RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 SEC14L3Q9UDX4 400 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 ADAM30Q9UKF2 790 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 FABP12A6NFH5 140 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 ACOX3O15254 700 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 CCNDBP1O95273 360 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 FDXRP22570 491 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 ABHD18Q0P651 414 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 PM20D1Q6GTS8 502 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 AGMOQ6ZNB7 445 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 PAQR9Q6ZVX9 377 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 TTPALQ9BTX7 342 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 TPT1P8Q9HAU6 139 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 FARSBQ9NSD9 589 aaKnown RBP13.56□□□□□ -0.24
COL6A1-201ENST00000361866 STX16O14662 325 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 GPR32O75388 356 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 SHMT2P34897 504 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 FKBP1BP68106 108 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 RPP38P78345 283 aaKnown RBP13.56□□□□□ -0.24
COL6A1-201ENST00000361866 MTA1Q13330 715 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 CLCA4Q14CN2 919 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 GPAT3Q53EU6 434 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 KIAA1614Q5VZ46 1190 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 SLC24A5Q71RS6 500 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 ZFAND4Q86XD8 727 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 ARHGAP12Q8IWW6 846 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 ACDQ96AP0 544 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 REPS1Q96D71 796 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 C8orf48Q96LL4 319 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 MCMBPQ9BTE3 642 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 C1QTNF1Q9BXJ1 281 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 ASF1AQ9Y294 204 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 OR6C75A6NL08 312 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 MANBAO00462 879 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 UBFD1O14562 309 aaKnown RBP13.56□□□□□ -0.24
COL6A1-201ENST00000361866 IGFBP6P24592 240 aaPredicted RBP13.56□□□□□ -0.24
COL6A1-201ENST00000361866 SPCS2Q15005 226 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 IFI44LQ53G44 452 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 GCNT6Q5T4J0 391 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 ZNF544Q6NX49 715 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 NEK5Q6P3R8 708 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 SLC22A15Q8IZD6 547 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 MFSD2AQ8NA29 543 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 OR4K1Q8NGD4 311 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 ZNF382Q96SR6 550 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.56□□□□□ -0.24
COL6A1-201ENST00000361866 PLAC1Q9HBJ0 212 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 GTF2A1LQ9UNN4 478 aa13.56□□□□□ -0.24
COL6A1-201ENST00000361866 PCP4L1A6NKN8 68 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 CKBP12277 381 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 BCKDHAP12694 445 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 PPIBP23284 216 aaKnown RBP13.55□□□□□ -0.24
COL6A1-201ENST00000361866 ARCN1P48444 511 aaKnown RBP13.55□□□□□ -0.24
COL6A1-201ENST00000361866 CLCN2P51788 898 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 DEFB115Q30KQ5 88 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 KLHL12Q53G59 568 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 CCBE1Q6UXH8 406 aaPredicted RBP13.55□□□□□ -0.24
COL6A1-201ENST00000361866 ARL14EPQ8N8R7 260 aaPredicted RBP13.55□□□□□ -0.24
COL6A1-201ENST00000361866 C3orf58Q8NDZ4 430 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 OR13J1Q8NGT2 312 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 TSPEARQ8WU66 669 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 TBC1D17Q9HA65 648 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 SEMA3GQ9NS98 782 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 CORO2BQ9UQ03 480 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 KIAA1551Q9HCM1 1747 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 A0A0G2JN53 185 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 H0YC42 278 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 FYNP06241 537 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 GSTM2P28161 218 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 DCTP40126 519 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 NR4A2P43354 598 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 C5orf22Q49AR2 442 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 KCTD11Q693B1 232 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 COLGALT2Q8IYK4 626 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 C1orf52Q8N6N3 182 aaKnown RBP13.55□□□□□ -0.24
COL6A1-201ENST00000361866 ZNF671Q8TAW3 534 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 TBC1D15Q8TC07 691 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 TNFRSF12AQ9NP84 129 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 EQTNQ9NQ60 294 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 ERVK13-1Q9NX77 482 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 PRELID1Q9Y255 219 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.55□□□□□ -0.24
COL6A1-201ENST00000361866 PRAMEF11O60813 436 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 TGFB1P01137 390 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 GSTT2P0CG29 244 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 GSTT2BP0CG30 244 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 CD247P20963 164 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 SRSF11Q05519 484 aaKnown RBP13.55□□□□□ -0.24
COL6A1-201ENST00000361866 SELPLGQ14242 412 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 CRTC2Q53ET0 693 aaPredicted RBP13.55□□□□□ -0.24
COL6A1-201ENST00000361866 FRG2Q64ET8 278 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 FGD2Q7Z6J4 655 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 ZNF280BQ86YH2 543 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 PIANPQ8IYJ0 282 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 UMODL1-AS1Q8N2C9 162 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 KCNJ9Q92806 393 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 EXOSC8Q96B26 276 aaKnown RBP13.55□□□□□ -0.24
COL6A1-201ENST00000361866 L3HYPDHQ96EM0 354 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 FRG2BQ96QU4 278 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 SPG21Q9NZD8 308 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 PCTPQ9UKL6 214 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms