RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 CPNE2Q96FN4 548 aaPredicted RBP11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 NLE1Q9NVX2 485 aaPredicted RBP11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 TMEM5Q9Y2B1 443 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 ARL5AQ9Y689 179 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 CA12O43570 354 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 ABCB7O75027 752 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 XRCC1P18887 633 aaPredicted RBP11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 NRG1Q02297 640 aaPredicted RBP11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 MOGQ16653 247 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 LDB1Q86U70 411 aaPredicted RBP11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 OSTF1Q92882 214 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 PRSS51A0A1B0GVH4 220 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 METTL21EPA6NDL7 271 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 EPHX1P07099 455 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 F8A1P23610 371 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 RPL13AP3Q6NVV1 102 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 TMEM135Q86UB9 458 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 KLHL36Q8N4N3 616 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 PQLC3Q8N755 202 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 ERMAPQ96PL5 475 aaPredicted RBP11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 MRPS30Q9NP92 439 aaKnown RBP11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 RIMKLBQ9ULI2 386 aa11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 MRPS17Q9Y2R5 130 aaKnown RBP11.76□□□□□ -0.53
CDC42BPA-203ENST00000366766 RPP38P78345 283 aaKnown RBP11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 ZNF829Q3KNS6 432 aaPredicted RBP11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 ATG9BQ674R7 924 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 NUS1Q96E22 293 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 MTERF1Q99551 399 aaKnown RBP11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 XYLT2Q9H1B5 865 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 OR1F1O43749 312 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 PPP3R1P63098 170 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 SLC10A7Q0GE19 358 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 SCARB2Q14108 478 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 CDKL4Q5MAI5 379 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 GPR152Q8TDT2 470 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 SP140LQ9H930 580 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 PPM1HQ9ULR3 514 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 GATBO75879 557 aaKnown RBP11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 GIMD1P0DJR0 217 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 CSNK2A2P19784 350 aaPredicted RBP11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 CBX5P45973 191 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 GABARAPL2P60520 117 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 TMEM220Q6QAJ8 160 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 CAND1Q86VP6 1230 aaKnown RBP11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 SMPDL3AQ92484 453 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 SLC35A5Q9BS91 424 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 TLE6Q9H808 572 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 FZD1Q9UP38 647 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 H1F0P07305 194 aaKnown RBP11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 ACSL1P33121 698 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 NRIP1P48552 1158 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 ZNF155Q12901 538 aaPredicted RBP11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 CBLBQ13191 982 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 GPR17Q13304 367 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 ATP6AP1Q15904 470 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 KLHDC10Q6PID8 442 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 ANKRD46Q86W74 232 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 CANT1Q8WVQ1 401 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 ZNF354BQ96LW1 612 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 TRIM36Q9NQ86 728 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 KDELR3O43731 214 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 ZNF460Q14592 562 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 TNFAIP8L1Q8WVP5 186 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 PYURFQ96I23 114 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 CDADC1Q9BWV3 514 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 TPK1Q9H3S4 243 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 MAT2BQ9NZL9 334 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 COQ9O75208 318 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 AHSGP02765 367 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 GHRHRQ02643 423 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 SLC14A2Q15849 920 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 SH3PXD2AQ5TCZ1 1133 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 MEDAGQ5VYS4 303 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 GDPD4Q6W3E5 623 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 ACAT2Q9BWD1 397 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 MAGIXQ9H6Y5 334 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 RBPJLQ9UBG7 517 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 AASSQ9UDR5 926 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 TFECO14948 347 aaPredicted RBP11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 RNASEH2AO75792 299 aaKnown RBP11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 ATF6P18850 670 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 ARCN1P48444 511 aaKnown RBP11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 MTPNP58546 118 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 SMU1Q2TAY7 513 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 TPRG1Q6ZUI0 275 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 RCBTB2O95199 551 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 PFKLP17858 780 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 DGKGP49619 791 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 OR10G2Q8NGC3 310 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 ATG10Q9H0Y0 220 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 RNF19AQ9NV58 838 aa11.75□□□□□ -0.53
CDC42BPA-203ENST00000366766 CXorf49A8MYA2 514 aaPredicted RBP11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 EEDO75530 441 aaKnown RBP11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 ENDOUP21128 410 aaKnown RBP11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 GET4Q7L5D6 327 aaPredicted RBP11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 STON2Q8WXE9 905 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 COL21A1Q96P44 957 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 RFPL1O75677 317 aa11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 MAPK3P27361 379 aaPredicted RBP11.74□□□□□ -0.53
CDC42BPA-203ENST00000366766 PSMD8P48556 350 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms