST00000368533 C2orf73Q8N5S3 287 aaPredicted RBP10.37□□□□□ -0.75
TPM3-212ENST00000368533 CSGALNACT1Q8TDX6 532 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 WFIKKN2Q8TEU8 576 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 CYGBQ8WWM9 190 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 L3HYPDHQ96EM0 354 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 LYSMD1Q96S90 227 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 ATG10Q9H0Y0 220 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 TMEM245Q9H330 911 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 SOX17Q9H6I2 414 aaPredicted RBP10.37□□□□□ -0.75
TPM3-212ENST00000368533 MARCH7Q9H992 704 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 CLK4Q9HAZ1 481 aaKnown RBP10.37□□□□□ -0.75
TPM3-212ENST00000368533 WDR70Q9NW82 654 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 MOSPD1Q9UJG1 213 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 ERGIC3Q9Y282 383 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 VPS9D1Q9Y2B5 631 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 PCYT1BQ9Y5K3 369 aaPredicted RBP10.37□□□□□ -0.75
TPM3-212ENST00000368533 TICRRQ7Z2Z1 1910 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 IGLON5A6NGN9 336 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 C2CD4DB7Z1M9 353 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 NME4O00746 187 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 PAK4O96013 591 aaPredicted RBP10.37□□□□□ -0.75
TPM3-212ENST00000368533 EGFP01133 1207 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 MTHFD1P11586 935 aaKnown RBP10.37□□□□□ -0.75
TPM3-212ENST00000368533 NCK1P16333 377 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 NSG1P42857 185 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 RPS3AP61247 264 aaKnown RBP10.37□□□□□ -0.75
TPM3-212ENST00000368533 TFF2Q03403 129 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 TRAP1Q12931 704 aaKnown RBP10.37□□□□□ -0.75
TPM3-212ENST00000368533 INPP5AQ14642 412 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 MAPK11Q15759 364 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 TTC33Q6PID6 262 aaPredicted RBP10.37□□□□□ -0.75
TPM3-212ENST00000368533 SBSNQ6UWP8 590 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 PIWIL3Q7Z3Z3 882 aaKnown RBP10.37□□□□□ -0.75
TPM3-212ENST00000368533 CBR4Q8N4T8 237 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 ZNF557Q8N988 423 aaPredicted RBP10.37□□□□□ -0.75
TPM3-212ENST00000368533 NUDT8Q8WV74 236 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 SLCO4A1Q96BD0 722 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 RIPOR3Q96MK2 946 aa10.37□□□□□ -0.75
TPM3-212ENST00000368533 OSBPL11Q9BXB4 747 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms