RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 TRUB2O95900 331 aaKnown RBP3.84□□□□□ -1.79
RNU4-28P-201ENST00000364739 LHCGRP22888 699 aa3.84□□□□□ -1.79
RNU4-28P-201ENST00000364739 AZGP1P25311 298 aaKnown RBP3.84□□□□□ -1.79
RNU4-28P-201ENST00000364739 HNF4AP41235 474 aa3.84□□□□□ -1.79
RNU4-28P-201ENST00000364739 LIG4P49917 911 aa3.84□□□□□ -1.79
RNU4-28P-201ENST00000364739 IRX6P78412 446 aaPredicted RBP3.84□□□□□ -1.79
RNU4-28P-201ENST00000364739 IFI35P80217 286 aaPredicted RBP3.84□□□□□ -1.79
RNU4-28P-201ENST00000364739 IL11RAQ14626 422 aa3.84□□□□□ -1.79
RNU4-28P-201ENST00000364739 MCMDC2Q4G0Z9 681 aa3.84□□□□□ -1.79
RNU4-28P-201ENST00000364739 LCN1P1Q5VSP4 162 aa3.84□□□□□ -1.79
RNU4-28P-201ENST00000364739 NUDT13Q86X67 352 aa3.84□□□□□ -1.79
RNU4-28P-201ENST00000364739 SLC4A11Q8NBS3 891 aa3.84□□□□□ -1.79
RNU4-28P-201ENST00000364739 OR10G8Q8NGN5 311 aa3.84□□□□□ -1.79
RNU4-28P-201ENST00000364739 OR1L3Q8NH93 324 aa3.84□□□□□ -1.79
RNU4-28P-201ENST00000364739 ZNF519Q8TB69 540 aa3.84□□□□□ -1.79
RNU4-28P-201ENST00000364739 ZNRF4Q8WWF5 429 aa3.84□□□□□ -1.79
RNU4-28P-201ENST00000364739 DGAT2Q96PD7 388 aa3.84□□□□□ -1.79
RNU4-28P-201ENST00000364739 TRIM51Q9BSJ1 452 aa3.84□□□□□ -1.79
RNU4-28P-201ENST00000364739 APOL6Q9BWW8 343 aa3.84□□□□□ -1.79
RNU4-28P-201ENST00000364739 TRIM17Q9Y577 477 aa3.84□□□□□ -1.79
RNU4-28P-201ENST00000364739 C15orf61A6NNL5 157 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 SNURFLB1AK76 121 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 TRIM77I1YAP6 450 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 PI15O43692 258 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 GLRA3O75311 464 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 CDK2AP2O75956 126 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 SEC24AO95486 1093 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 LINGO3P0C6S8 592 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 CYP11B2P19099 503 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 CD27P26842 260 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 NNMTP40261 264 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 ZNF75DP51815 510 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 EXT1Q16394 746 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 LETM2Q2VYF4 491 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 SLC35D3Q5M8T2 416 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 GARNL3Q5VVW2 1013 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 UGT3A1Q6NUS8 523 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 TRIM65Q6PJ69 517 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 FIP1L1Q6UN15 594 aaKnown RBP3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 FAM198BQ6UWH4 519 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 CAMKMTQ7Z624 323 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 LRRTM1Q86UE6 522 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 FAM222BQ8WU58 562 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 APOBEC4Q8WW27 367 aaKnown RBP3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 SLCO2A1Q92959 643 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 LINC00615Q96LM1 132 aaPredicted RBP3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 SEPHS2Q99611 448 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 DCTN5Q9BTE1 182 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 GPR88Q9GZN0 384 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 TLE6Q9H808 572 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 CNOT10Q9H9A5 744 aaKnown RBP3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 NSMCE4AQ9NXX6 385 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 NUDT4Q9NZJ9 180 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 THEGQ9P2T0 379 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 SLC24A2Q9UI40 661 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 WDR83OSQ9Y284 106 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 RPS6KL1Q9Y6S9 549 aa3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 COL2A1P02458 1487 aaPredicted RBP3.83□□□□□ -1.8
RNU4-28P-201ENST00000364739 A0A1W2PPQ1 181 aa3.82□□□□□ -1.8
RNU4-28P-201ENST00000364739 PSMD10O75832 226 aa3.82□□□□□ -1.8
RNU4-28P-201ENST00000364739 ACSL3O95573 720 aa3.82□□□□□ -1.8
RNU4-28P-201ENST00000364739 STARD3NLO95772 234 aa3.82□□□□□ -1.8
RNU4-28P-201ENST00000364739 ABCB1P08183 1280 aaPredicted RBP3.82□□□□□ -1.8
RNU4-28P-201ENST00000364739 PTGER4P35408 488 aa3.82□□□□□ -1.8
RNU4-28P-201ENST00000364739 MTHFRP42898 656 aa3.82□□□□□ -1.8
RNU4-28P-201ENST00000364739 CSNK2BP67870 215 aa3.82□□□□□ -1.8
RNU4-28P-201ENST00000364739 UBXN2AP68543 259 aa3.82□□□□□ -1.8
RNU4-28P-201ENST00000364739 MTF1Q14872 753 aa3.82□□□□□ -1.8
RNU4-28P-201ENST00000364739 WLSQ5T9L3 541 aa3.82□□□□□ -1.8
RNU4-28P-201ENST00000364739 CFAP161Q6P656 301 aa3.82□□□□□ -1.8
RNU4-28P-201ENST00000364739 METTL7BQ6UX53 244 aa3.82□□□□□ -1.8
RNU4-28P-201ENST00000364739 AVL9Q8NBF6 648 aa3.82□□□□□ -1.8
RNU4-28P-201ENST00000364739 USP28Q96RU2 1077 aa3.82□□□□□ -1.8
RNU4-28P-201ENST00000364739 MRPL1Q9BYD6 325 aaKnown RBP3.82□□□□□ -1.8
RNU4-28P-201ENST00000364739 PITPNM3Q9BZ71 974 aa3.82□□□□□ -1.8
RNU4-28P-201ENST00000364739 STK26Q9P289 416 aa3.82□□□□□ -1.8
RNU4-28P-201ENST00000364739 TRPV2Q9Y5S1 764 aa3.82□□□□□ -1.8
RNU4-28P-201ENST00000364739 R4GN57 208 aa3.82□□□□□ -1.8
RNU4-28P-201ENST00000364739 TADA2AO75478 443 aa3.81□□□□□ -1.8
RNU4-28P-201ENST00000364739 RAB40ALP0C0E4 278 aa3.81□□□□□ -1.8
RNU4-28P-201ENST00000364739 SLC2A2P11168 524 aaPredicted RBP3.81□□□□□ -1.8
RNU4-28P-201ENST00000364739 UGT1A4P22310 534 aa3.81□□□□□ -1.8
RNU4-28P-201ENST00000364739 PRKACGP22612 351 aa3.81□□□□□ -1.8
RNU4-28P-201ENST00000364739 GATA2P23769 480 aaPredicted RBP3.81□□□□□ -1.8
RNU4-28P-201ENST00000364739 ALDH1B1P30837 517 aa3.81□□□□□ -1.8
RNU4-28P-201ENST00000364739 LMAN1P49257 510 aa3.81□□□□□ -1.8
RNU4-28P-201ENST00000364739 XGP55808 180 aa3.81□□□□□ -1.8
RNU4-28P-201ENST00000364739 POLR2LP62875 67 aaKnown RBP3.81□□□□□ -1.8
RNU4-28P-201ENST00000364739 PRKG2Q13237 762 aa3.81□□□□□ -1.8
RNU4-28P-201ENST00000364739 TAF1BQ53T94 588 aaPredicted RBP3.81□□□□□ -1.8
RNU4-28P-201ENST00000364739 ZNF343Q6P1L6 599 aa3.81□□□□□ -1.8
RNU4-28P-201ENST00000364739 ENOSF1Q7L5Y1 443 aa3.81□□□□□ -1.8
RNU4-28P-201ENST00000364739 G2E3Q7L622 706 aa3.81□□□□□ -1.8
RNU4-28P-201ENST00000364739 ADGRA1Q86SQ6 560 aa3.81□□□□□ -1.8
RNU4-28P-201ENST00000364739 KLHDC1Q8N7A1 406 aa3.81□□□□□ -1.8
RNU4-28P-201ENST00000364739 TSPAN14Q8NG11 270 aa3.81□□□□□ -1.8
RNU4-28P-201ENST00000364739 OR4K1Q8NGD4 311 aa3.81□□□□□ -1.8
RNU4-28P-201ENST00000364739 OR6S1Q8NH40 331 aa3.81□□□□□ -1.8
RNU4-28P-201ENST00000364739 FAM71F1Q96KD3 344 aaPredicted RBP3.81□□□□□ -1.8
RNU4-28P-201ENST00000364739 ZNF300Q96RE9 604 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms