RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 ZNF621Q6ZSS3 439 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 P3H2Q8IVL5 708 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 ENTHD1Q8IYW4 607 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 CACTIN-AS1Q8N1I8 211 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 SVOPQ8N4V2 548 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 SKA2Q8WVK7 121 aaPredicted RBP9.87□□□□□ -0.83
PTPRA-203ENST00000356147 MAL2Q969L2 176 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 EID2BQ96D98 161 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 APOLD1Q96LR9 279 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 CPPED1Q9BRF8 314 aaPredicted RBP9.87□□□□□ -0.83
PTPRA-203ENST00000356147 TNKS2Q9H2K2 1166 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 SERHLQ9NQF3 203 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 AASDHPPTQ9NRN7 309 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 RAD18Q9NS91 495 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 TMEM184CQ9NVA4 438 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 THG1LQ9NWX6 298 aaKnown RBP9.87□□□□□ -0.83
PTPRA-203ENST00000356147 UBA2Q9UBT2 640 aaPredicted RBP9.87□□□□□ -0.83
PTPRA-203ENST00000356147 RNF6Q9Y252 685 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 ARIH1Q9Y4X5 557 aaPredicted RBP9.87□□□□□ -0.83
PTPRA-203ENST00000356147 DYTNA2CJ06 578 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 METTL15A6NJ78 407 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 ANKRD66B4E2M5 251 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 RFXANKO14593 260 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 TFECO14948 347 aaPredicted RBP9.87□□□□□ -0.83
PTPRA-203ENST00000356147 OPN1SWP03999 348 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 NTRK1P04629 796 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 STSP08842 583 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 TACR2P21452 398 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 THPOP40225 353 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 OR1G1P47890 313 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 GRB14Q14449 540 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 PARP15Q460N3 678 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 ATXN7L2Q5T6C5 722 aaPredicted RBP9.87□□□□□ -0.83
PTPRA-203ENST00000356147 USP43Q70EL4 1123 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 TCAIMQ8N3R3 496 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 TRIB2Q92519 343 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 APOL4Q9BPW4 351 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 CLSTN3Q9BQT9 956 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 ACPTQ9BZG2 426 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 CRISPLD1Q9H336 500 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 CLMPQ9H6B4 373 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 PDFQ9HBH1 243 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 THUMPD1Q9NXG2 353 aaKnown RBP9.87□□□□□ -0.83
PTPRA-203ENST00000356147 NUDT4Q9NZJ9 180 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 ITGB1BP2Q9UKP3 347 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 UGT2A1Q9Y4X1 527 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 PCDHGB1Q9Y5G3 927 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 PABPN1LA6NDY0 278 aaKnown RBP9.87□□□□□ -0.83
PTPRA-203ENST00000356147 M0QX08 132 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 SLC25A14O95258 325 aaPredicted RBP9.87□□□□□ -0.83
PTPRA-203ENST00000356147 KRT75O95678 551 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 ITGAMP11215 1152 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 S100A1P23297 94 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 NRIP1P48552 1158 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 MRPL19P49406 292 aaKnown RBP9.87□□□□□ -0.83
PTPRA-203ENST00000356147 RPS14P62263 151 aaKnown RBP9.87□□□□□ -0.83
PTPRA-203ENST00000356147 ZNF772Q68DY9 489 aaPredicted RBP9.87□□□□□ -0.83
PTPRA-203ENST00000356147 KDM4DQ6B0I6 523 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 PLEKHH3Q7Z736 793 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 FAM217AQ8IXS0 508 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 CLECL1Q8IZS7 167 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 AADATQ8N5Z0 425 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 MINDY2Q8NBR6 621 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 UTP15Q8TED0 518 aaKnown RBP9.87□□□□□ -0.83
PTPRA-203ENST00000356147 BRI3BPQ8WY22 251 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 KCNJ9Q92806 393 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 HSH2DQ96JZ2 352 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 NEDD4LQ96PU5 975 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 CDADC1Q9BWV3 514 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 EMILIN2Q9BXX0 1053 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 BEX2Q9BXY8 128 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 ITPAQ9BY32 194 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 GPR63Q9BZJ6 419 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 TM6SF2Q9BZW4 377 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 AP5M1Q9H0R1 490 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 TMEM98Q9Y2Y6 226 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 IFT52Q9Y366 437 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 TESMINQ9Y4I5 508 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 IGLV3-10A0A075B6K4 115 aa9.86□□□□□ -0.83
PTPRA-203ENST00000356147 HAS3O00219 553 aa9.86□□□□□ -0.83
PTPRA-203ENST00000356147 PDYNP01213 254 aa9.86□□□□□ -0.83
PTPRA-203ENST00000356147 EPOP01588 193 aa9.86□□□□□ -0.83
PTPRA-203ENST00000356147 IL6P05231 212 aa9.86□□□□□ -0.83
PTPRA-203ENST00000356147 RETP07949 1114 aa9.86□□□□□ -0.83
PTPRA-203ENST00000356147 SLC10A3P09131 477 aa9.86□□□□□ -0.83
PTPRA-203ENST00000356147 IRF1P10914 325 aa9.86□□□□□ -0.83
PTPRA-203ENST00000356147 HNRNPFP52597 415 aaKnown RBP9.86□□□□□ -0.83
PTPRA-203ENST00000356147 DDX39BQ13838 428 aaKnown RBP9.86□□□□□ -0.83
PTPRA-203ENST00000356147 KIAA1614Q5VZ46 1190 aa9.86□□□□□ -0.83
PTPRA-203ENST00000356147 CAPN13Q6MZZ7 669 aaPredicted RBP9.86□□□□□ -0.83
PTPRA-203ENST00000356147 SNX20Q7Z614 316 aa9.86□□□□□ -0.83
PTPRA-203ENST00000356147 ADGRG2Q8IZP9 1017 aa9.86□□□□□ -0.83
PTPRA-203ENST00000356147 OR8H2Q8N162 312 aa9.86□□□□□ -0.83
PTPRA-203ENST00000356147 UBE2J2Q8N2K1 259 aa9.86□□□□□ -0.83
PTPRA-203ENST00000356147 SELENOMQ8WWX9 145 aa9.86□□□□□ -0.83
PTPRA-203ENST00000356147 SLC38A4Q969I6 547 aa9.86□□□□□ -0.83
PTPRA-203ENST00000356147 TXNDC15Q96J42 360 aa9.86□□□□□ -0.83
PTPRA-203ENST00000356147 NACA2Q9H009 215 aa9.86□□□□□ -0.83
PTPRA-203ENST00000356147 RERGLQ9H628 205 aa9.86□□□□□ -0.83
PTPRA-203ENST00000356147 GABRQQ9UN88 632 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms