RNA–Protein interactions for RNA: ENST00000366942.3

USH2A-202, Transcript of usherin, humanhuman

TSL 1 (best) BASIC

Gene USH2A, Length 6,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-202ENST00000366942 ELOA3Q8NG57 546 aa4□□□□□ -1.77
USH2A-202ENST00000366942 RASSF5Q8WWW0 418 aa4□□□□□ -1.77
USH2A-202ENST00000366942 SORCS1Q8WY21 1168 aa4□□□□□ -1.77
USH2A-202ENST00000366942 NSMAFQ92636 917 aa4□□□□□ -1.77
USH2A-202ENST00000366942 MAP4K1Q92918 833 aa4□□□□□ -1.77
USH2A-202ENST00000366942 RAB1CQ92928 201 aa4□□□□□ -1.77
USH2A-202ENST00000366942 PYCR2Q96C36 320 aa4□□□□□ -1.77
USH2A-202ENST00000366942 MBOAT7Q96N66 472 aa4□□□□□ -1.77
USH2A-202ENST00000366942 TMEM79Q9BSE2 394 aa4□□□□□ -1.77
USH2A-202ENST00000366942 DOHHQ9BU89 302 aa4□□□□□ -1.77
USH2A-202ENST00000366942 MAT2BQ9NZL9 334 aa4□□□□□ -1.77
USH2A-202ENST00000366942 ZIM2Q9NZV7 527 aa4□□□□□ -1.77
USH2A-202ENST00000366942 RSL24D1Q9UHA3 163 aaKnown RBP4□□□□□ -1.77
USH2A-202ENST00000366942 SLC7A11Q9UPY5 501 aa4□□□□□ -1.77
USH2A-202ENST00000366942 RPH3AQ9Y2J0 694 aaPredicted RBP4□□□□□ -1.77
USH2A-202ENST00000366942 PCDHA3Q9Y5H8 950 aa4□□□□□ -1.77
USH2A-202ENST00000366942 SLCO1B7G3V0H7 640 aa4□□□□□ -1.77
USH2A-202ENST00000366942 CYP21A2P08686 494 aa4□□□□□ -1.77
USH2A-202ENST00000366942 ZSCAN5DPP0CG00 497 aa4□□□□□ -1.77
USH2A-202ENST00000366942 TRIM49P0CI25 452 aa4□□□□□ -1.77
USH2A-202ENST00000366942 TRIM49CP0CI26 452 aa4□□□□□ -1.77
USH2A-202ENST00000366942 PFKFB1P16118 471 aa4□□□□□ -1.77
USH2A-202ENST00000366942 CSNK2A2P19784 350 aaPredicted RBP4□□□□□ -1.77
USH2A-202ENST00000366942 CRABP2P29373 138 aa4□□□□□ -1.77
USH2A-202ENST00000366942 OAS2P29728 719 aaKnown RBP4□□□□□ -1.77
USH2A-202ENST00000366942 MPIP34949 423 aa4□□□□□ -1.77
USH2A-202ENST00000366942 CYB561P49447 251 aa4□□□□□ -1.77
USH2A-202ENST00000366942 IFI35P80217 286 aaPredicted RBP4□□□□□ -1.77
USH2A-202ENST00000366942 E2F2Q14209 437 aa4□□□□□ -1.77
USH2A-202ENST00000366942 CYTH1Q15438 398 aa4□□□□□ -1.77
USH2A-202ENST00000366942 STEAP3Q658P3 488 aa4□□□□□ -1.77
USH2A-202ENST00000366942 C3orf33Q6P1S2 294 aa4□□□□□ -1.77
USH2A-202ENST00000366942 TRAF7Q6Q0C0 670 aa4□□□□□ -1.77
USH2A-202ENST00000366942 KMT5CQ86Y97 462 aa4□□□□□ -1.77
USH2A-202ENST00000366942 DCUN1D3Q8IWE4 304 aa4□□□□□ -1.77
USH2A-202ENST00000366942 KATNAL2Q8IYT4 538 aa4□□□□□ -1.77
USH2A-202ENST00000366942 DAGLBQ8NCG7 672 aa4□□□□□ -1.77
USH2A-202ENST00000366942 ZNF555Q8NEP9 628 aa4□□□□□ -1.77
USH2A-202ENST00000366942 OR13C3Q8NGS6 347 aa4□□□□□ -1.77
USH2A-202ENST00000366942 OR8S1Q8NH09 359 aa4□□□□□ -1.77
USH2A-202ENST00000366942 OR52J3Q8NH60 311 aa4□□□□□ -1.77
USH2A-202ENST00000366942 STAG3L4Q8TBR4 150 aa4□□□□□ -1.77
USH2A-202ENST00000366942 SPRYD4Q8WW59 207 aaPredicted RBP4□□□□□ -1.77
USH2A-202ENST00000366942 REEP2Q9BRK0 252 aa4□□□□□ -1.77
USH2A-202ENST00000366942 PECRQ9BY49 303 aa4□□□□□ -1.77
USH2A-202ENST00000366942 TNKS2Q9H2K2 1166 aa4□□□□□ -1.77
USH2A-202ENST00000366942 ESRP2Q9H6T0 727 aaKnown RBP4□□□□□ -1.77
USH2A-202ENST00000366942 SAYSD1Q9NPB0 183 aa4□□□□□ -1.77
USH2A-202ENST00000366942 HSFX1Q9UBD0 423 aa4□□□□□ -1.77
USH2A-202ENST00000366942 ZNF282Q9UDV7 671 aaPredicted RBP4□□□□□ -1.77
USH2A-202ENST00000366942 FZD1Q9UP38 647 aa4□□□□□ -1.77
USH2A-202ENST00000366942 AK9Q5TCS8 1911 aa4□□□□□ -1.77
USH2A-202ENST00000366942 SCAMP3O14828 347 aaKnown RBP4□□□□□ -1.77
USH2A-202ENST00000366942 ZNF185O15231 689 aa4□□□□□ -1.77
USH2A-202ENST00000366942 ZBTB11O95625 1053 aaPredicted RBP4□□□□□ -1.77
USH2A-202ENST00000366942 CCDC166P0CW27 439 aa4□□□□□ -1.77
USH2A-202ENST00000366942 ZNF8P17098 575 aaPredicted RBP4□□□□□ -1.77
USH2A-202ENST00000366942 ARF4P18085 180 aaPredicted RBP4□□□□□ -1.77
USH2A-202ENST00000366942 RARRES1P49788 294 aa4□□□□□ -1.77
USH2A-202ENST00000366942 GYS2P54840 703 aa4□□□□□ -1.77
USH2A-202ENST00000366942 RELBQ01201 579 aa4□□□□□ -1.77
USH2A-202ENST00000366942 PLCXD2Q0VAA5 305 aa4□□□□□ -1.77
USH2A-202ENST00000366942 MYBPC3Q14896 1274 aa4□□□□□ -1.77
USH2A-202ENST00000366942 ARSIQ5FYB1 569 aa4□□□□□ -1.77
USH2A-202ENST00000366942 CCNYL2Q5T2Q4 361 aa4□□□□□ -1.77
USH2A-202ENST00000366942 PAPD7Q5XG87 772 aaKnown RBP4□□□□□ -1.77
USH2A-202ENST00000366942 PDPK2PQ6A1A2 396 aa4□□□□□ -1.77
USH2A-202ENST00000366942 DRICH1Q6PGQ1 229 aaPredicted RBP4□□□□□ -1.77
USH2A-202ENST00000366942 BEND4Q6ZU67 534 aa4□□□□□ -1.77
USH2A-202ENST00000366942 ZFP41Q8N8Y5 198 aa4□□□□□ -1.77
USH2A-202ENST00000366942 IFI44Q8TCB0 444 aa4□□□□□ -1.77
USH2A-202ENST00000366942 PIGTQ969N2 578 aa4□□□□□ -1.77
USH2A-202ENST00000366942 FAM136AQ96C01 138 aa4□□□□□ -1.77
USH2A-202ENST00000366942 ZNF597Q96LX8 424 aa4□□□□□ -1.77
USH2A-202ENST00000366942 KATNB1Q9BVA0 655 aa4□□□□□ -1.77
USH2A-202ENST00000366942 SHARPINQ9H0F6 387 aa4□□□□□ -1.77
USH2A-202ENST00000366942 OR2AG1Q9H205 316 aa4□□□□□ -1.77
USH2A-202ENST00000366942 FARSAQ9Y285 508 aaKnown RBP4□□□□□ -1.77
USH2A-202ENST00000366942 ATP23Q9Y6H3 246 aa4□□□□□ -1.77
USH2A-202ENST00000366942 CNTRLQ7Z7A1 2325 aa4□□□□□ -1.77
USH2A-202ENST00000366942 RNF103-CHMP3A0A140T963 221 aa3.99□□□□□ -1.77
USH2A-202ENST00000366942 WDR27A2RRH5 827 aa3.99□□□□□ -1.77
USH2A-202ENST00000366942 VSTM2BA6NLU5 285 aa3.99□□□□□ -1.77
USH2A-202ENST00000366942 HSPB2A8KAH6 182 aa3.99□□□□□ -1.77
USH2A-202ENST00000366942 SLC33A1O00400 549 aaPredicted RBP3.99□□□□□ -1.77
USH2A-202ENST00000366942 TOR1AO14656 332 aa3.99□□□□□ -1.77
USH2A-202ENST00000366942 CRYAAP02489 173 aa3.99□□□□□ -1.77
USH2A-202ENST00000366942 ARSAP15289 507 aa3.99□□□□□ -1.77
USH2A-202ENST00000366942 GATMP50440 423 aa3.99□□□□□ -1.77
USH2A-202ENST00000366942 RAB2AP61019 212 aa3.99□□□□□ -1.77
USH2A-202ENST00000366942 CACNG1Q06432 222 aa3.99□□□□□ -1.77
USH2A-202ENST00000366942 NPY5RQ15761 445 aa3.99□□□□□ -1.77
USH2A-202ENST00000366942 HSPB2Q16082 182 aa3.99□□□□□ -1.77
USH2A-202ENST00000366942 EXOC3L2Q2M3D2 409 aa3.99□□□□□ -1.77
USH2A-202ENST00000366942 PLEKHN1Q494U1 663 aaPredicted RBP3.99□□□□□ -1.77
USH2A-202ENST00000366942 ZNF805Q5CZA5 627 aa3.99□□□□□ -1.77
USH2A-202ENST00000366942 SMYD5Q6GMV2 418 aa3.99□□□□□ -1.77
USH2A-202ENST00000366942 DHRS13Q6UX07 377 aa3.99□□□□□ -1.77
USH2A-202ENST00000366942 UNQ6494/PRO21346Q6UXR6 183 aa3.99□□□□□ -1.77
USH2A-202ENST00000366942 CASP12Q6UXS9 341 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms